RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 CTC1Q2NKJ3 1217 aa9.12□□□□□ -0.95
LINC00871-203ENST00000556869 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
LINC00871-203ENST00000556869 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
LINC00871-203ENST00000556869 TRIM32Q13049 653 aa9.1□□□□□ -0.95
LINC00871-203ENST00000556869 Q3C1V9 767 aa9.1□□□□□ -0.95
LINC00871-203ENST00000556869 WNT7AO00755 349 aa9.09□□□□□ -0.95
LINC00871-203ENST00000556869 CD46P15529 392 aa9.09□□□□□ -0.95
LINC00871-203ENST00000556869 SMPD1P17405 629 aa9.09□□□□□ -0.95
LINC00871-203ENST00000556869 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
LINC00871-203ENST00000556869 MMP16P51512 607 aa9.08□□□□□ -0.96
LINC00871-203ENST00000556869 WFS1O76024 890 aa9.07□□□□□ -0.96
LINC00871-203ENST00000556869 SNIP1Q8TAD8 396 aaKnown RBP9.07□□□□□ -0.96
LINC00871-203ENST00000556869 HLA-CQ95604 372 aa9.07□□□□□ -0.96
LINC00871-203ENST00000556869 MRGPRX2Q96LB1 330 aa9.07□□□□□ -0.96
LINC00871-203ENST00000556869 J3QL48 77 aa9.06□□□□□ -0.96
LINC00871-203ENST00000556869 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
LINC00871-203ENST00000556869 KDM4AO75164 1064 aa9.05□□□□□ -0.96
LINC00871-203ENST00000556869 CCDC24Q8N4L8 307 aa9.05□□□□□ -0.96
LINC00871-203ENST00000556869 DXOO77932 396 aaKnown RBP9.04□□□□□ -0.96
LINC00871-203ENST00000556869 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
LINC00871-203ENST00000556869 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
LINC00871-203ENST00000556869 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
LINC00871-203ENST00000556869 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
LINC00871-203ENST00000556869 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
LINC00871-203ENST00000556869 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
LINC00871-203ENST00000556869 HPS1Q92902 700 aa9.01□□□□□ -0.97
LINC00871-203ENST00000556869 HOXA2O43364 376 aa9□□□□□ -0.97
LINC00871-203ENST00000556869 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
LINC00871-203ENST00000556869 SKOR1P84550 965 aa9□□□□□ -0.97
LINC00871-203ENST00000556869 RC3H1Q5TC82 1133 aaKnown RBP9□□□□□ -0.97
LINC00871-203ENST00000556869 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
LINC00871-203ENST00000556869 IRF6O14896 467 aa8.99□□□□□ -0.97
LINC00871-203ENST00000556869 USP46P62068 366 aa8.99□□□□□ -0.97
LINC00871-203ENST00000556869 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
LINC00871-203ENST00000556869 TRIM47Q96LD4 638 aa8.98□□□□□ -0.97
LINC00871-203ENST00000556869 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
LINC00871-203ENST00000556869 SENP2Q9HC62 589 aa8.97□□□□□ -0.97
LINC00871-203ENST00000556869 WNT7BP56706 349 aa8.96□□□□□ -0.98
LINC00871-203ENST00000556869 CCDC102AQ96A19 550 aa8.96□□□□□ -0.98
LINC00871-203ENST00000556869 TERTO14746 1132 aaKnown RBP8.95□□□□□ -0.98
LINC00871-203ENST00000556869 WIPF1O43516 503 aa8.95□□□□□ -0.98
LINC00871-203ENST00000556869 ALDH1A1P00352 501 aa8.95□□□□□ -0.98
LINC00871-203ENST00000556869 JUNDP17535 347 aa8.95□□□□□ -0.98
LINC00871-203ENST00000556869 KDM2AQ9Y2K7 1162 aa8.95□□□□□ -0.98
LINC00871-203ENST00000556869 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
LINC00871-203ENST00000556869 STK17AQ9UEE5 414 aa8.93□□□□□ -0.98
LINC00871-203ENST00000556869 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
LINC00871-203ENST00000556869 INSM1Q01101 510 aaPredicted RBP8.92□□□□□ -0.98
LINC00871-203ENST00000556869 KIFC2Q96AC6 838 aa8.92□□□□□ -0.98
LINC00871-203ENST00000556869 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
LINC00871-203ENST00000556869 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
LINC00871-203ENST00000556869 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
LINC00871-203ENST00000556869 CLCN1P35523 988 aa8.91□□□□□ -0.98
LINC00871-203ENST00000556869 PTCRAQ6ISU1 281 aaPredicted RBP8.91□□□□□ -0.98
LINC00871-203ENST00000556869 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
LINC00871-203ENST00000556869 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
LINC00871-203ENST00000556869 BMP1P13497 986 aa8.9□□□□□ -0.98
LINC00871-203ENST00000556869 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
LINC00871-203ENST00000556869 C6orf229H3BNL8 230 aa8.88□□□□□ -0.99
LINC00871-203ENST00000556869 KRI1Q8N9T8 703 aaKnown RBP8.88□□□□□ -0.99
LINC00871-203ENST00000556869 PCDHGC3Q9UN70 934 aa8.88□□□□□ -0.99
LINC00871-203ENST00000556869 WASF2Q9Y6W5 498 aa8.88□□□□□ -0.99
LINC00871-203ENST00000556869 SIAH2O43255 324 aa8.87□□□□□ -0.99
LINC00871-203ENST00000556869 FDX1P10109 184 aa8.87□□□□□ -0.99
LINC00871-203ENST00000556869 CAPN5O15484 640 aaPredicted RBP8.86□□□□□ -0.99
LINC00871-203ENST00000556869 TRIM46Q7Z4K8 759 aa8.86□□□□□ -0.99
LINC00871-203ENST00000556869 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
LINC00871-203ENST00000556869 MS4A1P11836 297 aa8.85□□□□□ -0.99
LINC00871-203ENST00000556869 SH3BP2P78314 561 aa8.85□□□□□ -0.99
LINC00871-203ENST00000556869 LINC01559Q495D7 138 aa8.85□□□□□ -0.99
LINC00871-203ENST00000556869 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
LINC00871-203ENST00000556869 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
LINC00871-203ENST00000556869 TLL2Q9Y6L7 1015 aa8.83□□□□□ -1
LINC00871-203ENST00000556869 NDUFV2P19404 249 aa8.82□□□□□ -1
LINC00871-203ENST00000556869 UNC93B1Q9H1C4 597 aa8.82□□□□□ -1
LINC00871-203ENST00000556869 VEGFBP49765 207 aa8.81□□□□□ -1
LINC00871-203ENST00000556869 PTPRNQ16849 979 aa8.81□□□□□ -1
LINC00871-203ENST00000556869 SPIRE2Q8WWL2 714 aa8.81□□□□□ -1
LINC00871-203ENST00000556869 BAP1Q92560 729 aa8.81□□□□□ -1
LINC00871-203ENST00000556869 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
LINC00871-203ENST00000556869 GMPRP36959 345 aa8.8□□□□□ -1
LINC00871-203ENST00000556869 MOXD2PA6NHM9 499 aa8.79□□□□□ -1
LINC00871-203ENST00000556869 PRR7Q8TB68 274 aa8.79□□□□□ -1
LINC00871-203ENST00000556869 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
LINC00871-203ENST00000556869 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
LINC00871-203ENST00000556869 ZFP42Q96MM3 310 aa8.78□□□□□ -1
LINC00871-203ENST00000556869 KCNH2Q12809 1159 aa8.77□□□□□ -1.01
LINC00871-203ENST00000556869 ZNF511Q8NB15 262 aa8.77□□□□□ -1.01
LINC00871-203ENST00000556869 IRF7Q92985 503 aa8.77□□□□□ -1.01
LINC00871-203ENST00000556869 NNTQ13423 1086 aa8.76□□□□□ -1.01
LINC00871-203ENST00000556869 H3BM21 787 aa8.75□□□□□ -1.01
LINC00871-203ENST00000556869 VARSP26640 1264 aaKnown RBP8.75□□□□□ -1.01
LINC00871-203ENST00000556869 MTMR2Q13614 643 aa8.75□□□□□ -1.01
LINC00871-203ENST00000556869 ERBB4Q15303 1308 aa8.75□□□□□ -1.01
LINC00871-203ENST00000556869 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
LINC00871-203ENST00000556869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
LINC00871-203ENST00000556869 NPAS3Q8IXF0 933 aa8.74□□□□□ -1.01
LINC00871-203ENST00000556869 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
LINC00871-203ENST00000556869 ZSCAN1Q8NBB4 408 aa8.74□□□□□ -1.01
LINC00871-203ENST00000556869 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms