RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 MTERF4Q7Z6M4 381 aaKnown RBP9.84□□□□□ -0.83
NUMB-223ENST00000556772 NGDNQ8NEJ9 315 aaKnown RBP9.84□□□□□ -0.83
NUMB-223ENST00000556772 RBM10P98175 930 aaKnown RBP9.84□□□□□ -0.83
NUMB-223ENST00000556772 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
NUMB-223ENST00000556772 ZKSCAN1P17029 563 aaPredicted RBP9.84□□□□□ -0.83
NUMB-223ENST00000556772 GORABQ5T7V8 394 aa9.84□□□□□ -0.83
NUMB-223ENST00000556772 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
NUMB-223ENST00000556772 SMC3Q9UQE7 1217 aa9.84□□□□□ -0.83
NUMB-223ENST00000556772 ERBINQ96RT1 1412 aa9.84□□□□□ -0.83
NUMB-223ENST00000556772 RABEP1Q15276 862 aa9.84□□□□□ -0.83
NUMB-223ENST00000556772 NOB1Q9ULX3 412 aaKnown RBP9.84□□□□□ -0.83
NUMB-223ENST00000556772 VPS37CA5D8V6 355 aaPredicted RBP9.83□□□□□ -0.84
NUMB-223ENST00000556772 MVPQ14764 893 aaKnown RBP9.83□□□□□ -0.84
NUMB-223ENST00000556772 MBD3O95983 291 aa9.83□□□□□ -0.84
NUMB-223ENST00000556772 TMEM132EQ6IEE7 984 aa9.83□□□□□ -0.84
NUMB-223ENST00000556772 C1orf115Q9H7X2 142 aa9.83□□□□□ -0.84
NUMB-223ENST00000556772 CABP2Q9NPB3 220 aa9.83□□□□□ -0.84
NUMB-223ENST00000556772 WDR63Q8IWG1 891 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.82□□□□□ -0.84
NUMB-223ENST00000556772 GCC1Q96CN9 775 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 K7ELQ4 463 aaPredicted RBP9.82□□□□□ -0.84
NUMB-223ENST00000556772 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 MAPKBP1O60336 1514 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 NEK4P51957 841 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
NUMB-223ENST00000556772 BICD2Q8TD16 824 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 CCDC34Q96HJ3 373 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 GOLGA6L1Q8N7Z2 621 aa9.82□□□□□ -0.84
NUMB-223ENST00000556772 ATF7IPQ6VMQ6 1270 aa9.81□□□□□ -0.84
NUMB-223ENST00000556772 PCF11O94913 1555 aaKnown RBP9.81□□□□□ -0.84
NUMB-223ENST00000556772 SUPT6HQ7KZ85 1726 aaKnown RBP9.81□□□□□ -0.84
NUMB-223ENST00000556772 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
NUMB-223ENST00000556772 RRP9O43818 475 aaKnown RBP9.81□□□□□ -0.84
NUMB-223ENST00000556772 MEX3CQ5U5Q3 659 aaKnown RBP9.81□□□□□ -0.84
NUMB-223ENST00000556772 SLC12A5Q9H2X9 1139 aa9.81□□□□□ -0.84
NUMB-223ENST00000556772 CIZ1Q9ULV3 898 aaPredicted RBP9.81□□□□□ -0.84
NUMB-223ENST00000556772 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
NUMB-223ENST00000556772 ZNF330Q9Y3S2 320 aaPredicted RBP9.81□□□□□ -0.84
NUMB-223ENST00000556772 HMGXB3Q12766 1538 aa9.8□□□□□ -0.84
NUMB-223ENST00000556772 TSPY26PQ9H489 355 aa9.8□□□□□ -0.84
NUMB-223ENST00000556772 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
NUMB-223ENST00000556772 EIF2S2P20042 333 aaKnown RBP9.8□□□□□ -0.84
NUMB-223ENST00000556772 CCAR2Q8N163 923 aaKnown RBP9.8□□□□□ -0.84
NUMB-223ENST00000556772 CT47B1P0C2W7 299 aaPredicted RBP9.79□□□□□ -0.84
NUMB-223ENST00000556772 SASS6Q6UVJ0 657 aa9.79□□□□□ -0.84
NUMB-223ENST00000556772 CHD1LQ86WJ1 897 aa9.79□□□□□ -0.84
NUMB-223ENST00000556772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.79□□□□□ -0.84
NUMB-223ENST00000556772 IFIT2P09913 472 aaKnown RBP9.79□□□□□ -0.84
NUMB-223ENST00000556772 PRKAR2BP31323 418 aa9.79□□□□□ -0.84
NUMB-223ENST00000556772 CREBRFQ8IUR6 639 aa9.79□□□□□ -0.84
NUMB-223ENST00000556772 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
NUMB-223ENST00000556772 C9orf78Q9NZ63 289 aaPredicted RBP9.79□□□□□ -0.84
NUMB-223ENST00000556772 CSB-PGBD3P0DP91 1061 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 MCM2P49736 904 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 TSPYL4Q9UJ04 414 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 TAF7LQ5H9L4 462 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 TROQ12816 1431 aaPredicted RBP9.78□□□□□ -0.84
NUMB-223ENST00000556772 HMGN5P82970 282 aaKnown RBP9.78□□□□□ -0.84
NUMB-223ENST00000556772 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 DUSP27Q5VZP5 1158 aa9.78□□□□□ -0.84
NUMB-223ENST00000556772 TWISTNBQ3B726 338 aaPredicted RBP9.77□□□□□ -0.84
NUMB-223ENST00000556772 TPM3P06753 285 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 HOMER1Q86YM7 354 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 CHMP4CQ96CF2 233 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.77□□□□□ -0.85
NUMB-223ENST00000556772 SNAPC4Q5SXM2 1469 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 CCDC27Q2M243 656 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 LAMC3Q9Y6N6 1575 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 NPHP1O15259 732 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 AFAP1Q8N556 730 aa9.77□□□□□ -0.85
NUMB-223ENST00000556772 HECW1Q76N89 1606 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 LETM1O95202 739 aaPredicted RBP9.76□□□□□ -0.85
NUMB-223ENST00000556772 ZSCAN30Q86W11 494 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 MPNDQ8N594 471 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
NUMB-223ENST00000556772 RPRD2Q5VT52 1461 aaKnown RBP9.76□□□□□ -0.85
NUMB-223ENST00000556772 TOPBP1Q92547 1522 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 TEFQ10587 303 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 PLEKHH2Q8IVE3 1493 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 RAPGEF3O95398 923 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 RARSP54136 660 aaKnown RBP9.76□□□□□ -0.85
NUMB-223ENST00000556772 UQCRHLA0A096LP55 91 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 UQCRHP07919 91 aa9.76□□□□□ -0.85
NUMB-223ENST00000556772 PTPN23Q9H3S7 1636 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 EPRSP07814 1512 aaKnown RBP9.75□□□□□ -0.85
NUMB-223ENST00000556772 POLA1P09884 1462 aaPredicted RBP9.75□□□□□ -0.85
NUMB-223ENST00000556772 NKTRP30414 1462 aaKnown RBP9.75□□□□□ -0.85
NUMB-223ENST00000556772 HSP90AB4PQ58FF6 505 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 CDK13Q14004 1512 aaKnown RBP9.75□□□□□ -0.85
NUMB-223ENST00000556772 LRPPRCP42704 1394 aaKnown RBP9.75□□□□□ -0.85
NUMB-223ENST00000556772 ERC2O15083 957 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 FIBPO43427 364 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 TMEM57Q8N5G2 664 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 TOMM22Q9NS69 142 aa9.75□□□□□ -0.85
NUMB-223ENST00000556772 UBTFL1P0CB47 393 aaPredicted RBP9.74□□□□□ -0.85
NUMB-223ENST00000556772 GPS2Q13227 327 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms