RNA–Protein interactions for RNA: ENST00000557351.1

RPGRIP1-211, Transcript of RPGR interacting protein 1, humanhuman

TSL 4

Gene RPGRIP1, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-211ENST00000557351 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
RPGRIP1-211ENST00000557351 ITGBL1O95965 494 aaPredicted RBP8.89□□□□□ -0.99
RPGRIP1-211ENST00000557351 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
RPGRIP1-211ENST00000557351 ZNF516Q92618 1163 aa8.89□□□□□ -0.99
RPGRIP1-211ENST00000557351 NR1I2O75469 434 aa8.88□□□□□ -0.99
RPGRIP1-211ENST00000557351 ZPR1O75312 459 aa8.86□□□□□ -0.99
RPGRIP1-211ENST00000557351 USP46P62068 366 aa8.86□□□□□ -0.99
RPGRIP1-211ENST00000557351 MORN1Q5T089 497 aa8.86□□□□□ -0.99
RPGRIP1-211ENST00000557351 SPIRE2Q8WWL2 714 aa8.86□□□□□ -0.99
RPGRIP1-211ENST00000557351 HLA-CQ95604 372 aa8.86□□□□□ -0.99
RPGRIP1-211ENST00000557351 HOXA2O43364 376 aa8.85□□□□□ -0.99
RPGRIP1-211ENST00000557351 TLL1O43897 1013 aa8.85□□□□□ -0.99
RPGRIP1-211ENST00000557351 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
RPGRIP1-211ENST00000557351 GUCA2AQ02747 115 aa8.85□□□□□ -0.99
RPGRIP1-211ENST00000557351 SCUBE3Q8IX30 993 aa8.85□□□□□ -0.99
RPGRIP1-211ENST00000557351 SLC27A5Q9Y2P5 690 aa8.85□□□□□ -0.99
RPGRIP1-211ENST00000557351 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
RPGRIP1-211ENST00000557351 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
RPGRIP1-211ENST00000557351 FAM117AQ9C073 453 aa8.83□□□□□ -1
RPGRIP1-211ENST00000557351 ZNF608Q9ULD9 1512 aaPredicted RBP8.82□□□□□ -1
RPGRIP1-211ENST00000557351 MOXD2PA6NHM9 499 aa8.82□□□□□ -1
RPGRIP1-211ENST00000557351 SUPT5HO00267 1087 aaKnown RBP8.82□□□□□ -1
RPGRIP1-211ENST00000557351 NDUFV2P19404 249 aa8.82□□□□□ -1
RPGRIP1-211ENST00000557351 DIXDC1Q155Q3 683 aa8.82□□□□□ -1
RPGRIP1-211ENST00000557351 PRDM2Q13029 1718 aa8.81□□□□□ -1
RPGRIP1-211ENST00000557351 IFFO2Q5TF58 517 aa8.81□□□□□ -1
RPGRIP1-211ENST00000557351 DDRGK1Q96HY6 314 aa8.81□□□□□ -1
RPGRIP1-211ENST00000557351 TOPBP1Q92547 1522 aa8.8□□□□□ -1
RPGRIP1-211ENST00000557351 FMNL1O95466 1100 aaPredicted RBP8.8□□□□□ -1
RPGRIP1-211ENST00000557351 FDX1P10109 184 aa8.8□□□□□ -1
RPGRIP1-211ENST00000557351 RNF19BQ6ZMZ0 732 aa8.8□□□□□ -1
RPGRIP1-211ENST00000557351 SPSB2Q99619 263 aa8.8□□□□□ -1
RPGRIP1-211ENST00000557351 ADH1BP00325 375 aa8.79□□□□□ -1
RPGRIP1-211ENST00000557351 Q3C1V9 767 aa8.79□□□□□ -1
RPGRIP1-211ENST00000557351 MYSM1Q5VVJ2 828 aa8.78□□□□□ -1
RPGRIP1-211ENST00000557351 IL27Q8NEV9 243 aa8.78□□□□□ -1
RPGRIP1-211ENST00000557351 ATP1B4Q9UN42 357 aaPredicted RBP8.78□□□□□ -1
RPGRIP1-211ENST00000557351 A0A0G2JS52 829 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 C6orf229H3BNL8 230 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 CSPP1Q1MSJ5 1256 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 RIC3Q7Z5B4 369 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 THAP11Q96EK4 314 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
RPGRIP1-211ENST00000557351 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 S1PR4O95977 384 aa8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 PPP1R18Q6NYC8 613 aa8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 RSBN1LQ6PCB5 846 aaPredicted RBP8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 BRICD5Q6PL45 260 aa8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 POLR3EQ9NVU0 708 aa8.76□□□□□ -1.01
RPGRIP1-211ENST00000557351 GGCXP38435 758 aa8.75□□□□□ -1.01
RPGRIP1-211ENST00000557351 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
RPGRIP1-211ENST00000557351 IFT140Q96RY7 1462 aa8.75□□□□□ -1.01
RPGRIP1-211ENST00000557351 RAD54L2Q9Y4B4 1467 aa8.75□□□□□ -1.01
RPGRIP1-211ENST00000557351 DNMBPQ6XZF7 1577 aa8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 SPTLC1O15269 473 aa8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 CLK2P49760 499 aaKnown RBP8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 USB1Q9BQ65 265 aaKnown RBP8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 LIMD1Q9UGP4 676 aa8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 PCDHB15Q9Y5E8 787 aa8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.01
RPGRIP1-211ENST00000557351 TARBP1Q13395 1621 aaKnown RBP8.73□□□□□ -1.01
RPGRIP1-211ENST00000557351 POLA1P09884 1462 aaPredicted RBP8.73□□□□□ -1.01
RPGRIP1-211ENST00000557351 CUX1P39880 1505 aa8.73□□□□□ -1.01
RPGRIP1-211ENST00000557351 PPEF1O14829 653 aaPredicted RBP8.72□□□□□ -1.01
RPGRIP1-211ENST00000557351 GJA5P36382 358 aa8.72□□□□□ -1.01
RPGRIP1-211ENST00000557351 MTMR2Q13614 643 aa8.72□□□□□ -1.01
RPGRIP1-211ENST00000557351 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
RPGRIP1-211ENST00000557351 FAM160A2Q8N612 972 aaPredicted RBP8.72□□□□□ -1.01
RPGRIP1-211ENST00000557351 RETREG3Q86VR2 466 aa8.71□□□□□ -1.02
RPGRIP1-211ENST00000557351 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
RPGRIP1-211ENST00000557351 TDRD9Q8NDG6 1382 aaKnown RBP8.71□□□□□ -1.02
RPGRIP1-211ENST00000557351 ABCC8Q09428 1581 aa8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
RPGRIP1-211ENST00000557351 EIF4G3O43432 1585 aaKnown RBP8.69□□□□□ -1.02
RPGRIP1-211ENST00000557351 HRCP23327 699 aa8.69□□□□□ -1.02
RPGRIP1-211ENST00000557351 QPCTQ16769 361 aa8.69□□□□□ -1.02
RPGRIP1-211ENST00000557351 SOGA1O94964 1423 aa8.69□□□□□ -1.02
RPGRIP1-211ENST00000557351 FGD5Q6ZNL6 1462 aa8.69□□□□□ -1.02
RPGRIP1-211ENST00000557351 PROCA1Q8NCQ7 364 aaPredicted RBP8.68□□□□□ -1.02
RPGRIP1-211ENST00000557351 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
RPGRIP1-211ENST00000557351 TSC1Q92574 1164 aa8.68□□□□□ -1.02
RPGRIP1-211ENST00000557351 SPDYE5A6NIY4 337 aa8.67□□□□□ -1.02
RPGRIP1-211ENST00000557351 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
RPGRIP1-211ENST00000557351 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
RPGRIP1-211ENST00000557351 FCF1Q9Y324 198 aaKnown RBP8.67□□□□□ -1.02
RPGRIP1-211ENST00000557351 JUNDP17535 347 aa8.66□□□□□ -1.02
RPGRIP1-211ENST00000557351 TUSC1Q2TAM9 212 aa8.66□□□□□ -1.02
RPGRIP1-211ENST00000557351 ANKLE1Q8NAG6 615 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms