RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 MRC2Q9UBG0 1479 aa9.92□□□□□ -0.82
TMEM260-212ENST00000556810 FMNL1O95466 1100 aaPredicted RBP9.92□□□□□ -0.82
TMEM260-212ENST00000556810 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
TMEM260-212ENST00000556810 PDZRN3Q9UPQ7 1066 aa9.91□□□□□ -0.82
TMEM260-212ENST00000556810 CLCN1P35523 988 aa9.9□□□□□ -0.82
TMEM260-212ENST00000556810 SPRYD7Q5W111 196 aa9.9□□□□□ -0.82
TMEM260-212ENST00000556810 LIAT1Q6ZQX7 453 aa9.9□□□□□ -0.82
TMEM260-212ENST00000556810 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
TMEM260-212ENST00000556810 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
TMEM260-212ENST00000556810 WDR62O43379 1518 aa9.9□□□□□ -0.82
TMEM260-212ENST00000556810 KDM4AO75164 1064 aa9.88□□□□□ -0.83
TMEM260-212ENST00000556810 PLA2G2CQ5R387 149 aa9.88□□□□□ -0.83
TMEM260-212ENST00000556810 BRICD5Q6PL45 260 aa9.88□□□□□ -0.83
TMEM260-212ENST00000556810 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
TMEM260-212ENST00000556810 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
TMEM260-212ENST00000556810 RNF19BQ6ZMZ0 732 aa9.87□□□□□ -0.83
TMEM260-212ENST00000556810 BARGINQ6ZT62 677 aa9.87□□□□□ -0.83
TMEM260-212ENST00000556810 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
TMEM260-212ENST00000556810 FAM217BQ9NTX9 383 aaPredicted RBP9.87□□□□□ -0.83
TMEM260-212ENST00000556810 ZMYND10O75800 440 aa9.86□□□□□ -0.83
TMEM260-212ENST00000556810 USP46P62068 366 aa9.86□□□□□ -0.83
TMEM260-212ENST00000556810 ZC3H15Q8WU90 426 aaKnown RBP9.86□□□□□ -0.83
TMEM260-212ENST00000556810 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 Q3C1V9 767 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 TRAF7Q6Q0C0 670 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 TRIM67Q6ZTA4 783 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
TMEM260-212ENST00000556810 CCDC88BA6NC98 1476 aa9.85□□□□□ -0.83
TMEM260-212ENST00000556810 LCE2BO14633 110 aa9.84□□□□□ -0.83
TMEM260-212ENST00000556810 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
TMEM260-212ENST00000556810 HOXA2O43364 376 aa9.82□□□□□ -0.84
TMEM260-212ENST00000556810 HLA-CQ95604 372 aa9.82□□□□□ -0.84
TMEM260-212ENST00000556810 REPIN1Q9BWE0 567 aaKnown RBP9.82□□□□□ -0.84
TMEM260-212ENST00000556810 RPIAP49247 311 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 PRR20EP86478 221 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 PRR20CP86479 221 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 PRR20DP86480 221 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 PRR20BP86481 221 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 PRR20AP86496 221 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 BCANQ96GW7 911 aa9.81□□□□□ -0.84
TMEM260-212ENST00000556810 CFTRP13569 1480 aa9.79□□□□□ -0.84
TMEM260-212ENST00000556810 GDF9O60383 454 aa9.79□□□□□ -0.84
TMEM260-212ENST00000556810 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
TMEM260-212ENST00000556810 AMHR2Q16671 573 aa9.79□□□□□ -0.84
TMEM260-212ENST00000556810 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
TMEM260-212ENST00000556810 USB1Q9BQ65 265 aaKnown RBP9.79□□□□□ -0.84
TMEM260-212ENST00000556810 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
TMEM260-212ENST00000556810 SSTR3P32745 418 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-212ENST00000556810 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
TMEM260-212ENST00000556810 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.84
TMEM260-212ENST00000556810 MMP16P51512 607 aa9.77□□□□□ -0.85
TMEM260-212ENST00000556810 CD2BP2O95400 341 aaKnown RBP9.76□□□□□ -0.85
TMEM260-212ENST00000556810 PKDCCQ504Y2 493 aa9.75□□□□□ -0.85
TMEM260-212ENST00000556810 ZBTB24O43167 697 aaPredicted RBP9.74□□□□□ -0.85
TMEM260-212ENST00000556810 DXOO77932 396 aaKnown RBP9.74□□□□□ -0.85
TMEM260-212ENST00000556810 FOXC1Q12948 553 aa9.74□□□□□ -0.85
TMEM260-212ENST00000556810 GIGYF2Q6Y7W6 1299 aaKnown RBP9.74□□□□□ -0.85
TMEM260-212ENST00000556810 PKD2L1Q9P0L9 805 aa9.74□□□□□ -0.85
TMEM260-212ENST00000556810 DGAT1O75907 488 aa9.73□□□□□ -0.85
TMEM260-212ENST00000556810 RIMBP3CA6NJZ7 1639 aa9.72□□□□□ -0.85
TMEM260-212ENST00000556810 RIMBP3BA6NNM3 1639 aa9.72□□□□□ -0.85
TMEM260-212ENST00000556810 RIMBP3Q9UFD9 1639 aa9.72□□□□□ -0.85
TMEM260-212ENST00000556810 FAM187AA6NFU0 413 aa9.72□□□□□ -0.85
TMEM260-212ENST00000556810 FDX1P10109 184 aa9.72□□□□□ -0.85
TMEM260-212ENST00000556810 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
TMEM260-212ENST00000556810 SYMPKQ92797 1274 aaKnown RBP9.72□□□□□ -0.85
TMEM260-212ENST00000556810 TRIM66O15016 1216 aa9.71□□□□□ -0.86
TMEM260-212ENST00000556810 AK7Q96M32 723 aa9.71□□□□□ -0.86
TMEM260-212ENST00000556810 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
TMEM260-212ENST00000556810 PARP9Q8IXQ6 854 aa9.7□□□□□ -0.86
TMEM260-212ENST00000556810 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
TMEM260-212ENST00000556810 JUNDP17535 347 aa9.69□□□□□ -0.86
TMEM260-212ENST00000556810 MYT1Q01538 1121 aa9.69□□□□□ -0.86
TMEM260-212ENST00000556810 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
TMEM260-212ENST00000556810 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
TMEM260-212ENST00000556810 ZNF608Q9ULD9 1512 aaPredicted RBP9.69□□□□□ -0.86
TMEM260-212ENST00000556810 MOXD2PA6NHM9 499 aa9.68□□□□□ -0.86
TMEM260-212ENST00000556810 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-212ENST00000556810 NDUFV2P19404 249 aa9.68□□□□□ -0.86
TMEM260-212ENST00000556810 TRIM32Q13049 653 aa9.68□□□□□ -0.86
TMEM260-212ENST00000556810 CCDC24Q8N4L8 307 aa9.68□□□□□ -0.86
TMEM260-212ENST00000556810 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
TMEM260-212ENST00000556810 CYB5RLQ6IPT4 315 aa9.67□□□□□ -0.86
TMEM260-212ENST00000556810 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
TMEM260-212ENST00000556810 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
TMEM260-212ENST00000556810 TOR4AQ9NXH8 423 aa9.66□□□□□ -0.86
TMEM260-212ENST00000556810 ARHGEF11O15085 1522 aa9.66□□□□□ -0.86
TMEM260-212ENST00000556810 MS4A1P11836 297 aa9.65□□□□□ -0.86
TMEM260-212ENST00000556810 WNT7AO00755 349 aa9.64□□□□□ -0.87
TMEM260-212ENST00000556810 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
TMEM260-212ENST00000556810 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
TMEM260-212ENST00000556810 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
TMEM260-212ENST00000556810 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
TMEM260-212ENST00000556810 EEA1Q15075 1411 aa9.64□□□□□ -0.87
TMEM260-212ENST00000556810 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
TMEM260-212ENST00000556810 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
TMEM260-212ENST00000556810 PDE4DQ08499 809 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms