RNA–Protein interactions for RNA: ENST00000557847.1

AP001007.3-202, humanhuman

TSL 3

Gene AP001007.3, Length 334 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-202ENST00000557847 XRN1Q8IZH2 1706 aaKnown RBP9.42□□□□□ -0.9
AP001007.3-202ENST00000557847 GLI3P10071 1580 aa9.41□□□□□ -0.9
AP001007.3-202ENST00000557847 KRT27Q7Z3Y8 459 aa9.41□□□□□ -0.9
AP001007.3-202ENST00000557847 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.41□□□□□ -0.9
AP001007.3-202ENST00000557847 DISP2A7MBM2 1401 aa9.4□□□□□ -0.9
AP001007.3-202ENST00000557847 VPS72Q15906 364 aa9.4□□□□□ -0.9
AP001007.3-202ENST00000557847 ORAI2Q96SN7 254 aa9.4□□□□□ -0.9
AP001007.3-202ENST00000557847 NPHP3Q7Z494 1330 aa9.39□□□□□ -0.91
AP001007.3-202ENST00000557847 R3HDM1Q15032 1099 aaKnown RBP9.39□□□□□ -0.91
AP001007.3-202ENST00000557847 ANKRD30AQ9BXX3 1397 aa9.38□□□□□ -0.91
AP001007.3-202ENST00000557847 PTPN23Q9H3S7 1636 aa9.38□□□□□ -0.91
AP001007.3-202ENST00000557847 METP08581 1390 aa9.37□□□□□ -0.91
AP001007.3-202ENST00000557847 GCC2Q8IWJ2 1684 aa9.37□□□□□ -0.91
AP001007.3-202ENST00000557847 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
AP001007.3-202ENST00000557847 SLC4A1APQ9BWU0 796 aaKnown RBP9.37□□□□□ -0.91
AP001007.3-202ENST00000557847 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
AP001007.3-202ENST00000557847 ZNF784Q8NCA9 323 aaPredicted RBP9.36□□□□□ -0.91
AP001007.3-202ENST00000557847 PRAG1Q86YV5 1406 aa9.36□□□□□ -0.91
AP001007.3-202ENST00000557847 MARF1Q9Y4F3 1742 aaKnown RBP9.36□□□□□ -0.91
AP001007.3-202ENST00000557847 NINLQ9Y2I6 1382 aa9.36□□□□□ -0.91
AP001007.3-202ENST00000557847 MYO5BQ9ULV0 1848 aa9.35□□□□□ -0.91
AP001007.3-202ENST00000557847 SENP3-EIF4A1A0A087X0R7 540 aa9.35□□□□□ -0.91
AP001007.3-202ENST00000557847 CHGAP10645 457 aaKnown RBP9.35□□□□□ -0.91
AP001007.3-202ENST00000557847 DAPK1P53355 1430 aa9.35□□□□□ -0.91
AP001007.3-202ENST00000557847 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
AP001007.3-202ENST00000557847 PARD3Q8TEW0 1356 aa9.35□□□□□ -0.91
AP001007.3-202ENST00000557847 NRXN3Q9Y4C0 1643 aa9.34□□□□□ -0.91
AP001007.3-202ENST00000557847 PXDNQ92626 1479 aa9.34□□□□□ -0.91
AP001007.3-202ENST00000557847 BRWD3Q6RI45 1802 aa9.34□□□□□ -0.91
AP001007.3-202ENST00000557847 CACNB1Q02641 598 aaPredicted RBP9.34□□□□□ -0.91
AP001007.3-202ENST00000557847 CAMKK2Q96RR4 588 aa9.34□□□□□ -0.91
AP001007.3-202ENST00000557847 ADGRL2O95490 1459 aa9.33□□□□□ -0.92
AP001007.3-202ENST00000557847 CROCC2H7BZ55 1655 aa9.32□□□□□ -0.92
AP001007.3-202ENST00000557847 NALCNQ8IZF0 1738 aa9.32□□□□□ -0.92
AP001007.3-202ENST00000557847 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 FOXO3O43524 673 aa9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 SPON1Q9HCB6 807 aa9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 HFM1A2PYH4 1435 aa9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 ANKRD50Q9ULJ7 1429 aa9.31□□□□□ -0.92
AP001007.3-202ENST00000557847 KCNQ2O43526 872 aa9.3□□□□□ -0.92
AP001007.3-202ENST00000557847 SLC4A2P04920 1241 aa9.3□□□□□ -0.92
AP001007.3-202ENST00000557847 KANK4Q5T7N3 995 aaPredicted RBP9.3□□□□□ -0.92
AP001007.3-202ENST00000557847 IQGAP3Q86VI3 1631 aa9.3□□□□□ -0.92
AP001007.3-202ENST00000557847 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
AP001007.3-202ENST00000557847 RGPD1P0DJD0 1748 aa9.29□□□□□ -0.92
AP001007.3-202ENST00000557847 NBPF8Q3BBV2 869 aa9.29□□□□□ -0.92
AP001007.3-202ENST00000557847 NBPF14Q5TI25 921 aa9.29□□□□□ -0.92
AP001007.3-202ENST00000557847 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
AP001007.3-202ENST00000557847 NWD2Q9ULI1 1742 aa9.28□□□□□ -0.92
AP001007.3-202ENST00000557847 USP32Q8NFA0 1604 aa9.27□□□□□ -0.92
AP001007.3-202ENST00000557847 FAM196AQ6ZSG2 479 aa9.27□□□□□ -0.93
AP001007.3-202ENST00000557847 PPP1R1BQ9UD71 204 aaPredicted RBP9.27□□□□□ -0.93
AP001007.3-202ENST00000557847 FAM98CQ17RN3 349 aaKnown RBP9.26□□□□□ -0.93
AP001007.3-202ENST00000557847 CCDC9Q9Y3X0 531 aaKnown RBP9.26□□□□□ -0.93
AP001007.3-202ENST00000557847 FAM83GA6ND36 823 aa9.25□□□□□ -0.93
AP001007.3-202ENST00000557847 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
AP001007.3-202ENST00000557847 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 CCDC144AA2RUR9 1427 aa9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 E9PCH4 1651 aa9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
AP001007.3-202ENST00000557847 TNS1Q9HBL0 1735 aaKnown RBP9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 APBA3O96018 575 aa9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 PSME1Q06323 249 aa9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 SPATA31A5Q5VU36 1347 aa9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 SPATA31A7Q8IWB4 1347 aa9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 SBNO1A3KN83 1393 aa9.23□□□□□ -0.93
AP001007.3-202ENST00000557847 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
AP001007.3-202ENST00000557847 TRIM37O94972 964 aa9.22□□□□□ -0.93
AP001007.3-202ENST00000557847 UTRNP46939 3433 aa9.21□□□□□ -0.93
AP001007.3-202ENST00000557847 NEXMIFQ5QGS0 1516 aa9.21□□□□□ -0.93
AP001007.3-202ENST00000557847 A0A0G2JS52 829 aa9.21□□□□□ -0.94
AP001007.3-202ENST00000557847 HAP1P54257 671 aaPredicted RBP9.21□□□□□ -0.94
AP001007.3-202ENST00000557847 MYT1Q01538 1121 aa9.21□□□□□ -0.94
AP001007.3-202ENST00000557847 FAM182BQ5T319 152 aa9.21□□□□□ -0.94
AP001007.3-202ENST00000557847 ARHGEF10O15013 1369 aa9.21□□□□□ -0.94
AP001007.3-202ENST00000557847 TNS3Q68CZ2 1445 aa9.21□□□□□ -0.94
AP001007.3-202ENST00000557847 C11orf95C9JLR9 678 aaPredicted RBP9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 BTG4Q9NY30 223 aa9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 RPGRIP1LQ68CZ1 1315 aa9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 RRBP1Q9P2E9 1410 aaKnown RBP9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 PLCH1Q4KWH8 1693 aa9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 RREB1Q92766 1687 aa9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 THSD7AQ9UPZ6 1657 aa9.2□□□□□ -0.94
AP001007.3-202ENST00000557847 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
AP001007.3-202ENST00000557847 SYT17Q9BSW7 474 aa9.19□□□□□ -0.94
AP001007.3-202ENST00000557847 TECPR2O15040 1411 aa9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 PLSCR1O15162 318 aa9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 GIGYF1O75420 1035 aaPredicted RBP9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 NUP155O75694 1391 aa9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 PTGER2P43116 358 aa9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 NAIPQ13075 1403 aa9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
AP001007.3-202ENST00000557847 NRAPQ86VF7 1730 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms