RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
TDP1-217ENST00000557782 ADAM33Q9BZ11 813 aa5.9□□□□□ -1.46
TDP1-217ENST00000557782 IGSF5Q9NSI5 407 aa5.9□□□□□ -1.46
TDP1-217ENST00000557782 KDM4FA0A1W2PPD8 638 aa5.89□□□□□ -1.47
TDP1-217ENST00000557782 TBC1D9Q6ZT07 1266 aa5.89□□□□□ -1.47
TDP1-217ENST00000557782 NUDT18Q6ZVK8 323 aa5.89□□□□□ -1.47
TDP1-217ENST00000557782 TXNDC2Q86VQ3 553 aa5.89□□□□□ -1.47
TDP1-217ENST00000557782 LRRN4Q8WUT4 740 aa5.89□□□□□ -1.47
TDP1-217ENST00000557782 FAM198AQ9UFP1 575 aa5.89□□□□□ -1.47
TDP1-217ENST00000557782 ARID4AP29374 1257 aaPredicted RBP5.88□□□□□ -1.47
TDP1-217ENST00000557782 SLF2Q8IX21 1173 aa5.88□□□□□ -1.47
TDP1-217ENST00000557782 PNMA3Q9UL41 463 aa5.88□□□□□ -1.47
TDP1-217ENST00000557782 GCGRP47871 477 aa5.87□□□□□ -1.47
TDP1-217ENST00000557782 TMEM164Q5U3C3 297 aa5.87□□□□□ -1.47
TDP1-217ENST00000557782 SIRT1Q96EB6 747 aa5.87□□□□□ -1.47
TDP1-217ENST00000557782 NOVA2Q9UNW9 492 aaKnown RBP5.87□□□□□ -1.47
TDP1-217ENST00000557782 DNAJC14Q6Y2X3 702 aaPredicted RBP5.86□□□□□ -1.47
TDP1-217ENST00000557782 PACS2Q86VP3 889 aa5.86□□□□□ -1.47
TDP1-217ENST00000557782 TATDN2Q93075 761 aa5.86□□□□□ -1.47
TDP1-217ENST00000557782 BCL2L13Q9BXK5 485 aa5.86□□□□□ -1.47
TDP1-217ENST00000557782 TSKSQ9UJT2 592 aa5.86□□□□□ -1.47
TDP1-217ENST00000557782 ZMIZ1Q9ULJ6 1067 aa5.86□□□□□ -1.47
TDP1-217ENST00000557782 PCDHGC3Q9UN70 934 aa5.86□□□□□ -1.47
TDP1-217ENST00000557782 COLQQ9Y215 455 aaPredicted RBP5.86□□□□□ -1.47
TDP1-217ENST00000557782 PPP1R3GB7ZBB8 358 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 C6orf229H3BNL8 230 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 GRIPAP1Q4V328 841 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 KANK4Q5T7N3 995 aaPredicted RBP5.85□□□□□ -1.47
TDP1-217ENST00000557782 NFATC2IPQ8NCF5 419 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 EPS8L1Q8TE68 723 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 STK32AQ8WU08 396 aa5.85□□□□□ -1.47
TDP1-217ENST00000557782 KIAA1522Q9P206 1035 aaPredicted RBP5.85□□□□□ -1.47
TDP1-217ENST00000557782 CFAP99D6REC4 459 aa5.84□□□□□ -1.47
TDP1-217ENST00000557782 ZNF16P17020 682 aaPredicted RBP5.84□□□□□ -1.47
TDP1-217ENST00000557782 NR1H3Q13133 447 aa5.84□□□□□ -1.47
TDP1-217ENST00000557782 NR6A1Q15406 480 aa5.84□□□□□ -1.47
TDP1-217ENST00000557782 USP17L3A6NCW0 530 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 USP17L4A6NCW7 530 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 SOWAHDA6NJG2 315 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 FAM196BA6NMK8 535 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 TRIM6-TRIM34B2RNG4 842 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 NUDT7P0C024 238 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 TCF3P15923 654 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 COL9A1P20849 921 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 SSFA2P28290 1259 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 MARSP56192 900 aaKnown RBP5.83□□□□□ -1.48
TDP1-217ENST00000557782 USP17L2Q6R6M4 530 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 USP17L1Q7RTZ2 530 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 SLC39A7Q92504 469 aa5.83□□□□□ -1.48
TDP1-217ENST00000557782 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.83□□□□□ -1.48
TDP1-217ENST00000557782 USP17L15C9J2P7 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L10C9JJH3 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L13C9JLJ4 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L12C9JPN9 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L11C9JVI0 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L21D6R901 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L18D6R9N7 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L22D6RA61 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L17D6RBQ6 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L19D6RCP7 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L20D6RJB6 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 SKIP12755 728 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 PTPREP23469 700 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 USP17L24Q0WX57 530 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 ZNF326Q5BKZ1 582 aaKnown RBP5.82□□□□□ -1.48
TDP1-217ENST00000557782 PPP4R3BQ5MIZ7 849 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 PHLDB3Q6NSJ2 640 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 LARP1Q6PKG0 1096 aaKnown RBP5.82□□□□□ -1.48
TDP1-217ENST00000557782 PLEKHM2Q8IWE5 1019 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 GIPC2Q8TF65 315 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 HLA-CQ95604 372 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 BCL11AQ9H165 835 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 BCL2L12Q9HB09 334 aa5.82□□□□□ -1.48
TDP1-217ENST00000557782 BIN2Q9UBW5 565 aaPredicted RBP5.82□□□□□ -1.48
TDP1-217ENST00000557782 PSDA5PKW4 1024 aaPredicted RBP5.81□□□□□ -1.48
TDP1-217ENST00000557782 USP17L5A8MUK1 530 aa5.81□□□□□ -1.48
TDP1-217ENST00000557782 SLC4A3P48751 1232 aa5.81□□□□□ -1.48
TDP1-217ENST00000557782 FAM177A1Q8N128 213 aaPredicted RBP5.81□□□□□ -1.48
TDP1-217ENST00000557782 FAM200AQ8TCP9 573 aa5.81□□□□□ -1.48
TDP1-217ENST00000557782 CLP1Q92989 425 aaKnown RBP5.81□□□□□ -1.48
TDP1-217ENST00000557782 C8orf37Q96NL8 207 aa5.81□□□□□ -1.48
TDP1-217ENST00000557782 ZBBXA8MT70 800 aa5.8□□□□□ -1.48
TDP1-217ENST00000557782 C3orf80F5H4A9 247 aa5.8□□□□□ -1.48
TDP1-217ENST00000557782 PIK3CDO00329 1044 aa5.8□□□□□ -1.48
TDP1-217ENST00000557782 ZNF592Q92610 1267 aa5.8□□□□□ -1.48
TDP1-217ENST00000557782 DRC1Q96MC2 740 aa5.8□□□□□ -1.48
TDP1-217ENST00000557782 ATP5J2-PTCD1G3V325 749 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 SMAPO00193 183 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 RIMBP2O15034 1052 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 C7P10643 843 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 ATP2B4P23634 1241 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 CANXP27824 592 aaKnown RBP5.79□□□□□ -1.48
TDP1-217ENST00000557782 SERPINB4P48594 390 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 DOK7Q18PE1 504 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 CCDC125Q86Z20 511 aa5.79□□□□□ -1.48
TDP1-217ENST00000557782 SREK1Q8WXA9 508 aaKnown RBP5.79□□□□□ -1.48
TDP1-217ENST00000557782 CDCA7Q9BWT1 371 aaPredicted RBP5.79□□□□□ -1.48
TDP1-217ENST00000557782 MKRN1Q9UHC7 482 aaKnown RBP5.79□□□□□ -1.48
TDP1-217ENST00000557782 ANKRD33BA6NCL7 494 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms