RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MINK1Q8N4C8 1332 aaPredicted RBP30.01■■■□□ 2.39
CASC4-204ENST00000557945 C19orf44Q9H6X5 657 aa30.01■■■□□ 2.39
CASC4-204ENST00000557945 ADGRL3Q9HAR2 1447 aa30■■■□□ 2.39
CASC4-204ENST00000557945 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
CASC4-204ENST00000557945 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.98■■■□□ 2.39
CASC4-204ENST00000557945 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
CASC4-204ENST00000557945 IQSEC2Q5JU85 1478 aa29.96■■■□□ 2.39
CASC4-204ENST00000557945 ST20-MTHFSA0A0A6YYL1 179 aa29.95■■■□□ 2.39
CASC4-204ENST00000557945 ATF3P18847 181 aa29.95■■■□□ 2.39
CASC4-204ENST00000557945 EIF4G2P78344 907 aaKnown RBP eCLIP29.94■■■□□ 2.38
CASC4-204ENST00000557945 QRICH2Q9H0J4 1663 aa29.93■■■□□ 2.38
CASC4-204ENST00000557945 CADPS2Q86UW7 1296 aa29.91■■■□□ 2.38
CASC4-204ENST00000557945 HSPA5P11021 654 aaKnown RBP29.9■■■□□ 2.38
CASC4-204ENST00000557945 DCCP43146 1447 aa29.88■■■□□ 2.37
CASC4-204ENST00000557945 UBAP1LF5GYI3 381 aa29.88■■■□□ 2.37
CASC4-204ENST00000557945 CDC42BPGQ6DT37 1551 aa29.87■■■□□ 2.37
CASC4-204ENST00000557945 TOM1O60784 492 aa29.87■■■□□ 2.37
CASC4-204ENST00000557945 WASLO00401 505 aaPredicted RBP29.86■■■□□ 2.37
CASC4-204ENST00000557945 ADGRB2O60241 1585 aa29.85■■■□□ 2.37
CASC4-204ENST00000557945 NUTM2FA1L443 756 aa29.85■■■□□ 2.37
CASC4-204ENST00000557945 CDK19Q9BWU1 502 aa29.84■■■□□ 2.37
CASC4-204ENST00000557945 SBNO2Q9Y2G9 1366 aa29.84■■■□□ 2.37
CASC4-204ENST00000557945 TESK2Q96S53 571 aa29.83■■■□□ 2.37
CASC4-204ENST00000557945 EVC2Q86UK5 1308 aa29.83■■■□□ 2.37
CASC4-204ENST00000557945 SLAIN2Q9P270 581 aa29.82■■■□□ 2.36
CASC4-204ENST00000557945 SRPK2P78362 688 aaKnown RBP29.81■■■□□ 2.36
CASC4-204ENST00000557945 SLC24A1O60721 1099 aa29.79■■■□□ 2.36
CASC4-204ENST00000557945 MST1RQ04912 1400 aa29.79■■■□□ 2.36
CASC4-204ENST00000557945 TULP4Q9NRJ4 1543 aa29.78■■■□□ 2.36
CASC4-204ENST00000557945 SCAF1Q9H7N4 1312 aaKnown RBP29.78■■■□□ 2.36
CASC4-204ENST00000557945 PIP4K2BP78356 416 aa29.77■■■□□ 2.36
CASC4-204ENST00000557945 CABP2Q9NPB3 220 aa29.77■■■□□ 2.36
CASC4-204ENST00000557945 FMN2Q9NZ56 1722 aa29.77■■■□□ 2.36
CASC4-204ENST00000557945 TMF1P82094 1093 aa29.77■■■□□ 2.36
CASC4-204ENST00000557945 C1orf167Q5SNV9 1468 aa29.75■■■□□ 2.35
CASC4-204ENST00000557945 NUDT16Q96DE0 195 aaKnown RBP29.74■■■□□ 2.35
CASC4-204ENST00000557945 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
CASC4-204ENST00000557945 ANKARQ7Z5J8 1434 aa29.72■■■□□ 2.35
CASC4-204ENST00000557945 DISP3Q9P2K9 1392 aa29.72■■■□□ 2.35
CASC4-204ENST00000557945 PRR36Q9H6K5 1346 aa29.71■■■□□ 2.35
CASC4-204ENST00000557945 ORAI2Q96SN7 254 aa29.7■■■□□ 2.35
CASC4-204ENST00000557945 ATP7BP35670 1465 aa29.67■■■□□ 2.34
CASC4-204ENST00000557945 CDCA8Q53HL2 280 aa29.67■■■□□ 2.34
CASC4-204ENST00000557945 BRINP3Q76B58 766 aa29.67■■■□□ 2.34
CASC4-204ENST00000557945 USP32Q8NFA0 1604 aa29.67■■■□□ 2.34
CASC4-204ENST00000557945 CCDC61Q9Y6R9 512 aa29.66■■■□□ 2.34
CASC4-204ENST00000557945 ATAD2Q6PL18 1390 aa29.65■■■□□ 2.34
CASC4-204ENST00000557945 RGPD8O14715 1765 aaPredicted RBP29.65■■■□□ 2.34
CASC4-204ENST00000557945 POLR3GLQ9BT43 218 aa29.64■■■□□ 2.34
CASC4-204ENST00000557945 PHF8Q9UPP1 1060 aa29.64■■■□□ 2.34
CASC4-204ENST00000557945 PMFBP1Q8TBY8 1022 aa29.64■■■□□ 2.33
CASC4-204ENST00000557945 PUS7Q96PZ0 661 aaKnown RBP29.63■■■□□ 2.33
CASC4-204ENST00000557945 ROBO1Q9Y6N7 1651 aa29.62■■■□□ 2.33
CASC4-204ENST00000557945 FBXO41Q8TF61 875 aa29.62■■■□□ 2.33
CASC4-204ENST00000557945 TMC1Q8TDI8 760 aa29.61■■■□□ 2.33
CASC4-204ENST00000557945 PPIP5K1Q6PFW1 1433 aa29.6■■■□□ 2.33
CASC4-204ENST00000557945 CABP1Q9NZU7 370 aa29.6■■■□□ 2.33
CASC4-204ENST00000557945 C11orf95C9JLR9 678 aaPredicted RBP29.59■■■□□ 2.33
CASC4-204ENST00000557945 ITSN1Q15811 1721 aa29.58■■■□□ 2.33
CASC4-204ENST00000557945 NGDNQ8NEJ9 315 aaKnown RBP29.58■■■□□ 2.33
CASC4-204ENST00000557945 FOXO3O43524 673 aa29.57■■■□□ 2.32
CASC4-204ENST00000557945 PLEKHG3A1L390 1219 aa29.56■■■□□ 2.32
CASC4-204ENST00000557945 DDX17Q92841 729 aaKnown RBP29.56■■■□□ 2.32
CASC4-204ENST00000557945 TOPAZ1Q8N9V7 1692 aa29.56■■■□□ 2.32
CASC4-204ENST00000557945 KIF1AQ12756 1690 aa29.55■■■□□ 2.32
CASC4-204ENST00000557945 SLC12A5Q9H2X9 1139 aa29.53■■■□□ 2.32
CASC4-204ENST00000557945 ACEP12821 1306 aa29.53■■■□□ 2.32
CASC4-204ENST00000557945 NPHP3Q7Z494 1330 aa29.53■■■□□ 2.32
CASC4-204ENST00000557945 KIF7Q2M1P5 1343 aa29.52■■■□□ 2.32
CASC4-204ENST00000557945 XPCQ01831 940 aaPredicted RBP29.52■■■□□ 2.32
CASC4-204ENST00000557945 PSME1Q06323 249 aa29.52■■■□□ 2.32
CASC4-204ENST00000557945 NINLQ9Y2I6 1382 aa29.49■■■□□ 2.31
CASC4-204ENST00000557945 KRT28Q7Z3Y7 464 aa29.48■■■□□ 2.31
CASC4-204ENST00000557945 POLR3AO14802 1390 aaPredicted RBP29.48■■■□□ 2.31
CASC4-204ENST00000557945 CCDC7Q96M83 1385 aa29.47■■■□□ 2.31
CASC4-204ENST00000557945 AHDC1Q5TGY3 1603 aaPredicted RBP29.47■■■□□ 2.31
CASC4-204ENST00000557945 WASHC2AQ641Q2 1341 aa29.46■■■□□ 2.31
CASC4-204ENST00000557945 HSPA1LP34931 641 aa29.46■■■□□ 2.31
CASC4-204ENST00000557945 HDGFL2Q7Z4V5 671 aaPredicted RBP29.46■■■□□ 2.31
CASC4-204ENST00000557945 NHSL1Q5SYE7 1610 aa29.46■■■□□ 2.31
CASC4-204ENST00000557945 TERF2IPQ9NYB0 399 aa29.45■■■□□ 2.31
CASC4-204ENST00000557945 PHLPP1O60346 1717 aa29.44■■■□□ 2.3
CASC4-204ENST00000557945 ZNF692Q9BU19 519 aaPredicted RBP29.43■■■□□ 2.3
CASC4-204ENST00000557945 SOS2Q07890 1332 aaPredicted RBP29.43■■■□□ 2.3
CASC4-204ENST00000557945 PXDNQ92626 1479 aa29.42■■■□□ 2.3
CASC4-204ENST00000557945 KTN1Q86UP2 1357 aaKnown RBP29.41■■■□□ 2.3
CASC4-204ENST00000557945 PAK3O75914 559 aaPredicted RBP29.4■■■□□ 2.3
CASC4-204ENST00000557945 CD163L1Q9NR16 1453 aa29.4■■■□□ 2.3
CASC4-204ENST00000557945 MYOM1P52179 1685 aa29.4■■■□□ 2.3
CASC4-204ENST00000557945 CPSF1Q10570 1443 aaKnown RBP29.4■■■□□ 2.3
CASC4-204ENST00000557945 A0A1W2PP64 1363 aa29.39■■■□□ 2.3
CASC4-204ENST00000557945 ANKRD36BQ8N2N9 1353 aa29.38■■■□□ 2.29
CASC4-204ENST00000557945 USP6P35125 1406 aa29.38■■■□□ 2.29
CASC4-204ENST00000557945 LRRC59Q96AG4 307 aaKnown RBP29.37■■■□□ 2.29
CASC4-204ENST00000557945 LMOD2Q6P5Q4 547 aa29.36■■■□□ 2.29
CASC4-204ENST00000557945 COL16A1Q07092 1604 aaPredicted RBP29.36■■■□□ 2.29
CASC4-204ENST00000557945 AKAP12Q02952 1782 aa29.35■■■□□ 2.29
CASC4-204ENST00000557945 ZNF316A6NFI3 1004 aaPredicted RBP29.35■■■□□ 2.29
CASC4-204ENST00000557945 SBNO1A3KN83 1393 aa29.35■■■□□ 2.29
CASC4-204ENST00000557945 PANK3Q9H999 370 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms