RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
VIPAS39-210ENST00000557466 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
VIPAS39-210ENST00000557466 QRICH2Q9H0J4 1663 aa21.22■□□□□ 0.99
VIPAS39-210ENST00000557466 PRAM1Q96QH2 718 aa21.22■□□□□ 0.99
VIPAS39-210ENST00000557466 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
VIPAS39-210ENST00000557466 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
VIPAS39-210ENST00000557466 TOM1O60784 492 aa21.19■□□□□ 0.98
VIPAS39-210ENST00000557466 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
VIPAS39-210ENST00000557466 POGKQ9P215 609 aa21.18■□□□□ 0.98
VIPAS39-210ENST00000557466 ROBO1Q9Y6N7 1651 aa21.18■□□□□ 0.98
VIPAS39-210ENST00000557466 MST1RQ04912 1400 aa21.17■□□□□ 0.98
VIPAS39-210ENST00000557466 ATF3P18847 181 aa21.16■□□□□ 0.98
VIPAS39-210ENST00000557466 CADPS2Q86UW7 1296 aa21.16■□□□□ 0.98
VIPAS39-210ENST00000557466 PIP4K2BP78356 416 aa21.14■□□□□ 0.97
VIPAS39-210ENST00000557466 CARD11Q9BXL7 1154 aa21.14■□□□□ 0.97
VIPAS39-210ENST00000557466 RGPD8O14715 1765 aaPredicted RBP21.13■□□□□ 0.97
VIPAS39-210ENST00000557466 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
VIPAS39-210ENST00000557466 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
VIPAS39-210ENST00000557466 USP32Q8NFA0 1604 aa21.12■□□□□ 0.97
VIPAS39-210ENST00000557466 MINK1Q8N4C8 1332 aaPredicted RBP21.12■□□□□ 0.97
VIPAS39-210ENST00000557466 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
VIPAS39-210ENST00000557466 SLAIN2Q9P270 581 aa21.11■□□□□ 0.97
VIPAS39-210ENST00000557466 C1orf167Q5SNV9 1468 aa21.1■□□□□ 0.97
VIPAS39-210ENST00000557466 HIRIP3Q9BW71 556 aaPredicted RBP21.1■□□□□ 0.97
VIPAS39-210ENST00000557466 TULP4Q9NRJ4 1543 aa21.08■□□□□ 0.96
VIPAS39-210ENST00000557466 NHSL1Q5SYE7 1610 aa21.07■□□□□ 0.96
VIPAS39-210ENST00000557466 ITSN1Q15811 1721 aa21.06■□□□□ 0.96
VIPAS39-210ENST00000557466 USP47Q96K76 1375 aa21.05■□□□□ 0.96
VIPAS39-210ENST00000557466 KIF1AQ12756 1690 aa21.05■□□□□ 0.96
VIPAS39-210ENST00000557466 TOPAZ1Q8N9V7 1692 aa21.05■□□□□ 0.96
VIPAS39-210ENST00000557466 AHDC1Q5TGY3 1603 aaPredicted RBP21.04■□□□□ 0.96
VIPAS39-210ENST00000557466 PHLPP1O60346 1717 aa21.04■□□□□ 0.96
VIPAS39-210ENST00000557466 NUTM2FA1L443 756 aa21.04■□□□□ 0.96
VIPAS39-210ENST00000557466 ANKARQ7Z5J8 1434 aa21.04■□□□□ 0.96
VIPAS39-210ENST00000557466 ATP7BP35670 1465 aa21.03■□□□□ 0.96
VIPAS39-210ENST00000557466 WASLO00401 505 aaPredicted RBP21.03■□□□□ 0.96
VIPAS39-210ENST00000557466 BRINP3Q76B58 766 aa21.03■□□□□ 0.96
VIPAS39-210ENST00000557466 SBNO2Q9Y2G9 1366 aa21.02■□□□□ 0.96
VIPAS39-210ENST00000557466 COL16A1Q07092 1604 aaPredicted RBP21.01■□□□□ 0.95
VIPAS39-210ENST00000557466 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
VIPAS39-210ENST00000557466 ORAI2Q96SN7 254 aa21■□□□□ 0.95
VIPAS39-210ENST00000557466 HSPA1LP34931 641 aa20.98■□□□□ 0.95
VIPAS39-210ENST00000557466 CDK19Q9BWU1 502 aa20.98■□□□□ 0.95
VIPAS39-210ENST00000557466 ST20-MTHFSA0A0A6YYL1 179 aa20.97■□□□□ 0.95
VIPAS39-210ENST00000557466 ESCO1Q5FWF5 840 aa20.97■□□□□ 0.95
VIPAS39-210ENST00000557466 TESK2Q96S53 571 aa20.95■□□□□ 0.94
VIPAS39-210ENST00000557466 EVC2Q86UK5 1308 aa20.95■□□□□ 0.94
VIPAS39-210ENST00000557466 SRPK2P78362 688 aaKnown RBP20.93■□□□□ 0.94
VIPAS39-210ENST00000557466 DDX17Q92841 729 aaKnown RBP20.93■□□□□ 0.94
VIPAS39-210ENST00000557466 NUDT16Q96DE0 195 aaKnown RBP20.93■□□□□ 0.94
VIPAS39-210ENST00000557466 CABP2Q9NPB3 220 aa20.93■□□□□ 0.94
VIPAS39-210ENST00000557466 PXDNQ92626 1479 aa20.92■□□□□ 0.94
VIPAS39-210ENST00000557466 PHF8Q9UPP1 1060 aa20.91■□□□□ 0.94
VIPAS39-210ENST00000557466 DISP3Q9P2K9 1392 aa20.89■□□□□ 0.93
VIPAS39-210ENST00000557466 EIF4G2P78344 907 aaKnown RBP eCLIP20.89■□□□□ 0.93
VIPAS39-210ENST00000557466 TRPM3Q9HCF6 1732 aaPredicted RBP20.89■□□□□ 0.93
VIPAS39-210ENST00000557466 SHPRHQ149N8 1683 aa20.89■□□□□ 0.93
VIPAS39-210ENST00000557466 PPIP5K1Q6PFW1 1433 aa20.88■□□□□ 0.93
VIPAS39-210ENST00000557466 NPHP3Q7Z494 1330 aa20.88■□□□□ 0.93
VIPAS39-210ENST00000557466 FOXO3O43524 673 aa20.88■□□□□ 0.93
VIPAS39-210ENST00000557466 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
VIPAS39-210ENST00000557466 PMFBP1Q8TBY8 1022 aa20.88■□□□□ 0.93
VIPAS39-210ENST00000557466 AKAP12Q02952 1782 aa20.87■□□□□ 0.93
VIPAS39-210ENST00000557466 CCDC61Q9Y6R9 512 aa20.87■□□□□ 0.93
VIPAS39-210ENST00000557466 ATAD2Q6PL18 1390 aa20.86■□□□□ 0.93
VIPAS39-210ENST00000557466 SOS2Q07890 1332 aaPredicted RBP20.86■□□□□ 0.93
VIPAS39-210ENST00000557466 XPCQ01831 940 aaPredicted RBP20.85■□□□□ 0.93
VIPAS39-210ENST00000557466 MYOM1P52179 1685 aa20.84■□□□□ 0.93
VIPAS39-210ENST00000557466 POLR3AO14802 1390 aaPredicted RBP20.84■□□□□ 0.93
VIPAS39-210ENST00000557466 ALS2Q96Q42 1657 aa20.83■□□□□ 0.92
VIPAS39-210ENST00000557466 MON2Q7Z3U7 1717 aa20.82■□□□□ 0.92
VIPAS39-210ENST00000557466 PLEKHG3A1L390 1219 aa20.82■□□□□ 0.92
VIPAS39-210ENST00000557466 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
VIPAS39-210ENST00000557466 TMF1P82094 1093 aa20.82■□□□□ 0.92
VIPAS39-210ENST00000557466 COL22A1Q8NFW1 1626 aaPredicted RBP20.82■□□□□ 0.92
VIPAS39-210ENST00000557466 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
VIPAS39-210ENST00000557466 JCADQ9P266 1359 aa20.81■□□□□ 0.92
VIPAS39-210ENST00000557466 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
VIPAS39-210ENST00000557466 ACEP12821 1306 aa20.8■□□□□ 0.92
VIPAS39-210ENST00000557466 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
VIPAS39-210ENST00000557466 CABP1Q9NZU7 370 aa20.8■□□□□ 0.92
VIPAS39-210ENST00000557466 PUS7Q96PZ0 661 aaKnown RBP20.79■□□□□ 0.92
VIPAS39-210ENST00000557466 PNPLA6Q8IY17 1366 aa20.79■□□□□ 0.92
VIPAS39-210ENST00000557466 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
VIPAS39-210ENST00000557466 CD163L1Q9NR16 1453 aa20.78■□□□□ 0.92
VIPAS39-210ENST00000557466 SBNO1A3KN83 1393 aa20.78■□□□□ 0.92
VIPAS39-210ENST00000557466 PSME1Q06323 249 aa20.78■□□□□ 0.92
VIPAS39-210ENST00000557466 LRRC59Q96AG4 307 aaKnown RBP20.78■□□□□ 0.92
VIPAS39-210ENST00000557466 ABCA3Q99758 1704 aa20.78■□□□□ 0.92
VIPAS39-210ENST00000557466 USP6P35125 1406 aa20.76■□□□□ 0.91
VIPAS39-210ENST00000557466 CPSF1Q10570 1443 aaKnown RBP20.76■□□□□ 0.91
VIPAS39-210ENST00000557466 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
VIPAS39-210ENST00000557466 SPATA31A3Q5VYP0 1347 aa20.76■□□□□ 0.91
VIPAS39-210ENST00000557466 CRYBG1Q9Y4K1 1723 aa20.75■□□□□ 0.91
VIPAS39-210ENST00000557466 ZEB1P37275 1124 aaPredicted RBP20.75■□□□□ 0.91
VIPAS39-210ENST00000557466 NINLQ9Y2I6 1382 aa20.74■□□□□ 0.91
VIPAS39-210ENST00000557466 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
VIPAS39-210ENST00000557466 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
VIPAS39-210ENST00000557466 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
VIPAS39-210ENST00000557466 LRP6O75581 1613 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms