RNA–Protein interactions for RNA: ENST00000557065.1

COCH-211, Transcript of cochlin, humanhuman

TSL 5

Gene COCH, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-211ENST00000557065 PNPLA6Q8IY17 1366 aa12.1□□□□□ -0.47
COCH-211ENST00000557065 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
COCH-211ENST00000557065 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
COCH-211ENST00000557065 WAPLQ7Z5K2 1190 aa12.09□□□□□ -0.47
COCH-211ENST00000557065 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
COCH-211ENST00000557065 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
COCH-211ENST00000557065 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
COCH-211ENST00000557065 FOXO3O43524 673 aa12.07□□□□□ -0.48
COCH-211ENST00000557065 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
COCH-211ENST00000557065 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
COCH-211ENST00000557065 ABCC11Q96J66 1382 aa12.06□□□□□ -0.48
COCH-211ENST00000557065 SPATA31E1Q6ZUB1 1445 aa12.06□□□□□ -0.48
COCH-211ENST00000557065 KCNA4P22459 653 aa12.06□□□□□ -0.48
COCH-211ENST00000557065 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
COCH-211ENST00000557065 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
COCH-211ENST00000557065 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
COCH-211ENST00000557065 USP21Q9UK80 565 aa12.05□□□□□ -0.48
COCH-211ENST00000557065 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
COCH-211ENST00000557065 XPCQ01831 940 aaPredicted RBP12.04□□□□□ -0.48
COCH-211ENST00000557065 FNBP4Q8N3X1 1017 aaPredicted RBP12.04□□□□□ -0.48
COCH-211ENST00000557065 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
COCH-211ENST00000557065 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
COCH-211ENST00000557065 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
COCH-211ENST00000557065 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
COCH-211ENST00000557065 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
COCH-211ENST00000557065 TECPR2O15040 1411 aa12.02□□□□□ -0.49
COCH-211ENST00000557065 PPLO60437 1756 aa12.01□□□□□ -0.49
COCH-211ENST00000557065 PSME1Q06323 249 aa12.01□□□□□ -0.49
COCH-211ENST00000557065 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
COCH-211ENST00000557065 PLEKHH1Q9ULM0 1364 aa12.01□□□□□ -0.49
COCH-211ENST00000557065 YTHDC2Q9H6S0 1430 aaKnown RBP12.01□□□□□ -0.49
COCH-211ENST00000557065 POGKQ9P215 609 aa12□□□□□ -0.49
COCH-211ENST00000557065 PIK3C2GO75747 1445 aa12□□□□□ -0.49
COCH-211ENST00000557065 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
COCH-211ENST00000557065 PRAM1Q96QH2 718 aa11.99□□□□□ -0.49
COCH-211ENST00000557065 LAMC1P11047 1609 aa11.98□□□□□ -0.49
COCH-211ENST00000557065 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
COCH-211ENST00000557065 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
COCH-211ENST00000557065 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
COCH-211ENST00000557065 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
COCH-211ENST00000557065 CDC42BPGQ6DT37 1551 aa11.97□□□□□ -0.49
COCH-211ENST00000557065 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
COCH-211ENST00000557065 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
COCH-211ENST00000557065 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
COCH-211ENST00000557065 PXDNQ92626 1479 aa11.96□□□□□ -0.49
COCH-211ENST00000557065 RGS12O14924 1447 aa11.96□□□□□ -0.49
COCH-211ENST00000557065 HRCP23327 699 aa11.96□□□□□ -0.49
COCH-211ENST00000557065 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
COCH-211ENST00000557065 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
COCH-211ENST00000557065 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
COCH-211ENST00000557065 GJD4Q96KN9 370 aaPredicted RBP11.96□□□□□ -0.49
COCH-211ENST00000557065 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
COCH-211ENST00000557065 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
COCH-211ENST00000557065 MYOM2P54296 1465 aa11.95□□□□□ -0.5
COCH-211ENST00000557065 ATRNO75882 1429 aa11.94□□□□□ -0.5
COCH-211ENST00000557065 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
COCH-211ENST00000557065 BCL9LQ86UU0 1499 aa11.94□□□□□ -0.5
COCH-211ENST00000557065 NRXN1Q9ULB1 1477 aa11.94□□□□□ -0.5
COCH-211ENST00000557065 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
COCH-211ENST00000557065 CCDC125Q86Z20 511 aa11.93□□□□□ -0.5
COCH-211ENST00000557065 PMFBP1Q8TBY8 1022 aa11.93□□□□□ -0.5
COCH-211ENST00000557065 CABLES1Q8TDN4 633 aa11.92□□□□□ -0.5
COCH-211ENST00000557065 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
COCH-211ENST00000557065 COL22A1Q8NFW1 1626 aaPredicted RBP11.91□□□□□ -0.5
COCH-211ENST00000557065 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
COCH-211ENST00000557065 MINK1Q8N4C8 1332 aaPredicted RBP11.9□□□□□ -0.5
COCH-211ENST00000557065 ARHGEF10O15013 1369 aa11.9□□□□□ -0.5
COCH-211ENST00000557065 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
COCH-211ENST00000557065 WASLO00401 505 aaPredicted RBP11.89□□□□□ -0.51
COCH-211ENST00000557065 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
COCH-211ENST00000557065 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
COCH-211ENST00000557065 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
COCH-211ENST00000557065 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
COCH-211ENST00000557065 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
COCH-211ENST00000557065 VPS72Q15906 364 aa11.88□□□□□ -0.51
COCH-211ENST00000557065 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
COCH-211ENST00000557065 EIF3AQ14152 1382 aaKnown RBP11.88□□□□□ -0.51
COCH-211ENST00000557065 KNDC1Q76NI1 1749 aa11.88□□□□□ -0.51
COCH-211ENST00000557065 ANKARQ7Z5J8 1434 aa11.87□□□□□ -0.51
COCH-211ENST00000557065 SLIT2O94813 1529 aa11.87□□□□□ -0.51
COCH-211ENST00000557065 SEPT12Q8IYM1 358 aa11.87□□□□□ -0.51
COCH-211ENST00000557065 DLC1Q96QB1 1528 aa11.86□□□□□ -0.51
COCH-211ENST00000557065 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
COCH-211ENST00000557065 ONECUT3O60422 494 aaPredicted RBP11.86□□□□□ -0.51
COCH-211ENST00000557065 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
COCH-211ENST00000557065 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
COCH-211ENST00000557065 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
COCH-211ENST00000557065 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
COCH-211ENST00000557065 NUDT16Q96DE0 195 aaKnown RBP11.85□□□□□ -0.51
COCH-211ENST00000557065 PRR36Q9H6K5 1346 aa11.85□□□□□ -0.51
COCH-211ENST00000557065 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
COCH-211ENST00000557065 BTG4Q9NY30 223 aa11.84□□□□□ -0.51
COCH-211ENST00000557065 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
COCH-211ENST00000557065 A0A0G2JS52 829 aa11.83□□□□□ -0.52
COCH-211ENST00000557065 MYT1Q01538 1121 aa11.83□□□□□ -0.52
COCH-211ENST00000557065 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
COCH-211ENST00000557065 CDK19Q9BWU1 502 aa11.83□□□□□ -0.52
COCH-211ENST00000557065 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
COCH-211ENST00000557065 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
COCH-211ENST00000557065 BLMP54132 1417 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms