RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ATMINO43313 823 aaPredicted RBP13.19□□□□□ -0.3
CHD8-214ENST00000557727 NUTM2DQ5VT03 806 aaPredicted RBP13.19□□□□□ -0.3
CHD8-214ENST00000557727 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
CHD8-214ENST00000557727 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
CHD8-214ENST00000557727 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
CHD8-214ENST00000557727 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
CHD8-214ENST00000557727 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
CHD8-214ENST00000557727 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
CHD8-214ENST00000557727 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
CHD8-214ENST00000557727 ADGRF5Q8IZF2 1346 aa13.17□□□□□ -0.3
CHD8-214ENST00000557727 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
CHD8-214ENST00000557727 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
CHD8-214ENST00000557727 ZNF326Q5BKZ1 582 aaKnown RBP13.17□□□□□ -0.3
CHD8-214ENST00000557727 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHD8-214ENST00000557727 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
CHD8-214ENST00000557727 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
CHD8-214ENST00000557727 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
CHD8-214ENST00000557727 LAMC1P11047 1609 aa13.15□□□□□ -0.3
CHD8-214ENST00000557727 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
CHD8-214ENST00000557727 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
CHD8-214ENST00000557727 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
CHD8-214ENST00000557727 C7P10643 843 aa13.14□□□□□ -0.31
CHD8-214ENST00000557727 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
CHD8-214ENST00000557727 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
CHD8-214ENST00000557727 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
CHD8-214ENST00000557727 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
CHD8-214ENST00000557727 METP08581 1390 aa13.13□□□□□ -0.31
CHD8-214ENST00000557727 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
CHD8-214ENST00000557727 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
CHD8-214ENST00000557727 FKBP8Q14318 412 aa13.13□□□□□ -0.31
CHD8-214ENST00000557727 SLC26A8Q96RN1 970 aa13.13□□□□□ -0.31
CHD8-214ENST00000557727 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
CHD8-214ENST00000557727 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
CHD8-214ENST00000557727 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
CHD8-214ENST00000557727 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
CHD8-214ENST00000557727 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
CHD8-214ENST00000557727 PRAG1Q86YV5 1406 aa13.12□□□□□ -0.31
CHD8-214ENST00000557727 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
CHD8-214ENST00000557727 TRPM1Q7Z4N2 1603 aa13.11□□□□□ -0.31
CHD8-214ENST00000557727 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
CHD8-214ENST00000557727 DCAF11Q8TEB1 546 aa13.1□□□□□ -0.31
CHD8-214ENST00000557727 PIK3R4Q99570 1358 aa13.09□□□□□ -0.31
CHD8-214ENST00000557727 MAP3K13O43283 966 aa13.09□□□□□ -0.31
CHD8-214ENST00000557727 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
CHD8-214ENST00000557727 CPS1P31327 1500 aa13.08□□□□□ -0.31
CHD8-214ENST00000557727 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
CHD8-214ENST00000557727 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
CHD8-214ENST00000557727 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
CHD8-214ENST00000557727 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
CHD8-214ENST00000557727 KCNA6P17658 529 aa13.06□□□□□ -0.32
CHD8-214ENST00000557727 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
CHD8-214ENST00000557727 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
CHD8-214ENST00000557727 TECPR2O15040 1411 aa13.05□□□□□ -0.32
CHD8-214ENST00000557727 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
CHD8-214ENST00000557727 TIE1P35590 1138 aa13.05□□□□□ -0.32
CHD8-214ENST00000557727 NUBP1P53384 320 aa13.05□□□□□ -0.32
CHD8-214ENST00000557727 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
CHD8-214ENST00000557727 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
CHD8-214ENST00000557727 NALCNQ8IZF0 1738 aa13.04□□□□□ -0.32
CHD8-214ENST00000557727 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
CHD8-214ENST00000557727 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
CHD8-214ENST00000557727 BCANQ96GW7 911 aa13.03□□□□□ -0.32
CHD8-214ENST00000557727 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
CHD8-214ENST00000557727 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
CHD8-214ENST00000557727 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
CHD8-214ENST00000557727 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
CHD8-214ENST00000557727 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
CHD8-214ENST00000557727 TMEM132EQ6IEE7 984 aa13.02□□□□□ -0.33
CHD8-214ENST00000557727 AMOTL2Q9Y2J4 779 aa13.02□□□□□ -0.33
CHD8-214ENST00000557727 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
CHD8-214ENST00000557727 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
CHD8-214ENST00000557727 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.33
CHD8-214ENST00000557727 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
CHD8-214ENST00000557727 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
CHD8-214ENST00000557727 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
CHD8-214ENST00000557727 GPRASP1Q5JY77 1395 aa13□□□□□ -0.33
CHD8-214ENST00000557727 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
CHD8-214ENST00000557727 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
CHD8-214ENST00000557727 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
CHD8-214ENST00000557727 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
CHD8-214ENST00000557727 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
CHD8-214ENST00000557727 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
CHD8-214ENST00000557727 FAM135BQ49AJ0 1406 aa12.97□□□□□ -0.33
CHD8-214ENST00000557727 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
CHD8-214ENST00000557727 PLEKHH1Q9ULM0 1364 aa12.97□□□□□ -0.33
CHD8-214ENST00000557727 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
CHD8-214ENST00000557727 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
CHD8-214ENST00000557727 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
CHD8-214ENST00000557727 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.34
CHD8-214ENST00000557727 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
CHD8-214ENST00000557727 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
CHD8-214ENST00000557727 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
CHD8-214ENST00000557727 QRICH2Q9H0J4 1663 aa12.95□□□□□ -0.34
CHD8-214ENST00000557727 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
CHD8-214ENST00000557727 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
CHD8-214ENST00000557727 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
CHD8-214ENST00000557727 STK26Q9P289 416 aa12.93□□□□□ -0.34
CHD8-214ENST00000557727 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
CHD8-214ENST00000557727 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
CHD8-214ENST00000557727 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms