RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
CGRRF1-209ENST00000557755 SF3B2Q13435 895 aaKnown RBP17.49■□□□□ 0.39
CGRRF1-209ENST00000557755 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
CGRRF1-209ENST00000557755 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
CGRRF1-209ENST00000557755 YY1P25490 414 aa17.47■□□□□ 0.39
CGRRF1-209ENST00000557755 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
CGRRF1-209ENST00000557755 UNC5CLQ8IV45 518 aa17.45■□□□□ 0.38
CGRRF1-209ENST00000557755 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
CGRRF1-209ENST00000557755 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
CGRRF1-209ENST00000557755 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
CGRRF1-209ENST00000557755 PXDNQ92626 1479 aa17.43■□□□□ 0.38
CGRRF1-209ENST00000557755 SLIT2O94813 1529 aa17.42■□□□□ 0.38
CGRRF1-209ENST00000557755 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
CGRRF1-209ENST00000557755 EN1Q05925 392 aaPredicted RBP17.4■□□□□ 0.38
CGRRF1-209ENST00000557755 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
CGRRF1-209ENST00000557755 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.38
CGRRF1-209ENST00000557755 FOXO3O43524 673 aa17.39■□□□□ 0.37
CGRRF1-209ENST00000557755 BAG6P46379 1132 aa17.38■□□□□ 0.37
CGRRF1-209ENST00000557755 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
CGRRF1-209ENST00000557755 KRT27Q7Z3Y8 459 aa17.38■□□□□ 0.37
CGRRF1-209ENST00000557755 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
CGRRF1-209ENST00000557755 FAM182BQ5T319 152 aa17.36■□□□□ 0.37
CGRRF1-209ENST00000557755 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
CGRRF1-209ENST00000557755 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
CGRRF1-209ENST00000557755 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
CGRRF1-209ENST00000557755 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
CGRRF1-209ENST00000557755 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
CGRRF1-209ENST00000557755 USP32Q8NFA0 1604 aa17.34■□□□□ 0.37
CGRRF1-209ENST00000557755 VPS72Q15906 364 aa17.33■□□□□ 0.36
CGRRF1-209ENST00000557755 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
CGRRF1-209ENST00000557755 A0A0G2JS52 829 aa17.32■□□□□ 0.36
CGRRF1-209ENST00000557755 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
CGRRF1-209ENST00000557755 MYT1Q01538 1121 aa17.32■□□□□ 0.36
CGRRF1-209ENST00000557755 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
CGRRF1-209ENST00000557755 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
CGRRF1-209ENST00000557755 EZH2Q15910 746 aaKnown RBP17.29■□□□□ 0.36
CGRRF1-209ENST00000557755 NUP155O75694 1391 aa17.28■□□□□ 0.36
CGRRF1-209ENST00000557755 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
CGRRF1-209ENST00000557755 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
CGRRF1-209ENST00000557755 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
CGRRF1-209ENST00000557755 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
CGRRF1-209ENST00000557755 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
CGRRF1-209ENST00000557755 CDC42BPGQ6DT37 1551 aa17.27■□□□□ 0.35
CGRRF1-209ENST00000557755 CLTCL1P53675 1640 aa17.26■□□□□ 0.35
CGRRF1-209ENST00000557755 NWD2Q9ULI1 1742 aa17.25■□□□□ 0.35
CGRRF1-209ENST00000557755 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
CGRRF1-209ENST00000557755 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
CGRRF1-209ENST00000557755 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
CGRRF1-209ENST00000557755 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
CGRRF1-209ENST00000557755 ABCA3Q99758 1704 aa17.23■□□□□ 0.35
CGRRF1-209ENST00000557755 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
CGRRF1-209ENST00000557755 NAIPQ13075 1403 aa17.21■□□□□ 0.35
CGRRF1-209ENST00000557755 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
CGRRF1-209ENST00000557755 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
CGRRF1-209ENST00000557755 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
CGRRF1-209ENST00000557755 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
CGRRF1-209ENST00000557755 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
CGRRF1-209ENST00000557755 DISP2A7MBM2 1401 aa17.21■□□□□ 0.34
CGRRF1-209ENST00000557755 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
CGRRF1-209ENST00000557755 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
CGRRF1-209ENST00000557755 APLP2Q06481 763 aa17.19■□□□□ 0.34
CGRRF1-209ENST00000557755 RGPD8O14715 1765 aaPredicted RBP17.18■□□□□ 0.34
CGRRF1-209ENST00000557755 TRIM37O94972 964 aa17.18■□□□□ 0.34
CGRRF1-209ENST00000557755 KIF1BO60333 1816 aa17.18■□□□□ 0.34
CGRRF1-209ENST00000557755 ZNF784Q8NCA9 323 aaPredicted RBP17.17■□□□□ 0.34
CGRRF1-209ENST00000557755 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
CGRRF1-209ENST00000557755 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
CGRRF1-209ENST00000557755 TNS3Q68CZ2 1445 aa17.16■□□□□ 0.34
CGRRF1-209ENST00000557755 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
CGRRF1-209ENST00000557755 STK26Q9P289 416 aa17.16■□□□□ 0.34
CGRRF1-209ENST00000557755 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
CGRRF1-209ENST00000557755 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
CGRRF1-209ENST00000557755 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
CGRRF1-209ENST00000557755 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
CGRRF1-209ENST00000557755 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
CGRRF1-209ENST00000557755 RREB1Q92766 1687 aa17.13■□□□□ 0.33
CGRRF1-209ENST00000557755 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
CGRRF1-209ENST00000557755 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
CGRRF1-209ENST00000557755 APBA3O96018 575 aa17.13■□□□□ 0.33
CGRRF1-209ENST00000557755 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
CGRRF1-209ENST00000557755 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
CGRRF1-209ENST00000557755 PPLO60437 1756 aa17.1■□□□□ 0.33
CGRRF1-209ENST00000557755 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
CGRRF1-209ENST00000557755 SPON1Q9HCB6 807 aa17.1■□□□□ 0.33
CGRRF1-209ENST00000557755 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
CGRRF1-209ENST00000557755 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
CGRRF1-209ENST00000557755 ITGAEP38570 1179 aa17.09■□□□□ 0.33
CGRRF1-209ENST00000557755 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
CGRRF1-209ENST00000557755 KCNQ2O43526 872 aa17.08■□□□□ 0.32
CGRRF1-209ENST00000557755 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
CGRRF1-209ENST00000557755 C1QTNF8P60827 252 aa17.07■□□□□ 0.32
CGRRF1-209ENST00000557755 PSME1Q06323 249 aa17.06■□□□□ 0.32
CGRRF1-209ENST00000557755 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
CGRRF1-209ENST00000557755 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
CGRRF1-209ENST00000557755 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
CGRRF1-209ENST00000557755 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
CGRRF1-209ENST00000557755 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
CGRRF1-209ENST00000557755 TECPR2O15040 1411 aa17.04■□□□□ 0.32
CGRRF1-209ENST00000557755 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
CGRRF1-209ENST00000557755 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms