RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SLC24A1O60721 1099 aa23.04■■□□□ 1.28
XRCC3-218ENST00000557439 MTHFSP49914 203 aa23.04■■□□□ 1.28
XRCC3-218ENST00000557439 IGHDP01880 384 aa23.03■■□□□ 1.28
XRCC3-218ENST00000557439 FRAT1Q92837 279 aaPredicted RBP23.03■■□□□ 1.28
XRCC3-218ENST00000557439 COG6Q9Y2V7 657 aa23.03■■□□□ 1.28
XRCC3-218ENST00000557439 C8orf34Q49A92 452 aa23.02■■□□□ 1.28
XRCC3-218ENST00000557439 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
XRCC3-218ENST00000557439 TNNQ9UQP3 1299 aa23.02■■□□□ 1.28
XRCC3-218ENST00000557439 TCP11L2Q8N4U5 519 aa23.02■■□□□ 1.28
XRCC3-218ENST00000557439 BCL2L13Q9BXK5 485 aa23.02■■□□□ 1.28
XRCC3-218ENST00000557439 STK26Q9P289 416 aa23.01■■□□□ 1.27
XRCC3-218ENST00000557439 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
XRCC3-218ENST00000557439 SIGLEC1Q9BZZ2 1709 aa23.01■■□□□ 1.27
XRCC3-218ENST00000557439 SETBP1Q9Y6X0 1596 aa23.01■■□□□ 1.27
XRCC3-218ENST00000557439 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
XRCC3-218ENST00000557439 NEFMP07197 916 aa23■■□□□ 1.27
XRCC3-218ENST00000557439 ZC3H13Q5T200 1668 aaKnown RBP22.99■■□□□ 1.27
XRCC3-218ENST00000557439 ABCC3O15438 1527 aa22.99■■□□□ 1.27
XRCC3-218ENST00000557439 HECW2Q9P2P5 1572 aa22.98■■□□□ 1.27
XRCC3-218ENST00000557439 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
XRCC3-218ENST00000557439 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
XRCC3-218ENST00000557439 RUNDC1Q96C34 613 aa22.97■■□□□ 1.27
XRCC3-218ENST00000557439 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
XRCC3-218ENST00000557439 IDI1Q13907 227 aa22.95■■□□□ 1.26
XRCC3-218ENST00000557439 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.26
XRCC3-218ENST00000557439 GLI2P10070 1586 aa22.94■■□□□ 1.26
XRCC3-218ENST00000557439 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
XRCC3-218ENST00000557439 CLUAP1Q96AJ1 413 aa22.93■■□□□ 1.26
XRCC3-218ENST00000557439 RLBP1P12271 317 aa22.93■■□□□ 1.26
XRCC3-218ENST00000557439 CAMSAP1Q5T5Y3 1602 aa22.92■■□□□ 1.26
XRCC3-218ENST00000557439 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
XRCC3-218ENST00000557439 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.26
XRCC3-218ENST00000557439 EVC2Q86UK5 1308 aa22.91■■□□□ 1.26
XRCC3-218ENST00000557439 RARSP54136 660 aaKnown RBP22.91■■□□□ 1.26
XRCC3-218ENST00000557439 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
XRCC3-218ENST00000557439 VGFO15240 615 aaPredicted RBP22.9■■□□□ 1.26
XRCC3-218ENST00000557439 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
XRCC3-218ENST00000557439 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
XRCC3-218ENST00000557439 SRPK2P78362 688 aaKnown RBP22.89■■□□□ 1.25
XRCC3-218ENST00000557439 IQSEC2Q5JU85 1478 aa22.89■■□□□ 1.25
XRCC3-218ENST00000557439 ARHGEF28Q8N1W1 1705 aaKnown RBP22.89■■□□□ 1.25
XRCC3-218ENST00000557439 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
XRCC3-218ENST00000557439 PDE3AQ14432 1141 aa22.88■■□□□ 1.25
XRCC3-218ENST00000557439 MINK1Q8N4C8 1332 aaPredicted RBP22.88■■□□□ 1.25
XRCC3-218ENST00000557439 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
XRCC3-218ENST00000557439 YEATS2Q9ULM3 1422 aa22.87■■□□□ 1.25
XRCC3-218ENST00000557439 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
XRCC3-218ENST00000557439 CFAP74Q9C0B2 1584 aa22.86■■□□□ 1.25
XRCC3-218ENST00000557439 U2SURPO15042 1029 aaKnown RBP22.86■■□□□ 1.25
XRCC3-218ENST00000557439 TSR2Q969E8 191 aaKnown RBP22.86■■□□□ 1.25
XRCC3-218ENST00000557439 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
XRCC3-218ENST00000557439 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
XRCC3-218ENST00000557439 SEC24BO95487 1268 aa22.85■■□□□ 1.25
XRCC3-218ENST00000557439 PCDHB15Q9Y5E8 787 aa22.85■■□□□ 1.25
XRCC3-218ENST00000557439 A0A1W2PP64 1363 aa22.85■■□□□ 1.25
XRCC3-218ENST00000557439 DIP2CQ9Y2E4 1556 aa22.84■■□□□ 1.25
XRCC3-218ENST00000557439 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
XRCC3-218ENST00000557439 MYO5BQ9ULV0 1848 aa22.84■■□□□ 1.25
XRCC3-218ENST00000557439 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
XRCC3-218ENST00000557439 DAXXQ9UER7 740 aaPredicted RBP22.82■■□□□ 1.24
XRCC3-218ENST00000557439 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
XRCC3-218ENST00000557439 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
XRCC3-218ENST00000557439 PRAM1Q96QH2 718 aa22.81■■□□□ 1.24
XRCC3-218ENST00000557439 FBLN1P23142 703 aa22.8■■□□□ 1.24
XRCC3-218ENST00000557439 USP32Q8NFA0 1604 aa22.79■■□□□ 1.24
XRCC3-218ENST00000557439 NFKBIBQ15653 356 aa22.78■■□□□ 1.24
XRCC3-218ENST00000557439 USP19O94966 1318 aa22.77■■□□□ 1.24
XRCC3-218ENST00000557439 POGKQ9P215 609 aa22.77■■□□□ 1.24
XRCC3-218ENST00000557439 FYB1O15117 783 aa22.76■■□□□ 1.23
XRCC3-218ENST00000557439 NEO1Q92859 1461 aa22.75■■□□□ 1.23
XRCC3-218ENST00000557439 EXOSC9Q06265 439 aaKnown RBP22.75■■□□□ 1.23
XRCC3-218ENST00000557439 CCDC27Q2M243 656 aa22.75■■□□□ 1.23
XRCC3-218ENST00000557439 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
XRCC3-218ENST00000557439 MYH16Q9H6N6 1097 aa22.74■■□□□ 1.23
XRCC3-218ENST00000557439 ABCC11Q96J66 1382 aa22.74■■□□□ 1.23
XRCC3-218ENST00000557439 PLEKHF1Q96S99 279 aa22.73■■□□□ 1.23
XRCC3-218ENST00000557439 SLC52A1Q9NWF4 448 aa22.73■■□□□ 1.23
XRCC3-218ENST00000557439 USP35Q9P2H5 1018 aa22.73■■□□□ 1.23
XRCC3-218ENST00000557439 PDZRN3Q9UPQ7 1066 aa22.73■■□□□ 1.23
XRCC3-218ENST00000557439 RICTORQ6R327 1708 aa22.72■■□□□ 1.23
XRCC3-218ENST00000557439 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
XRCC3-218ENST00000557439 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
XRCC3-218ENST00000557439 NSD2O96028 1365 aa22.72■■□□□ 1.23
XRCC3-218ENST00000557439 PTPRMP28827 1452 aa22.71■■□□□ 1.23
XRCC3-218ENST00000557439 PUS7Q96PZ0 661 aaKnown RBP22.71■■□□□ 1.23
XRCC3-218ENST00000557439 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
XRCC3-218ENST00000557439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.7■■□□□ 1.22
XRCC3-218ENST00000557439 SMC4Q9NTJ3 1288 aa22.7■■□□□ 1.22
XRCC3-218ENST00000557439 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
XRCC3-218ENST00000557439 CD163L1Q9NR16 1453 aa22.69■■□□□ 1.22
XRCC3-218ENST00000557439 CDK19Q9BWU1 502 aa22.69■■□□□ 1.22
XRCC3-218ENST00000557439 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
XRCC3-218ENST00000557439 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
XRCC3-218ENST00000557439 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
XRCC3-218ENST00000557439 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
XRCC3-218ENST00000557439 YTHDC2Q9H6S0 1430 aaKnown RBP22.69■■□□□ 1.22
XRCC3-218ENST00000557439 WAPLQ7Z5K2 1190 aa22.68■■□□□ 1.22
XRCC3-218ENST00000557439 PMFBP1Q8TBY8 1022 aa22.68■■□□□ 1.22
XRCC3-218ENST00000557439 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
XRCC3-218ENST00000557439 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms