RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MMP16P51512 607 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 THSD4Q6ZMP0 1018 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 COG6Q9Y2V7 657 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 PRM3Q9NNZ6 103 aa3.48□□□□□ -1.85
HIF1A-212ENST00000557538 GPR37L1O60883 481 aa3.48□□□□□ -1.85
HIF1A-212ENST00000557538 QPCTQ16769 361 aa3.48□□□□□ -1.85
HIF1A-212ENST00000557538 PROSER2Q86WR7 435 aaPredicted RBP3.48□□□□□ -1.85
HIF1A-212ENST00000557538 MCCD1P59942 119 aaPredicted RBP3.47□□□□□ -1.85
HIF1A-212ENST00000557538 PPP4CP60510 307 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 FUT2Q10981 343 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 GPKOWQ92917 476 aaPredicted RBP eCLIP3.47□□□□□ -1.85
HIF1A-212ENST00000557538 CFAP99D6REC4 459 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 F12P00748 615 aaPredicted RBP3.47□□□□□ -1.85
HIF1A-212ENST00000557538 WNT2BQ93097 391 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 TRIM34Q9BYJ4 488 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 GPSM3Q9Y4H4 160 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 NDUFB9Q9Y6M9 179 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 DXOO77932 396 aaKnown RBP3.47□□□□□ -1.85
HIF1A-212ENST00000557538 FMNL1O95466 1100 aaPredicted RBP3.47□□□□□ -1.85
HIF1A-212ENST00000557538 USP17L8P0C7I0 530 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 APLP1P51693 650 aa3.47□□□□□ -1.85
HIF1A-212ENST00000557538 JUNDP17535 347 aa3.46□□□□□ -1.85
HIF1A-212ENST00000557538 SOX11P35716 441 aa3.46□□□□□ -1.85
HIF1A-212ENST00000557538 PTPRNQ16849 979 aa3.46□□□□□ -1.85
HIF1A-212ENST00000557538 WASHC4Q2M389 1173 aa3.46□□□□□ -1.85
HIF1A-212ENST00000557538 SNRKQ9NRH2 765 aa3.46□□□□□ -1.85
HIF1A-212ENST00000557538 UBTFP17480 764 aaKnown RBP3.46□□□□□ -1.86
HIF1A-212ENST00000557538 CABLES1Q8TDN4 633 aa3.46□□□□□ -1.86
HIF1A-212ENST00000557538 USB1Q9BQ65 265 aaKnown RBP3.46□□□□□ -1.86
HIF1A-212ENST00000557538 HPS5Q9UPZ3 1129 aa3.46□□□□□ -1.86
HIF1A-212ENST00000557538 SLC27A5Q9Y2P5 690 aa3.46□□□□□ -1.86
HIF1A-212ENST00000557538 ITGBL1O95965 494 aaPredicted RBP3.46□□□□□ -1.86
HIF1A-212ENST00000557538 HELBQ8NG08 1087 aaPredicted RBP3.45□□□□□ -1.86
HIF1A-212ENST00000557538 STAC3Q96MF2 364 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 IRF5Q13568 498 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 WWC1Q8IX03 1113 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 PNMA1Q8ND90 353 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 PRR7Q8TB68 274 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 POTEMA6NI47 508 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 TJAP1Q5JTD0 557 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 CCDC125Q86Z20 511 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 CDAN1Q8IWY9 1227 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 SCUBE3Q8IX30 993 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 PLSCR2Q9NRY7 297 aa3.45□□□□□ -1.86
HIF1A-212ENST00000557538 GOLGA8CPA6NN73 597 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 RAD21O60216 631 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 RGS20O76081 388 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 SERPINA10Q9UK55 444 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 CTDSPL2Q05D32 466 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 POTEGQ6S5H5 508 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 ANKRD13DQ6ZTN6 518 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 FAM160A2Q8N612 972 aaPredicted RBP3.44□□□□□ -1.86
HIF1A-212ENST00000557538 ARMC2Q8NEN0 867 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 ZNF592Q92610 1267 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 IL21Q9HBE4 155 aa3.44□□□□□ -1.86
HIF1A-212ENST00000557538 NUTM2BA6NNL0 878 aaPredicted RBP3.43□□□□□ -1.86
HIF1A-212ENST00000557538 NUTM2EB1AL46 878 aaPredicted RBP3.43□□□□□ -1.86
HIF1A-212ENST00000557538 ADH1BP00325 375 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 BCAMP50895 628 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 NUTM2DQ5VT03 806 aaPredicted RBP3.43□□□□□ -1.86
HIF1A-212ENST00000557538 NUTM2AQ8IVF1 878 aaPredicted RBP3.43□□□□□ -1.86
HIF1A-212ENST00000557538 NFATC2IPQ8NCF5 419 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 C1orf115Q9H7X2 142 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 PCDHB3Q9Y5E6 796 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 AP1G2O75843 785 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 ALG2Q9H553 416 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 EVA1BQ9NVM1 165 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 GUCA2AQ02747 115 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 POM121Q96HA1 1249 aa3.43□□□□□ -1.86
HIF1A-212ENST00000557538 ZPR1O75312 459 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 HLA-CQ95604 372 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 CLUAP1Q96AJ1 413 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 WBP1LQ9NX94 342 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 CHIC2Q9UKJ5 165 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 BLOC1S3Q6QNY0 202 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 MPNDQ8N594 471 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 C6orf229H3BNL8 230 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 LZTS3O60299 673 aaPredicted RBP3.42□□□□□ -1.86
HIF1A-212ENST00000557538 KCNH2Q12809 1159 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 PDXDC2PQ6P474 469 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 HCSTQ9UBK5 93 aa3.42□□□□□ -1.86
HIF1A-212ENST00000557538 PPP1R15AO75807 674 aaPredicted RBP3.41□□□□□ -1.86
HIF1A-212ENST00000557538 RNF19BQ6ZMZ0 732 aa3.41□□□□□ -1.86
HIF1A-212ENST00000557538 SRPK2P78362 688 aaKnown RBP3.41□□□□□ -1.86
HIF1A-212ENST00000557538 HMX1Q9NP08 348 aaPredicted RBP3.41□□□□□ -1.86
HIF1A-212ENST00000557538 NR1H3Q13133 447 aa3.4□□□□□ -1.86
HIF1A-212ENST00000557538 SPSB2Q99619 263 aa3.4□□□□□ -1.86
HIF1A-212ENST00000557538 FKBPLQ9UIM3 349 aa3.4□□□□□ -1.86
HIF1A-212ENST00000557538 CCNYL3P0C7X3 344 aa3.4□□□□□ -1.86
HIF1A-212ENST00000557538 HOMEZQ8IX15 550 aa3.4□□□□□ -1.86
HIF1A-212ENST00000557538 RPIAP49247 311 aa3.4□□□□□ -1.87
HIF1A-212ENST00000557538 SH3BP5LQ7L8J4 393 aa3.4□□□□□ -1.87
HIF1A-212ENST00000557538 MTRQ99707 1265 aa3.4□□□□□ -1.87
HIF1A-212ENST00000557538 TBC1D2BQ9UPU7 963 aa3.4□□□□□ -1.87
HIF1A-212ENST00000557538 SPNS2Q8IVW8 549 aa3.39□□□□□ -1.87
HIF1A-212ENST00000557538 PLEKHM2Q8IWE5 1019 aa3.39□□□□□ -1.87
HIF1A-212ENST00000557538 LRRN4Q8WUT4 740 aa3.39□□□□□ -1.87
HIF1A-212ENST00000557538 ZNF330Q9Y3S2 320 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-212ENST00000557538 PER1O15534 1290 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-212ENST00000557538 PDE4CQ08493 712 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms