RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 KIF1BO60333 1816 aa16.84■□□□□ 0.29
HNRNPC-231ENST00000557336 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
HNRNPC-231ENST00000557336 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
HNRNPC-231ENST00000557336 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
HNRNPC-231ENST00000557336 NHSL1Q5SYE7 1610 aa16.83■□□□□ 0.28
HNRNPC-231ENST00000557336 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
HNRNPC-231ENST00000557336 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
HNRNPC-231ENST00000557336 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
HNRNPC-231ENST00000557336 POLA2Q14181 598 aa16.81■□□□□ 0.28
HNRNPC-231ENST00000557336 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
HNRNPC-231ENST00000557336 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
HNRNPC-231ENST00000557336 ZNF772Q68DY9 489 aaPredicted RBP16.8■□□□□ 0.28
HNRNPC-231ENST00000557336 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
HNRNPC-231ENST00000557336 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
HNRNPC-231ENST00000557336 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
HNRNPC-231ENST00000557336 PNPLA6Q8IY17 1366 aa16.79■□□□□ 0.28
HNRNPC-231ENST00000557336 ADGRF5Q8IZF2 1346 aa16.79■□□□□ 0.28
HNRNPC-231ENST00000557336 MPHOSPH9Q99550 1183 aa16.78■□□□□ 0.28
HNRNPC-231ENST00000557336 PPLO60437 1756 aa16.78■□□□□ 0.28
HNRNPC-231ENST00000557336 AFF2P51816 1311 aa16.76■□□□□ 0.27
HNRNPC-231ENST00000557336 SOS2Q07890 1332 aaPredicted RBP16.76■□□□□ 0.27
HNRNPC-231ENST00000557336 LAMC1P11047 1609 aa16.76■□□□□ 0.27
HNRNPC-231ENST00000557336 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
HNRNPC-231ENST00000557336 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
HNRNPC-231ENST00000557336 RXRBP28702 533 aa16.73■□□□□ 0.27
HNRNPC-231ENST00000557336 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
HNRNPC-231ENST00000557336 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
HNRNPC-231ENST00000557336 TECPR2O15040 1411 aa16.71■□□□□ 0.27
HNRNPC-231ENST00000557336 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.27
HNRNPC-231ENST00000557336 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
HNRNPC-231ENST00000557336 LRPPRCP42704 1394 aaKnown RBP16.7■□□□□ 0.26
HNRNPC-231ENST00000557336 ANKRD30BQ9BXX2 1392 aa16.7■□□□□ 0.26
HNRNPC-231ENST00000557336 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
HNRNPC-231ENST00000557336 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
HNRNPC-231ENST00000557336 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
HNRNPC-231ENST00000557336 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
HNRNPC-231ENST00000557336 STK26Q9P289 416 aa16.69■□□□□ 0.26
HNRNPC-231ENST00000557336 IFT172Q9UG01 1749 aa16.69■□□□□ 0.26
HNRNPC-231ENST00000557336 PIK3C2GO75747 1445 aa16.69■□□□□ 0.26
HNRNPC-231ENST00000557336 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
HNRNPC-231ENST00000557336 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
HNRNPC-231ENST00000557336 PXDNQ92626 1479 aa16.67■□□□□ 0.26
HNRNPC-231ENST00000557336 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
HNRNPC-231ENST00000557336 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
HNRNPC-231ENST00000557336 RGS12O14924 1447 aa16.65■□□□□ 0.26
HNRNPC-231ENST00000557336 FOXO3O43524 673 aa16.65■□□□□ 0.26
HNRNPC-231ENST00000557336 NGLY1Q96IV0 654 aa16.65■□□□□ 0.26
HNRNPC-231ENST00000557336 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 MYOM2P54296 1465 aa16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
HNRNPC-231ENST00000557336 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
HNRNPC-231ENST00000557336 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
HNRNPC-231ENST00000557336 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
HNRNPC-231ENST00000557336 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
HNRNPC-231ENST00000557336 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
HNRNPC-231ENST00000557336 EP400Q96L91 3159 aa16.62■□□□□ 0.25
HNRNPC-231ENST00000557336 KNDC1Q76NI1 1749 aa16.61■□□□□ 0.25
HNRNPC-231ENST00000557336 USP21Q9UK80 565 aa16.6■□□□□ 0.25
HNRNPC-231ENST00000557336 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
HNRNPC-231ENST00000557336 ATRNO75882 1429 aa16.58■□□□□ 0.24
HNRNPC-231ENST00000557336 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.24
HNRNPC-231ENST00000557336 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
HNRNPC-231ENST00000557336 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
HNRNPC-231ENST00000557336 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
HNRNPC-231ENST00000557336 TRPC5Q9UL62 973 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-231ENST00000557336 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
HNRNPC-231ENST00000557336 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
HNRNPC-231ENST00000557336 PRAM1Q96QH2 718 aa16.54■□□□□ 0.24
HNRNPC-231ENST00000557336 ADGRB1O14514 1584 aa16.53■□□□□ 0.24
HNRNPC-231ENST00000557336 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
HNRNPC-231ENST00000557336 PHF8Q9UPP1 1060 aa16.51■□□□□ 0.23
HNRNPC-231ENST00000557336 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
HNRNPC-231ENST00000557336 SLIT2O94813 1529 aa16.5■□□□□ 0.23
HNRNPC-231ENST00000557336 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-231ENST00000557336 CABLES1Q8TDN4 633 aa16.49■□□□□ 0.23
HNRNPC-231ENST00000557336 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-231ENST00000557336 KIF1AQ12756 1690 aa16.49■□□□□ 0.23
HNRNPC-231ENST00000557336 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
HNRNPC-231ENST00000557336 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
HNRNPC-231ENST00000557336 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
HNRNPC-231ENST00000557336 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
HNRNPC-231ENST00000557336 PRR36Q9H6K5 1346 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 TNS3Q68CZ2 1445 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 HRCP23327 699 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
HNRNPC-231ENST00000557336 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
HNRNPC-231ENST00000557336 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
HNRNPC-231ENST00000557336 POGKQ9P215 609 aa16.45■□□□□ 0.22
HNRNPC-231ENST00000557336 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
HNRNPC-231ENST00000557336 GLI3P10071 1580 aa16.45■□□□□ 0.22
HNRNPC-231ENST00000557336 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
HNRNPC-231ENST00000557336 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms