RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 ABCC11Q96J66 1382 aa14.21□□□□□ -0.14
GABRB3-212ENST00000557641 KDM4FA0A1W2PPD8 638 aa14.2□□□□□ -0.14
GABRB3-212ENST00000557641 MED14O60244 1454 aa14.19□□□□□ -0.14
GABRB3-212ENST00000557641 ADAMTS13Q76LX8 1427 aa14.19□□□□□ -0.14
GABRB3-212ENST00000557641 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
GABRB3-212ENST00000557641 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
GABRB3-212ENST00000557641 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
GABRB3-212ENST00000557641 DIP2AQ14689 1571 aa14.18□□□□□ -0.14
GABRB3-212ENST00000557641 NRXN3Q9Y4C0 1643 aa14.18□□□□□ -0.14
GABRB3-212ENST00000557641 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
GABRB3-212ENST00000557641 PIK3R4Q99570 1358 aa14.17□□□□□ -0.14
GABRB3-212ENST00000557641 TECPR2O15040 1411 aa14.16□□□□□ -0.14
GABRB3-212ENST00000557641 STK26Q9P289 416 aa14.16□□□□□ -0.14
GABRB3-212ENST00000557641 METP08581 1390 aa14.16□□□□□ -0.14
GABRB3-212ENST00000557641 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
GABRB3-212ENST00000557641 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
GABRB3-212ENST00000557641 POGKQ9P215 609 aa14.15□□□□□ -0.14
GABRB3-212ENST00000557641 SETD1AO15047 1707 aaKnown RBP14.15□□□□□ -0.14
GABRB3-212ENST00000557641 EVC2Q86UK5 1308 aa14.14□□□□□ -0.15
GABRB3-212ENST00000557641 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
GABRB3-212ENST00000557641 SLC26A8Q96RN1 970 aa14.13□□□□□ -0.15
GABRB3-212ENST00000557641 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
GABRB3-212ENST00000557641 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
GABRB3-212ENST00000557641 NPHP4O75161 1426 aaPredicted RBP14.12□□□□□ -0.15
GABRB3-212ENST00000557641 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
GABRB3-212ENST00000557641 ANP32CO43423 234 aa14.11□□□□□ -0.15
GABRB3-212ENST00000557641 CPS1P31327 1500 aa14.1□□□□□ -0.15
GABRB3-212ENST00000557641 KNDC1Q76NI1 1749 aa14.1□□□□□ -0.15
GABRB3-212ENST00000557641 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
GABRB3-212ENST00000557641 QRICH2Q9H0J4 1663 aa14.09□□□□□ -0.15
GABRB3-212ENST00000557641 PTCH1Q13635 1447 aa14.08□□□□□ -0.15
GABRB3-212ENST00000557641 MIER1Q8N108 512 aa14.08□□□□□ -0.16
GABRB3-212ENST00000557641 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
GABRB3-212ENST00000557641 PTPRUQ92729 1446 aa14.07□□□□□ -0.16
GABRB3-212ENST00000557641 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
GABRB3-212ENST00000557641 NCKAP5LQ9HCH0 1330 aa14.06□□□□□ -0.16
GABRB3-212ENST00000557641 ATAD2Q6PL18 1390 aa14.06□□□□□ -0.16
GABRB3-212ENST00000557641 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
GABRB3-212ENST00000557641 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
GABRB3-212ENST00000557641 SAFB2Q14151 953 aaKnown RBP eCLIP14.05□□□□□ -0.16
GABRB3-212ENST00000557641 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
GABRB3-212ENST00000557641 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
GABRB3-212ENST00000557641 MINK1Q8N4C8 1332 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-212ENST00000557641 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
GABRB3-212ENST00000557641 LMTK3Q96Q04 1460 aa14.05□□□□□ -0.16
GABRB3-212ENST00000557641 KCNA6P17658 529 aa14.04□□□□□ -0.16
GABRB3-212ENST00000557641 KTN1Q86UP2 1357 aaKnown RBP14.04□□□□□ -0.16
GABRB3-212ENST00000557641 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
GABRB3-212ENST00000557641 TULP4Q9NRJ4 1543 aa14.04□□□□□ -0.16
GABRB3-212ENST00000557641 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
GABRB3-212ENST00000557641 WASLO00401 505 aaPredicted RBP14.03□□□□□ -0.16
GABRB3-212ENST00000557641 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
GABRB3-212ENST00000557641 CDK19Q9BWU1 502 aa14.03□□□□□ -0.16
GABRB3-212ENST00000557641 PANK3Q9H999 370 aa14.03□□□□□ -0.16
GABRB3-212ENST00000557641 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-212ENST00000557641 FKBP8Q14318 412 aa14.02□□□□□ -0.17
GABRB3-212ENST00000557641 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
GABRB3-212ENST00000557641 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-212ENST00000557641 PRKRIP1Q9H875 184 aaPredicted RBP14□□□□□ -0.17
GABRB3-212ENST00000557641 CABP2Q9NPB3 220 aa14□□□□□ -0.17
GABRB3-212ENST00000557641 KNSTRNQ9Y448 316 aa14□□□□□ -0.17
GABRB3-212ENST00000557641 ADGRB2O60241 1585 aa14□□□□□ -0.17
GABRB3-212ENST00000557641 NPC1L1Q9UHC9 1359 aa13.99□□□□□ -0.17
GABRB3-212ENST00000557641 HSPA2P54652 639 aa13.99□□□□□ -0.17
GABRB3-212ENST00000557641 RALBP1Q15311 655 aa13.99□□□□□ -0.17
GABRB3-212ENST00000557641 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
GABRB3-212ENST00000557641 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
GABRB3-212ENST00000557641 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
GABRB3-212ENST00000557641 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
GABRB3-212ENST00000557641 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
GABRB3-212ENST00000557641 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
GABRB3-212ENST00000557641 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
GABRB3-212ENST00000557641 MYOM1P52179 1685 aa13.96□□□□□ -0.17
GABRB3-212ENST00000557641 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.17
GABRB3-212ENST00000557641 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.17
GABRB3-212ENST00000557641 NCOA3Q9Y6Q9 1424 aa13.96□□□□□ -0.18
GABRB3-212ENST00000557641 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-212ENST00000557641 NUDT16Q96DE0 195 aaKnown RBP13.95□□□□□ -0.18
GABRB3-212ENST00000557641 ATP7BP35670 1465 aa13.93□□□□□ -0.18
GABRB3-212ENST00000557641 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-212ENST00000557641 ANKARQ7Z5J8 1434 aa13.93□□□□□ -0.18
GABRB3-212ENST00000557641 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-212ENST00000557641 AKT1S1Q96B36 256 aa13.93□□□□□ -0.18
GABRB3-212ENST00000557641 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
GABRB3-212ENST00000557641 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
GABRB3-212ENST00000557641 PARD3Q8TEW0 1356 aa13.93□□□□□ -0.18
GABRB3-212ENST00000557641 ADGRL3Q9HAR2 1447 aa13.92□□□□□ -0.18
GABRB3-212ENST00000557641 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
GABRB3-212ENST00000557641 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
GABRB3-212ENST00000557641 MYBBP1AQ9BQG0 1328 aaKnown RBP13.91□□□□□ -0.18
GABRB3-212ENST00000557641 PLEKHG3A1L390 1219 aa13.91□□□□□ -0.18
GABRB3-212ENST00000557641 NSD2O96028 1365 aa13.91□□□□□ -0.18
GABRB3-212ENST00000557641 PPIP5K1Q6PFW1 1433 aa13.9□□□□□ -0.18
GABRB3-212ENST00000557641 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.18
GABRB3-212ENST00000557641 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
GABRB3-212ENST00000557641 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
GABRB3-212ENST00000557641 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
GABRB3-212ENST00000557641 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
GABRB3-212ENST00000557641 PRR36Q9H6K5 1346 aa13.89□□□□□ -0.19
GABRB3-212ENST00000557641 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms