RNA–Protein interactions for RNA: ENST00000557135.5

WARS-238, Transcript of tryptophanyl-tRNA synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene WARS, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WARS-238	ENST00000557135	PLEKHH1	Q9ULM0	1364 aa		13.45	□□□□□ -0.26
WARS-238	ENST00000557135	DLC1	Q96QB1	1528 aa		13.44	□□□□□ -0.26
WARS-238	ENST00000557135	TXNDC2	Q86VQ3	553 aa		13.44	□□□□□ -0.26
WARS-238	ENST00000557135	ADAMTS13	Q76LX8	1427 aa		13.43	□□□□□ -0.26
WARS-238	ENST00000557135	ABCC11	Q96J66	1382 aa		13.43	□□□□□ -0.26
WARS-238	ENST00000557135	SRPK2	P78362	688 aa	Known RBP	13.43	□□□□□ -0.26
WARS-238	ENST00000557135	PUS7	Q96PZ0	661 aa	Known RBP	13.43	□□□□□ -0.26
WARS-238	ENST00000557135	PLEKHG1	Q9ULL1	1385 aa		13.42	□□□□□ -0.26
WARS-238	ENST00000557135	NSD3	Q9BZ95	1437 aa		13.42	□□□□□ -0.26
WARS-238	ENST00000557135	ADAMTSL3	P82987	1691 aa		13.42	□□□□□ -0.26
WARS-238	ENST00000557135	ARHGAP23	Q9P227	1491 aa		13.42	□□□□□ -0.26
WARS-238	ENST00000557135	SLIT1	O75093	1534 aa		13.41	□□□□□ -0.26
WARS-238	ENST00000557135	NPC1L1	Q9UHC9	1359 aa		13.41	□□□□□ -0.26
WARS-238	ENST00000557135	PPP2R1A	P30153	589 aa		13.41	□□□□□ -0.26
WARS-238	ENST00000557135	EID1	Q9Y6B2	187 aa		13.41	□□□□□ -0.26
WARS-238	ENST00000557135	CDK19	Q9BWU1	502 aa		13.4	□□□□□ -0.26
WARS-238	ENST00000557135	SENP3-EIF4A1	A0A087X0R7	540 aa		13.4	□□□□□ -0.27
WARS-238	ENST00000557135	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.4	□□□□□ -0.27
WARS-238	ENST00000557135	SLC26A8	Q96RN1	970 aa		13.4	□□□□□ -0.27
WARS-238	ENST00000557135	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.39	□□□□□ -0.27
WARS-238	ENST00000557135	TECPR2	O15040	1411 aa		13.38	□□□□□ -0.27
WARS-238	ENST00000557135	KNDC1	Q76NI1	1749 aa		13.38	□□□□□ -0.27
WARS-238	ENST00000557135	ANKRD36B	Q8N2N9	1353 aa		13.38	□□□□□ -0.27
WARS-238	ENST00000557135	ZBED9	Q6R2W3	1325 aa		13.37	□□□□□ -0.27
WARS-238	ENST00000557135	MED14	O60244	1454 aa		13.37	□□□□□ -0.27
WARS-238	ENST00000557135	CPS1	P31327	1500 aa		13.37	□□□□□ -0.27
WARS-238	ENST00000557135	ATAD2	Q6PL18	1390 aa		13.37	□□□□□ -0.27
WARS-238	ENST00000557135	ROBO2	Q9HCK4	1378 aa		13.36	□□□□□ -0.27
WARS-238	ENST00000557135	FAM135B	Q49AJ0	1406 aa		13.36	□□□□□ -0.27
WARS-238	ENST00000557135		A0A1W2PP64	1363 aa		13.36	□□□□□ -0.27
WARS-238	ENST00000557135	PTPRU	Q92729	1446 aa		13.35	□□□□□ -0.27
WARS-238	ENST00000557135	SIRT1	Q96EB6	747 aa		13.35	□□□□□ -0.27
WARS-238	ENST00000557135	NINL	Q9Y2I6	1382 aa		13.35	□□□□□ -0.27
WARS-238	ENST00000557135	CD163L1	Q9NR16	1453 aa		13.34	□□□□□ -0.27
WARS-238	ENST00000557135	USP32	Q8NFA0	1604 aa		13.34	□□□□□ -0.27
WARS-238	ENST00000557135	WASL	O00401	505 aa	Predicted RBP	13.33	□□□□□ -0.27
WARS-238	ENST00000557135	CABP1	Q9NZU7	370 aa		13.33	□□□□□ -0.27
WARS-238	ENST00000557135	MORC1	Q86VD1	984 aa		13.33	□□□□□ -0.28
WARS-238	ENST00000557135	TBX22	Q9Y458	520 aa		13.33	□□□□□ -0.28
WARS-238	ENST00000557135	CGNL1	Q0VF96	1302 aa		13.33	□□□□□ -0.28
WARS-238	ENST00000557135	TNNT2	P45379	298 aa	Predicted RBP	13.32	□□□□□ -0.28
WARS-238	ENST00000557135	ZNF142	P52746	1687 aa	Predicted RBP	13.32	□□□□□ -0.28
WARS-238	ENST00000557135	TERF2IP	Q9NYB0	399 aa		13.32	□□□□□ -0.28
WARS-238	ENST00000557135	AMOTL2	Q9Y2J4	779 aa		13.31	□□□□□ -0.28
WARS-238	ENST00000557135	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.3	□□□□□ -0.28
WARS-238	ENST00000557135	NCKAP5L	Q9HCH0	1330 aa		13.3	□□□□□ -0.28
WARS-238	ENST00000557135	ADAMTS8	Q9UP79	889 aa		13.3	□□□□□ -0.28
WARS-238	ENST00000557135	DIP2A	Q14689	1571 aa		13.3	□□□□□ -0.28
WARS-238	ENST00000557135	BLM	P54132	1417 aa	Predicted RBP	13.29	□□□□□ -0.28
WARS-238	ENST00000557135	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.29	□□□□□ -0.28
WARS-238	ENST00000557135	ANKLE2	Q86XL3	938 aa		13.28	□□□□□ -0.28
WARS-238	ENST00000557135	NUDT16	Q96DE0	195 aa	Known RBP	13.28	□□□□□ -0.28
WARS-238	ENST00000557135	PPIP5K1	Q6PFW1	1433 aa		13.28	□□□□□ -0.28
WARS-238	ENST00000557135	NSD2	O96028	1365 aa		13.28	□□□□□ -0.28
WARS-238	ENST00000557135	WDR43	Q15061	677 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
WARS-238	ENST00000557135	GGNBP2	Q9H3C7	697 aa		13.28	□□□□□ -0.28
WARS-238	ENST00000557135	SALL2	Q9Y467	1007 aa	Predicted RBP	13.28	□□□□□ -0.28
WARS-238	ENST00000557135	PRR36	Q9H6K5	1346 aa		13.27	□□□□□ -0.28
WARS-238	ENST00000557135	ATP7B	P35670	1465 aa		13.27	□□□□□ -0.29
WARS-238	ENST00000557135	SETD1B	Q9UPS6	1966 aa	Known RBP	13.26	□□□□□ -0.29
WARS-238	ENST00000557135	INSR	P06213	1382 aa		13.26	□□□□□ -0.29
WARS-238	ENST00000557135	ADGRB2	O60241	1585 aa		13.26	□□□□□ -0.29
WARS-238	ENST00000557135	PTCH1	Q13635	1447 aa		13.26	□□□□□ -0.29
WARS-238	ENST00000557135	FYB1	O15117	783 aa		13.26	□□□□□ -0.29
WARS-238	ENST00000557135	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.26	□□□□□ -0.29
WARS-238	ENST00000557135	NUTM2F	A1L443	756 aa		13.25	□□□□□ -0.29
WARS-238	ENST00000557135	XRN1	Q8IZH2	1706 aa	Known RBP	13.25	□□□□□ -0.29
WARS-238	ENST00000557135	KCNA6	P17658	529 aa		13.25	□□□□□ -0.29
WARS-238	ENST00000557135	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
WARS-238	ENST00000557135	CCDC61	Q9Y6R9	512 aa		13.25	□□□□□ -0.29
WARS-238	ENST00000557135	POLR3A	O14802	1390 aa	Predicted RBP	13.25	□□□□□ -0.29
WARS-238	ENST00000557135	MTHFS	P49914	203 aa		13.24	□□□□□ -0.29
WARS-238	ENST00000557135	CPSF1	Q10570	1443 aa	Known RBP	13.24	□□□□□ -0.29
WARS-238	ENST00000557135	SMG6	Q86US8	1419 aa	Known RBP	13.24	□□□□□ -0.29
WARS-238	ENST00000557135	FKBP8	Q14318	412 aa		13.24	□□□□□ -0.29
WARS-238	ENST00000557135	CDC42BPG	Q6DT37	1551 aa		13.23	□□□□□ -0.29
WARS-238	ENST00000557135	PIK3R4	Q99570	1358 aa		13.22	□□□□□ -0.29
WARS-238	ENST00000557135	CCDC146	Q8IYE0	955 aa		13.22	□□□□□ -0.29
WARS-238	ENST00000557135	KIF20B	Q96Q89	1820 aa		13.22	□□□□□ -0.29
WARS-238	ENST00000557135	ANKRD26	Q9UPS8	1709 aa		13.22	□□□□□ -0.29
WARS-238	ENST00000557135	NUDC	Q9Y266	331 aa		13.22	□□□□□ -0.29
WARS-238	ENST00000557135	NEFL	P07196	543 aa		13.21	□□□□□ -0.29
WARS-238	ENST00000557135	SHPRH	Q149N8	1683 aa		13.21	□□□□□ -0.29
WARS-238	ENST00000557135	NPHP4	O75161	1426 aa	Predicted RBP	13.21	□□□□□ -0.3
WARS-238	ENST00000557135	EDC4	Q6P2E9	1401 aa	Known RBP	13.21	□□□□□ -0.3
WARS-238	ENST00000557135	TOPAZ1	Q8N9V7	1692 aa		13.2	□□□□□ -0.3
WARS-238	ENST00000557135	NME9	Q86XW9	330 aa		13.2	□□□□□ -0.3
WARS-238	ENST00000557135	NKTR	P30414	1462 aa	Known RBP	13.19	□□□□□ -0.3
WARS-238	ENST00000557135	MON2	Q7Z3U7	1717 aa		13.19	□□□□□ -0.3
WARS-238	ENST00000557135	ZRANB1	Q9UGI0	708 aa		13.19	□□□□□ -0.3
WARS-238	ENST00000557135	ITSN1	Q15811	1721 aa		13.19	□□□□□ -0.3
WARS-238	ENST00000557135	AKAP12	Q02952	1782 aa		13.19	□□□□□ -0.3
WARS-238	ENST00000557135	CFAP53	Q96M91	514 aa		13.19	□□□□□ -0.3
WARS-238	ENST00000557135	CHD2	O14647	1828 aa	Known RBP	13.18	□□□□□ -0.3
WARS-238	ENST00000557135	FBLN1	P23142	703 aa		13.18	□□□□□ -0.3
WARS-238	ENST00000557135	IRX6	P78412	446 aa	Predicted RBP	13.18	□□□□□ -0.3
WARS-238	ENST00000557135	RBM33	Q96EV2	1170 aa	Known RBP	13.18	□□□□□ -0.3
WARS-238	ENST00000557135	CDCA7L	Q96GN5	454 aa		13.18	□□□□□ -0.3
WARS-238	ENST00000557135	ACE	P12821	1306 aa		13.18	□□□□□ -0.3
WARS-238	ENST00000557135	PLEKHG3	A1L390	1219 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms