RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SIRT1Q96EB6 747 aa29.91■■■□□ 2.38
SEC23A-213ENST00000557280 DCCP43146 1447 aa29.88■■■□□ 2.37
SEC23A-213ENST00000557280 TOM1O60784 492 aa29.87■■■□□ 2.37
SEC23A-213ENST00000557280 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
SEC23A-213ENST00000557280 PIP4K2BP78356 416 aa29.86■■■□□ 2.37
SEC23A-213ENST00000557280 POGKQ9P215 609 aa29.86■■■□□ 2.37
SEC23A-213ENST00000557280 MST1RQ04912 1400 aa29.83■■■□□ 2.37
SEC23A-213ENST00000557280 ATF3P18847 181 aa29.83■■■□□ 2.37
SEC23A-213ENST00000557280 CADPS2Q86UW7 1296 aa29.82■■■□□ 2.36
SEC23A-213ENST00000557280 SCAF1Q9H7N4 1312 aaKnown RBP29.81■■■□□ 2.36
SEC23A-213ENST00000557280 CARD11Q9BXL7 1154 aa29.81■■■□□ 2.36
SEC23A-213ENST00000557280 ADGRB2O60241 1585 aa29.81■■■□□ 2.36
SEC23A-213ENST00000557280 MINK1Q8N4C8 1332 aaPredicted RBP29.79■■■□□ 2.36
SEC23A-213ENST00000557280 ILDR1Q86SU0 546 aaPredicted RBP29.79■■■□□ 2.36
SEC23A-213ENST00000557280 HIRIP3Q9BW71 556 aaPredicted RBP29.79■■■□□ 2.36
SEC23A-213ENST00000557280 SLAIN2Q9P270 581 aa29.78■■■□□ 2.36
SEC23A-213ENST00000557280 QRICH2Q9H0J4 1663 aa29.77■■■□□ 2.36
SEC23A-213ENST00000557280 ROBO1Q9Y6N7 1651 aa29.77■■■□□ 2.36
SEC23A-213ENST00000557280 FMN2Q9NZ56 1722 aa29.76■■■□□ 2.36
SEC23A-213ENST00000557280 CENPJQ9HC77 1338 aaPredicted RBP29.75■■■□□ 2.35
SEC23A-213ENST00000557280 C1orf167Q5SNV9 1468 aa29.74■■■□□ 2.35
SEC23A-213ENST00000557280 NUTM2FA1L443 756 aa29.72■■■□□ 2.35
SEC23A-213ENST00000557280 EIF3AQ14152 1382 aaKnown RBP29.71■■■□□ 2.35
SEC23A-213ENST00000557280 USP32Q8NFA0 1604 aa29.69■■■□□ 2.34
SEC23A-213ENST00000557280 BRINP3Q76B58 766 aa29.67■■■□□ 2.34
SEC23A-213ENST00000557280 TULP4Q9NRJ4 1543 aa29.66■■■□□ 2.34
SEC23A-213ENST00000557280 USP47Q96K76 1375 aa29.65■■■□□ 2.34
SEC23A-213ENST00000557280 WASLO00401 505 aaPredicted RBP29.65■■■□□ 2.34
SEC23A-213ENST00000557280 ORAI2Q96SN7 254 aa29.65■■■□□ 2.34
SEC23A-213ENST00000557280 PRR36Q9H6K5 1346 aa29.63■■■□□ 2.33
SEC23A-213ENST00000557280 RGPD8O14715 1765 aaPredicted RBP29.62■■■□□ 2.33
SEC23A-213ENST00000557280 HSPA1LP34931 641 aa29.62■■■□□ 2.33
SEC23A-213ENST00000557280 CDK19Q9BWU1 502 aa29.6■■■□□ 2.33
SEC23A-213ENST00000557280 ANKARQ7Z5J8 1434 aa29.6■■■□□ 2.33
SEC23A-213ENST00000557280 ATP7BP35670 1465 aa29.6■■■□□ 2.33
SEC23A-213ENST00000557280 ST20-MTHFSA0A0A6YYL1 179 aa29.59■■■□□ 2.33
SEC23A-213ENST00000557280 ESCO1Q5FWF5 840 aa29.58■■■□□ 2.33
SEC23A-213ENST00000557280 AHDC1Q5TGY3 1603 aaPredicted RBP29.58■■■□□ 2.33
SEC23A-213ENST00000557280 DDX17Q92841 729 aaKnown RBP29.58■■■□□ 2.33
SEC23A-213ENST00000557280 SBNO2Q9Y2G9 1366 aa29.58■■■□□ 2.33
SEC23A-213ENST00000557280 NHSL1Q5SYE7 1610 aa29.57■■■□□ 2.32
SEC23A-213ENST00000557280 PHLPP1O60346 1717 aa29.56■■■□□ 2.32
SEC23A-213ENST00000557280 TESK2Q96S53 571 aa29.55■■■□□ 2.32
SEC23A-213ENST00000557280 CABP2Q9NPB3 220 aa29.54■■■□□ 2.32
SEC23A-213ENST00000557280 TOPAZ1Q8N9V7 1692 aa29.53■■■□□ 2.32
SEC23A-213ENST00000557280 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
SEC23A-213ENST00000557280 NUDT16Q96DE0 195 aaKnown RBP29.52■■■□□ 2.32
SEC23A-213ENST00000557280 KIF1AQ12756 1690 aa29.52■■■□□ 2.32
SEC23A-213ENST00000557280 EVC2Q86UK5 1308 aa29.51■■■□□ 2.32
SEC23A-213ENST00000557280 SRPK2P78362 688 aaKnown RBP29.51■■■□□ 2.31
SEC23A-213ENST00000557280 ITSN1Q15811 1721 aa29.48■■■□□ 2.31
SEC23A-213ENST00000557280 PMFBP1Q8TBY8 1022 aa29.48■■■□□ 2.31
SEC23A-213ENST00000557280 PHF8Q9UPP1 1060 aa29.48■■■□□ 2.31
SEC23A-213ENST00000557280 FOXO3O43524 673 aa29.46■■■□□ 2.31
SEC23A-213ENST00000557280 DISP3Q9P2K9 1392 aa29.46■■■□□ 2.31
SEC23A-213ENST00000557280 PXDNQ92626 1479 aa29.46■■■□□ 2.31
SEC23A-213ENST00000557280 HSPA5P11021 654 aaKnown RBP29.45■■■□□ 2.31
SEC23A-213ENST00000557280 XPCQ01831 940 aaPredicted RBP29.45■■■□□ 2.31
SEC23A-213ENST00000557280 EIF4G2P78344 907 aaKnown RBP eCLIP29.43■■■□□ 2.3
SEC23A-213ENST00000557280 CCDC61Q9Y6R9 512 aa29.42■■■□□ 2.3
SEC23A-213ENST00000557280 PPIP5K1Q6PFW1 1433 aa29.42■■■□□ 2.3
SEC23A-213ENST00000557280 SOS2Q07890 1332 aaPredicted RBP29.42■■■□□ 2.3
SEC23A-213ENST00000557280 NPHP3Q7Z494 1330 aa29.42■■■□□ 2.3
SEC23A-213ENST00000557280 ATAD2Q6PL18 1390 aa29.37■■■□□ 2.29
SEC23A-213ENST00000557280 PLEKHG3A1L390 1219 aa29.35■■■□□ 2.29
SEC23A-213ENST00000557280 CABP1Q9NZU7 370 aa29.35■■■□□ 2.29
SEC23A-213ENST00000557280 ACEP12821 1306 aa29.35■■■□□ 2.29
SEC23A-213ENST00000557280 POLR3AO14802 1390 aaPredicted RBP29.35■■■□□ 2.29
SEC23A-213ENST00000557280 TMF1P82094 1093 aa29.34■■■□□ 2.29
SEC23A-213ENST00000557280 KRT28Q7Z3Y7 464 aa29.34■■■□□ 2.29
SEC23A-213ENST00000557280 NGDNQ8NEJ9 315 aaKnown RBP29.34■■■□□ 2.29
SEC23A-213ENST00000557280 TRPM3Q9HCF6 1732 aaPredicted RBP29.34■■■□□ 2.29
SEC23A-213ENST00000557280 JCADQ9P266 1359 aa29.32■■■□□ 2.28
SEC23A-213ENST00000557280 SHPRHQ149N8 1683 aa29.31■■■□□ 2.28
SEC23A-213ENST00000557280 PSME1Q06323 249 aa29.31■■■□□ 2.28
SEC23A-213ENST00000557280 PNPLA6Q8IY17 1366 aa29.3■■■□□ 2.28
SEC23A-213ENST00000557280 LRRC59Q96AG4 307 aaKnown RBP29.29■■■□□ 2.28
SEC23A-213ENST00000557280 SLC24A1O60721 1099 aa29.28■■■□□ 2.28
SEC23A-213ENST00000557280 PUS7Q96PZ0 661 aaKnown RBP29.28■■■□□ 2.28
SEC23A-213ENST00000557280 CD163L1Q9NR16 1453 aa29.28■■■□□ 2.28
SEC23A-213ENST00000557280 TNS3Q68CZ2 1445 aa29.27■■■□□ 2.28
SEC23A-213ENST00000557280 SBNO1A3KN83 1393 aa29.26■■■□□ 2.28
SEC23A-213ENST00000557280 SPATA31A3Q5VYP0 1347 aa29.26■■■□□ 2.27
SEC23A-213ENST00000557280 SLC12A5Q9H2X9 1139 aa29.26■■■□□ 2.27
SEC23A-213ENST00000557280 TMC1Q8TDI8 760 aa29.25■■■□□ 2.27
SEC23A-213ENST00000557280 AKAP12Q02952 1782 aa29.25■■■□□ 2.27
SEC23A-213ENST00000557280 ALS2Q96Q42 1657 aa29.25■■■□□ 2.27
SEC23A-213ENST00000557280 C11orf95C9JLR9 678 aaPredicted RBP29.24■■■□□ 2.27
SEC23A-213ENST00000557280 USP6P35125 1406 aa29.24■■■□□ 2.27
SEC23A-213ENST00000557280 CPSF1Q10570 1443 aaKnown RBP29.24■■■□□ 2.27
SEC23A-213ENST00000557280 MYOM1P52179 1685 aa29.24■■■□□ 2.27
SEC23A-213ENST00000557280 LRP6O75581 1613 aa29.23■■■□□ 2.27
SEC23A-213ENST00000557280 COL22A1Q8NFW1 1626 aaPredicted RBP29.23■■■□□ 2.27
SEC23A-213ENST00000557280 NRKQ7Z2Y5 1582 aa29.21■■■□□ 2.27
SEC23A-213ENST00000557280 MON2Q7Z3U7 1717 aa29.2■■■□□ 2.27
SEC23A-213ENST00000557280 MED1Q15648 1581 aaPredicted RBP29.19■■■□□ 2.26
SEC23A-213ENST00000557280 A0A1W2PP64 1363 aa29.19■■■□□ 2.26
SEC23A-213ENST00000557280 PAK3O75914 559 aaPredicted RBP29.19■■■□□ 2.26
SEC23A-213ENST00000557280 CDCA8Q53HL2 280 aa29.19■■■□□ 2.26
SEC23A-213ENST00000557280 SSH2Q76I76 1423 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms