RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 SPATA31E1Q6ZUB1 1445 aa15.72■□□□□ 0.11
PSMC6-215ENST00000557517 HRCP23327 699 aa15.72■□□□□ 0.11
PSMC6-215ENST00000557517 RGL3Q3MIN7 710 aa15.72■□□□□ 0.11
PSMC6-215ENST00000557517 ADGRF5Q8IZF2 1346 aa15.7■□□□□ 0.1
PSMC6-215ENST00000557517 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
PSMC6-215ENST00000557517 ANKRD30BQ9BXX2 1392 aa15.69■□□□□ 0.1
PSMC6-215ENST00000557517 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
PSMC6-215ENST00000557517 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
PSMC6-215ENST00000557517 ROBO2Q9HCK4 1378 aa15.68■□□□□ 0.1
PSMC6-215ENST00000557517 RXRBP28702 533 aa15.68■□□□□ 0.1
PSMC6-215ENST00000557517 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
PSMC6-215ENST00000557517 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
PSMC6-215ENST00000557517 MST1RQ04912 1400 aa15.67■□□□□ 0.1
PSMC6-215ENST00000557517 ADGRL3Q9HAR2 1447 aa15.67■□□□□ 0.1
PSMC6-215ENST00000557517 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
PSMC6-215ENST00000557517 LRRC59Q96AG4 307 aaKnown RBP15.64■□□□□ 0.09
PSMC6-215ENST00000557517 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
PSMC6-215ENST00000557517 NHSL1Q5SYE7 1610 aa15.64■□□□□ 0.09
PSMC6-215ENST00000557517 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
PSMC6-215ENST00000557517 SRCAPQ6ZRS2 3230 aa15.63■□□□□ 0.09
PSMC6-215ENST00000557517 SIRT1Q96EB6 747 aa15.63■□□□□ 0.09
PSMC6-215ENST00000557517 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
PSMC6-215ENST00000557517 KIF1BO60333 1816 aa15.63■□□□□ 0.09
PSMC6-215ENST00000557517 RGS12O14924 1447 aa15.62■□□□□ 0.09
PSMC6-215ENST00000557517 TMEM132EQ6IEE7 984 aa15.62■□□□□ 0.09
PSMC6-215ENST00000557517 ASXL1Q8IXJ9 1541 aa15.62■□□□□ 0.09
PSMC6-215ENST00000557517 AFF2P51816 1311 aa15.62■□□□□ 0.09
PSMC6-215ENST00000557517 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
PSMC6-215ENST00000557517 LRPPRCP42704 1394 aaKnown RBP15.61■□□□□ 0.09
PSMC6-215ENST00000557517 C1orf167Q5SNV9 1468 aa15.6■□□□□ 0.09
PSMC6-215ENST00000557517 CHRDL2Q6WN34 429 aa15.6■□□□□ 0.09
PSMC6-215ENST00000557517 WAPLQ7Z5K2 1190 aa15.6■□□□□ 0.09
PSMC6-215ENST00000557517 TECPR2O15040 1411 aa15.6■□□□□ 0.09
PSMC6-215ENST00000557517 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
PSMC6-215ENST00000557517 DDX17Q92841 729 aaKnown RBP15.59■□□□□ 0.09
PSMC6-215ENST00000557517 STK26Q9P289 416 aa15.59■□□□□ 0.09
PSMC6-215ENST00000557517 NUTM2BA6NNL0 878 aaPredicted RBP15.58■□□□□ 0.08
PSMC6-215ENST00000557517 NUTM2EB1AL46 878 aaPredicted RBP15.58■□□□□ 0.08
PSMC6-215ENST00000557517 CFAP70Q5T0N1 1121 aa15.58■□□□□ 0.08
PSMC6-215ENST00000557517 NUTM2AQ8IVF1 878 aaPredicted RBP15.58■□□□□ 0.08
PSMC6-215ENST00000557517 STAC3Q96MF2 364 aa15.58■□□□□ 0.08
PSMC6-215ENST00000557517 SOS2Q07890 1332 aaPredicted RBP15.58■□□□□ 0.08
PSMC6-215ENST00000557517 RBM6P78332 1123 aaKnown RBP15.57■□□□□ 0.08
PSMC6-215ENST00000557517 NRXN1Q9ULB1 1477 aa15.56■□□□□ 0.08
PSMC6-215ENST00000557517 PPLO60437 1756 aa15.56■□□□□ 0.08
PSMC6-215ENST00000557517 PNPLA6Q8IY17 1366 aa15.55■□□□□ 0.08
PSMC6-215ENST00000557517 YTHDC2Q9H6S0 1430 aaKnown RBP15.54■□□□□ 0.08
PSMC6-215ENST00000557517 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
PSMC6-215ENST00000557517 DHX57Q6P158 1386 aaKnown RBP15.53■□□□□ 0.08
PSMC6-215ENST00000557517 PLEKHH1Q9ULM0 1364 aa15.53■□□□□ 0.08
PSMC6-215ENST00000557517 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
PSMC6-215ENST00000557517 LAMC1P11047 1609 aa15.53■□□□□ 0.08
PSMC6-215ENST00000557517 DCAF11Q8TEB1 546 aa15.52■□□□□ 0.08
PSMC6-215ENST00000557517 MYOM2P54296 1465 aa15.52■□□□□ 0.07
PSMC6-215ENST00000557517 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
PSMC6-215ENST00000557517 C8orf37Q96NL8 207 aa15.51■□□□□ 0.07
PSMC6-215ENST00000557517 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
PSMC6-215ENST00000557517 FOXO3O43524 673 aa15.5■□□□□ 0.07
PSMC6-215ENST00000557517 NALCNQ8IZF0 1738 aa15.5■□□□□ 0.07
PSMC6-215ENST00000557517 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
PSMC6-215ENST00000557517 ZBTB22O15209 634 aa15.48■□□□□ 0.07
PSMC6-215ENST00000557517 NGLY1Q96IV0 654 aa15.48■□□□□ 0.07
PSMC6-215ENST00000557517 PRAM1Q96QH2 718 aa15.48■□□□□ 0.07
PSMC6-215ENST00000557517 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
PSMC6-215ENST00000557517 NUTM2FA1L443 756 aa15.47■□□□□ 0.07
PSMC6-215ENST00000557517 IFT172Q9UG01 1749 aa15.46■□□□□ 0.07
PSMC6-215ENST00000557517 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.07
PSMC6-215ENST00000557517 EP400Q96L91 3159 aa15.44■□□□□ 0.06
PSMC6-215ENST00000557517 ADAMTS2O95450 1211 aa15.44■□□□□ 0.06
PSMC6-215ENST00000557517 FNBP4Q8N3X1 1017 aaPredicted RBP15.44■□□□□ 0.06
PSMC6-215ENST00000557517 POGKQ9P215 609 aa15.44■□□□□ 0.06
PSMC6-215ENST00000557517 TRAK1Q9UPV9 953 aa15.44■□□□□ 0.06
PSMC6-215ENST00000557517 ATRNO75882 1429 aa15.43■□□□□ 0.06
PSMC6-215ENST00000557517 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
PSMC6-215ENST00000557517 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
PSMC6-215ENST00000557517 PXDNQ92626 1479 aa15.42■□□□□ 0.06
PSMC6-215ENST00000557517 XPCQ01831 940 aaPredicted RBP15.42■□□□□ 0.06
PSMC6-215ENST00000557517 SAFB2Q14151 953 aaKnown RBP eCLIP15.42■□□□□ 0.06
PSMC6-215ENST00000557517 KRT28Q7Z3Y7 464 aa15.42■□□□□ 0.06
PSMC6-215ENST00000557517 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
PSMC6-215ENST00000557517 PHF8Q9UPP1 1060 aa15.42■□□□□ 0.06
PSMC6-215ENST00000557517 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
PSMC6-215ENST00000557517 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
PSMC6-215ENST00000557517 USP21Q9UK80 565 aa15.41■□□□□ 0.06
PSMC6-215ENST00000557517 DLC1Q96QB1 1528 aa15.41■□□□□ 0.06
PSMC6-215ENST00000557517 PSME1Q06323 249 aa15.39■□□□□ 0.05
PSMC6-215ENST00000557517 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
PSMC6-215ENST00000557517 KNDC1Q76NI1 1749 aa15.38■□□□□ 0.05
PSMC6-215ENST00000557517 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
PSMC6-215ENST00000557517 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
PSMC6-215ENST00000557517 MARF1Q9Y4F3 1742 aaKnown RBP15.37■□□□□ 0.05
PSMC6-215ENST00000557517 BCL9LQ86UU0 1499 aa15.36■□□□□ 0.05
PSMC6-215ENST00000557517 HIRIP3Q9BW71 556 aaPredicted RBP15.36■□□□□ 0.05
PSMC6-215ENST00000557517 ANKARQ7Z5J8 1434 aa15.35■□□□□ 0.05
PSMC6-215ENST00000557517 PMFBP1Q8TBY8 1022 aa15.35■□□□□ 0.05
PSMC6-215ENST00000557517 MINK1Q8N4C8 1332 aaPredicted RBP15.35■□□□□ 0.05
PSMC6-215ENST00000557517 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
PSMC6-215ENST00000557517 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.34■□□□□ 0.05
PSMC6-215ENST00000557517 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
PSMC6-215ENST00000557517 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms