RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
SV2B-206ENST00000557410 KIDINS220Q9ULH0 1771 aa10.08□□□□□ -0.8
SV2B-206ENST00000557410 PPRC1Q5VV67 1664 aaKnown RBP10.08□□□□□ -0.8
SV2B-206ENST00000557410 MORC1Q86VD1 984 aa10.08□□□□□ -0.8
SV2B-206ENST00000557410 CD109Q6YHK3 1445 aa10.08□□□□□ -0.8
SV2B-206ENST00000557410 MROH2AA6NES4 1674 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 GOLGA6L22H0YM25 854 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
SV2B-206ENST00000557410 TMEM132EQ6IEE7 984 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
SV2B-206ENST00000557410 EID1Q9Y6B2 187 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 E9PSI1 815 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 RAPGEF3O95398 923 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 STK26Q9P289 416 aa10.07□□□□□ -0.8
SV2B-206ENST00000557410 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
SV2B-206ENST00000557410 SLC12A5Q9H2X9 1139 aa10.05□□□□□ -0.8
SV2B-206ENST00000557410 IFT172Q9UG01 1749 aa10.05□□□□□ -0.8
SV2B-206ENST00000557410 NKTRP30414 1462 aaKnown RBP10.05□□□□□ -0.8
SV2B-206ENST00000557410 NSD3Q9BZ95 1437 aa10.05□□□□□ -0.8
SV2B-206ENST00000557410 GZF1Q9H116 711 aaPredicted RBP10.05□□□□□ -0.8
SV2B-206ENST00000557410 C14orf93Q9H972 538 aaKnown RBP10.05□□□□□ -0.8
SV2B-206ENST00000557410 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 BCAR3O75815 825 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 LMTK2Q8IWU2 1503 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 TRMT2AQ8IZ69 625 aaKnown RBP10.04□□□□□ -0.8
SV2B-206ENST00000557410 NGEFQ8N5V2 710 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 NPATQ14207 1427 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 KDM2BQ8NHM5 1336 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 ADGRB3O60242 1522 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
SV2B-206ENST00000557410 TPRNQ4KMQ1 711 aa10.03□□□□□ -0.8
SV2B-206ENST00000557410 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
SV2B-206ENST00000557410 RPGRIP1LQ68CZ1 1315 aa10.03□□□□□ -0.8
SV2B-206ENST00000557410 DMRT2Q9Y5R5 561 aa10.02□□□□□ -0.8
SV2B-206ENST00000557410 POLR3AO14802 1390 aaPredicted RBP10.02□□□□□ -0.8
SV2B-206ENST00000557410 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
SV2B-206ENST00000557410 CLUAP1Q96AJ1 413 aa10.02□□□□□ -0.81
SV2B-206ENST00000557410 RRP7AQ9Y3A4 280 aaKnown RBP10.02□□□□□ -0.81
SV2B-206ENST00000557410 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.81
SV2B-206ENST00000557410 SETBP1Q9Y6X0 1596 aa10.02□□□□□ -0.81
SV2B-206ENST00000557410 CFAP74Q9C0B2 1584 aa10.02□□□□□ -0.81
SV2B-206ENST00000557410 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
SV2B-206ENST00000557410 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 QRICH2Q9H0J4 1663 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 HECW2Q9P2P5 1572 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 MLH3Q9UHC1 1453 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
SV2B-206ENST00000557410 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
SV2B-206ENST00000557410 RUNDC1Q96C34 613 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 PPLO60437 1756 aa10.01□□□□□ -0.81
SV2B-206ENST00000557410 EVC2Q86UK5 1308 aa10□□□□□ -0.81
SV2B-206ENST00000557410 MTHFSP49914 203 aa10□□□□□ -0.81
SV2B-206ENST00000557410 FAM161AQ3B820 660 aa10□□□□□ -0.81
SV2B-206ENST00000557410 HSCBQ8IWL3 235 aa10□□□□□ -0.81
SV2B-206ENST00000557410 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
SV2B-206ENST00000557410 TCP11L2Q8N4U5 519 aa9.99□□□□□ -0.81
SV2B-206ENST00000557410 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
SV2B-206ENST00000557410 FRMPD1Q5SYB0 1578 aa9.99□□□□□ -0.81
SV2B-206ENST00000557410 ABCC3O15438 1527 aa9.99□□□□□ -0.81
SV2B-206ENST00000557410 PTMAP06454 111 aaKnown RBP9.98□□□□□ -0.81
SV2B-206ENST00000557410 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
SV2B-206ENST00000557410 U2AF1L5P0DN76 240 aaPredicted RBP9.98□□□□□ -0.81
SV2B-206ENST00000557410 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.81
SV2B-206ENST00000557410 PANK1Q8TE04 598 aa9.98□□□□□ -0.81
SV2B-206ENST00000557410 CABP2Q9NPB3 220 aa9.98□□□□□ -0.81
SV2B-206ENST00000557410 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
SV2B-206ENST00000557410 ZBTB7CA1YPR0 619 aa9.98□□□□□ -0.81
SV2B-206ENST00000557410 PDE3AQ14432 1141 aa9.97□□□□□ -0.81
SV2B-206ENST00000557410 LMOD2Q6P5Q4 547 aa9.97□□□□□ -0.81
SV2B-206ENST00000557410 ADGRB1O14514 1584 aa9.97□□□□□ -0.81
SV2B-206ENST00000557410 GSE1Q14687 1217 aa9.97□□□□□ -0.81
SV2B-206ENST00000557410 ZC3H13Q5T200 1668 aaKnown RBP9.97□□□□□ -0.81
SV2B-206ENST00000557410 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.81
SV2B-206ENST00000557410 CAMSAP1Q5T5Y3 1602 aa9.96□□□□□ -0.81
SV2B-206ENST00000557410 DNTTIP2Q5QJE6 756 aaKnown RBP9.96□□□□□ -0.82
SV2B-206ENST00000557410 GLI2P10070 1586 aa9.96□□□□□ -0.82
SV2B-206ENST00000557410 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.82
SV2B-206ENST00000557410 IDI1Q13907 227 aa9.96□□□□□ -0.82
SV2B-206ENST00000557410 C8orf34Q49A92 452 aa9.96□□□□□ -0.82
SV2B-206ENST00000557410 IGHDP01880 384 aa9.95□□□□□ -0.82
SV2B-206ENST00000557410 BCL2L13Q9BXK5 485 aa9.95□□□□□ -0.82
SV2B-206ENST00000557410 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
SV2B-206ENST00000557410 WDR63Q8IWG1 891 aa9.95□□□□□ -0.82
SV2B-206ENST00000557410 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
SV2B-206ENST00000557410 SHPRHQ149N8 1683 aa9.95□□□□□ -0.82
SV2B-206ENST00000557410 PNNQ9H307 717 aaKnown RBP9.94□□□□□ -0.82
SV2B-206ENST00000557410 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
SV2B-206ENST00000557410 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
SV2B-206ENST00000557410 ITPRIPQ8IWB1 547 aa9.94□□□□□ -0.82
SV2B-206ENST00000557410 PUS7Q96PZ0 661 aaKnown RBP9.94□□□□□ -0.82
SV2B-206ENST00000557410 CASC1Q6TDU7 716 aa9.94□□□□□ -0.82
SV2B-206ENST00000557410 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.94□□□□□ -0.82
SV2B-206ENST00000557410 NEO1Q92859 1461 aa9.94□□□□□ -0.82
SV2B-206ENST00000557410 SIGLEC1Q9BZZ2 1709 aa9.94□□□□□ -0.82
SV2B-206ENST00000557410 NSD2O96028 1365 aa9.93□□□□□ -0.82
SV2B-206ENST00000557410 APBB1O00213 710 aa9.93□□□□□ -0.82
SV2B-206ENST00000557410 SLC52A1Q9NWF4 448 aa9.93□□□□□ -0.82
SV2B-206ENST00000557410 MINK1Q8N4C8 1332 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms