RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PLEKHG1Q9ULL1 1385 aa9.16□□□□□ -0.94
VPS33B-207ENST00000557470 RIMS2Q9UQ26 1411 aa9.15□□□□□ -0.94
VPS33B-207ENST00000557470 MAP3K13O43283 966 aa9.15□□□□□ -0.94
VPS33B-207ENST00000557470 ADGRL2O95490 1459 aa9.15□□□□□ -0.95
VPS33B-207ENST00000557470 RPRD2Q5VT52 1461 aaKnown RBP9.15□□□□□ -0.95
VPS33B-207ENST00000557470 CHD2O14647 1828 aaKnown RBP9.15□□□□□ -0.95
VPS33B-207ENST00000557470 PPP1R15AO75807 674 aaPredicted RBP9.14□□□□□ -0.95
VPS33B-207ENST00000557470 MYO5BQ9ULV0 1848 aa9.14□□□□□ -0.95
VPS33B-207ENST00000557470 GCC2Q8IWJ2 1684 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 SPATA31A6Q5VVP1 1343 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 LHX8Q68G74 356 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 PELP1Q8IZL8 1130 aaKnown RBP9.13□□□□□ -0.95
VPS33B-207ENST00000557470 TRPC6Q9Y210 931 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 ANKRD50Q9ULJ7 1429 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
VPS33B-207ENST00000557470 AHDC1Q5TGY3 1603 aaPredicted RBP9.13□□□□□ -0.95
VPS33B-207ENST00000557470 MEX3CQ5U5Q3 659 aaKnown RBP9.12□□□□□ -0.95
VPS33B-207ENST00000557470 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
VPS33B-207ENST00000557470 KLHL34Q8N239 644 aa9.12□□□□□ -0.95
VPS33B-207ENST00000557470 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS33B-207ENST00000557470 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
VPS33B-207ENST00000557470 TBX22Q9Y458 520 aa9.12□□□□□ -0.95
VPS33B-207ENST00000557470 ADAMTS13Q76LX8 1427 aa9.12□□□□□ -0.95
VPS33B-207ENST00000557470 HDGFP51858 240 aaKnown RBP9.11□□□□□ -0.95
VPS33B-207ENST00000557470 NUTM2DQ5VT03 806 aaPredicted RBP9.11□□□□□ -0.95
VPS33B-207ENST00000557470 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
VPS33B-207ENST00000557470 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
VPS33B-207ENST00000557470 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.11□□□□□ -0.95
VPS33B-207ENST00000557470 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
VPS33B-207ENST00000557470 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
VPS33B-207ENST00000557470 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
VPS33B-207ENST00000557470 C19orf44Q9H6X5 657 aa9.1□□□□□ -0.95
VPS33B-207ENST00000557470 DIP2AQ14689 1571 aa9.1□□□□□ -0.95
VPS33B-207ENST00000557470 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-207ENST00000557470 CHGAP10645 457 aaKnown RBP9.09□□□□□ -0.95
VPS33B-207ENST00000557470 ATF3P18847 181 aa9.09□□□□□ -0.95
VPS33B-207ENST00000557470 FAM50AQ14320 339 aaKnown RBP9.09□□□□□ -0.95
VPS33B-207ENST00000557470 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-207ENST00000557470 BRINP3Q76B58 766 aa9.09□□□□□ -0.95
VPS33B-207ENST00000557470 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-207ENST00000557470 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS33B-207ENST00000557470 UNC13BO14795 1591 aa9.08□□□□□ -0.96
VPS33B-207ENST00000557470 PTPRUQ92729 1446 aa9.08□□□□□ -0.96
VPS33B-207ENST00000557470 RXRBP28702 533 aa9.08□□□□□ -0.96
VPS33B-207ENST00000557470 DCAF8Q5TAQ9 597 aa9.08□□□□□ -0.96
VPS33B-207ENST00000557470 PIK3R4Q99570 1358 aa9.08□□□□□ -0.96
VPS33B-207ENST00000557470 E9PCH4 1651 aa9.07□□□□□ -0.96
VPS33B-207ENST00000557470 TRPM2O94759 1503 aa9.07□□□□□ -0.96
VPS33B-207ENST00000557470 NUTM2BA6NNL0 878 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-207ENST00000557470 NUTM2EB1AL46 878 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-207ENST00000557470 NUTM2AQ8IVF1 878 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-207ENST00000557470 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
VPS33B-207ENST00000557470 CDK12Q9NYV4 1490 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-207ENST00000557470 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
VPS33B-207ENST00000557470 DCCP43146 1447 aa9.06□□□□□ -0.96
VPS33B-207ENST00000557470 ASXL1Q8IXJ9 1541 aa9.06□□□□□ -0.96
VPS33B-207ENST00000557470 ARXQ96QS3 562 aa9.06□□□□□ -0.96
VPS33B-207ENST00000557470 AFF2P51816 1311 aa9.05□□□□□ -0.96
VPS33B-207ENST00000557470 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-207ENST00000557470 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
VPS33B-207ENST00000557470 BMP2KQ9NSY1 1161 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-207ENST00000557470 PCDHB13Q9Y5F0 798 aa9.05□□□□□ -0.96
VPS33B-207ENST00000557470 XRN1Q8IZH2 1706 aaKnown RBP9.05□□□□□ -0.96
VPS33B-207ENST00000557470 MST1RQ04912 1400 aa9.05□□□□□ -0.96
VPS33B-207ENST00000557470 SETD5Q9C0A6 1442 aa9.05□□□□□ -0.96
VPS33B-207ENST00000557470 PYGBP11216 843 aa9.04□□□□□ -0.96
VPS33B-207ENST00000557470 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
VPS33B-207ENST00000557470 IQGAP3Q86VI3 1631 aa9.04□□□□□ -0.96
VPS33B-207ENST00000557470 NRXN3Q9Y4C0 1643 aa9.04□□□□□ -0.96
VPS33B-207ENST00000557470 RGS12O14924 1447 aa9.04□□□□□ -0.96
VPS33B-207ENST00000557470 NHSL1Q5SYE7 1610 aa9.03□□□□□ -0.96
VPS33B-207ENST00000557470 POTEB2H3BUK9 544 aa9.03□□□□□ -0.96
VPS33B-207ENST00000557470 SETBP1Q9Y6X0 1596 aa9.03□□□□□ -0.96
VPS33B-207ENST00000557470 METP08581 1390 aa9.02□□□□□ -0.97
VPS33B-207ENST00000557470 DDX17Q92841 729 aaKnown RBP9.02□□□□□ -0.97
VPS33B-207ENST00000557470 C8orf37Q96NL8 207 aa9.02□□□□□ -0.97
VPS33B-207ENST00000557470 NUP155O75694 1391 aa9.01□□□□□ -0.97
VPS33B-207ENST00000557470 ROCK1Q13464 1354 aa9.01□□□□□ -0.97
VPS33B-207ENST00000557470 PNPLA6Q8IY17 1366 aa9.01□□□□□ -0.97
VPS33B-207ENST00000557470 LRRC59Q96AG4 307 aaKnown RBP9.01□□□□□ -0.97
VPS33B-207ENST00000557470 SGIP1Q9BQI5 828 aa9.01□□□□□ -0.97
VPS33B-207ENST00000557470 QTRT2Q9H974 415 aaKnown RBP9.01□□□□□ -0.97
VPS33B-207ENST00000557470 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
VPS33B-207ENST00000557470 TIE1P35590 1138 aa9□□□□□ -0.97
VPS33B-207ENST00000557470 RBM6P78332 1123 aaKnown RBP9□□□□□ -0.97
VPS33B-207ENST00000557470 METRNQ9UJH8 293 aa9□□□□□ -0.97
VPS33B-207ENST00000557470 TTLL13PA6NNM8 815 aa8.99□□□□□ -0.97
VPS33B-207ENST00000557470 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
VPS33B-207ENST00000557470 NALCNQ8IZF0 1738 aa8.99□□□□□ -0.97
VPS33B-207ENST00000557470 C1orf167Q5SNV9 1468 aa8.98□□□□□ -0.97
VPS33B-207ENST00000557470 ADAMTS2O95450 1211 aa8.98□□□□□ -0.97
VPS33B-207ENST00000557470 ZNF326Q5BKZ1 582 aaKnown RBP8.98□□□□□ -0.97
VPS33B-207ENST00000557470 SLC39A7Q92504 469 aa8.98□□□□□ -0.97
VPS33B-207ENST00000557470 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
VPS33B-207ENST00000557470 SPHKAPQ2M3C7 1700 aa8.97□□□□□ -0.97
VPS33B-207ENST00000557470 GSE1Q14687 1217 aa8.97□□□□□ -0.97
VPS33B-207ENST00000557470 NGLY1Q96IV0 654 aa8.97□□□□□ -0.97
VPS33B-207ENST00000557470 PCDHB8Q9UN66 801 aa8.97□□□□□ -0.97
VPS33B-207ENST00000557470 NEXMIFQ5QGS0 1516 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms