RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
GPHN-214ENST00000556633 PUS10Q3MIT2 529 aaKnown RBP7.4□□□□□ -1.22
GPHN-214ENST00000556633 TSR3Q9UJK0 312 aaKnown RBP7.4□□□□□ -1.22
GPHN-214ENST00000556633 A6NJR5 290 aa7.39□□□□□ -1.23
GPHN-214ENST00000556633 RAD21O60216 631 aa7.39□□□□□ -1.23
GPHN-214ENST00000556633 USP17L8P0C7I0 530 aa7.39□□□□□ -1.23
GPHN-214ENST00000556633 MORN1Q5T089 497 aa7.39□□□□□ -1.23
GPHN-214ENST00000556633 APLP1P51693 650 aa7.38□□□□□ -1.23
GPHN-214ENST00000556633 MTMR14Q8NCE2 650 aa7.38□□□□□ -1.23
GPHN-214ENST00000556633 TSC1Q92574 1164 aa7.38□□□□□ -1.23
GPHN-214ENST00000556633 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
GPHN-214ENST00000556633 POM121Q96HA1 1249 aa7.38□□□□□ -1.23
GPHN-214ENST00000556633 HELBQ8NG08 1087 aaPredicted RBP7.37□□□□□ -1.23
GPHN-214ENST00000556633 SLC27A5Q9Y2P5 690 aa7.37□□□□□ -1.23
GPHN-214ENST00000556633 CFAP99D6REC4 459 aa7.36□□□□□ -1.23
GPHN-214ENST00000556633 CTDSPL2Q05D32 466 aa7.36□□□□□ -1.23
GPHN-214ENST00000556633 Q3C1V9 767 aa7.36□□□□□ -1.23
GPHN-214ENST00000556633 PROSER2Q86WR7 435 aaPredicted RBP7.36□□□□□ -1.23
GPHN-214ENST00000556633 WBP1LQ9NX94 342 aa7.36□□□□□ -1.23
GPHN-214ENST00000556633 COG6Q9Y2V7 657 aa7.36□□□□□ -1.23
GPHN-214ENST00000556633 APBB1O00213 710 aa7.35□□□□□ -1.23
GPHN-214ENST00000556633 TRAK2O60296 914 aa7.35□□□□□ -1.23
GPHN-214ENST00000556633 THSD4Q6ZMP0 1018 aa7.35□□□□□ -1.23
GPHN-214ENST00000556633 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
GPHN-214ENST00000556633 PCDHB3Q9Y5E6 796 aa7.35□□□□□ -1.23
GPHN-214ENST00000556633 SOCS7O14512 581 aa7.34□□□□□ -1.23
GPHN-214ENST00000556633 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
GPHN-214ENST00000556633 RETREG3Q86VR2 466 aa7.34□□□□□ -1.23
GPHN-214ENST00000556633 KCTD12Q96CX2 325 aaKnown RBP7.34□□□□□ -1.23
GPHN-214ENST00000556633 GDPD2Q9HCC8 539 aa7.34□□□□□ -1.23
GPHN-214ENST00000556633 ARID3CA6NKF2 412 aa7.33□□□□□ -1.24
GPHN-214ENST00000556633 NR1I2O75469 434 aa7.33□□□□□ -1.24
GPHN-214ENST00000556633 BLOC1S3Q6QNY0 202 aa7.33□□□□□ -1.24
GPHN-214ENST00000556633 RNF19BQ6ZMZ0 732 aa7.33□□□□□ -1.24
GPHN-214ENST00000556633 CDAN1Q8IWY9 1227 aa7.33□□□□□ -1.24
GPHN-214ENST00000556633 POTEMA6NI47 508 aa7.32□□□□□ -1.24
GPHN-214ENST00000556633 SCUBE3Q8IX30 993 aa7.32□□□□□ -1.24
GPHN-214ENST00000556633 FNBP4Q8N3X1 1017 aaPredicted RBP7.32□□□□□ -1.24
GPHN-214ENST00000556633 LRRN4Q8WUT4 740 aa7.32□□□□□ -1.24
GPHN-214ENST00000556633 C1orf115Q9H7X2 142 aa7.32□□□□□ -1.24
GPHN-214ENST00000556633 PRM3Q9NNZ6 103 aa7.32□□□□□ -1.24
GPHN-214ENST00000556633 HMX1Q9NP08 348 aaPredicted RBP7.32□□□□□ -1.24
GPHN-214ENST00000556633 ABL2P42684 1182 aa7.31□□□□□ -1.24
GPHN-214ENST00000556633 GJD4Q96KN9 370 aaPredicted RBP7.31□□□□□ -1.24
GPHN-214ENST00000556633 USB1Q9BQ65 265 aaKnown RBP7.31□□□□□ -1.24
GPHN-214ENST00000556633 TBC1D2BQ9UPU7 963 aa7.31□□□□□ -1.24
GPHN-214ENST00000556633 FMNL1O95466 1100 aaPredicted RBP7.3□□□□□ -1.24
GPHN-214ENST00000556633 BRICD5Q6PL45 260 aa7.3□□□□□ -1.24
GPHN-214ENST00000556633 SALL2Q9Y467 1007 aaPredicted RBP7.3□□□□□ -1.24
GPHN-214ENST00000556633 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
GPHN-214ENST00000556633 PER1O15534 1290 aaPredicted RBP7.29□□□□□ -1.24
GPHN-214ENST00000556633 COPS2P61201 443 aa7.29□□□□□ -1.24
GPHN-214ENST00000556633 DESI1Q6ICB0 168 aa7.29□□□□□ -1.24
GPHN-214ENST00000556633 THAP11Q96EK4 314 aa7.29□□□□□ -1.24
GPHN-214ENST00000556633 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
GPHN-214ENST00000556633 ZNF777Q9ULD5 760 aaPredicted RBP7.29□□□□□ -1.24
GPHN-214ENST00000556633 PTPN5P54829 565 aa7.28□□□□□ -1.24
GPHN-214ENST00000556633 WWC1Q8IX03 1113 aa7.28□□□□□ -1.24
GPHN-214ENST00000556633 ARID3AQ99856 593 aa7.28□□□□□ -1.24
GPHN-214ENST00000556633 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
GPHN-214ENST00000556633 NYAP1Q6ZVC0 841 aa7.27□□□□□ -1.25
GPHN-214ENST00000556633 ARXQ96QS3 562 aa7.27□□□□□ -1.25
GPHN-214ENST00000556633 NR6A1Q15406 480 aa7.26□□□□□ -1.25
GPHN-214ENST00000556633 LYPD8Q6UX82 237 aa7.26□□□□□ -1.25
GPHN-214ENST00000556633 EPS8L1Q8TE68 723 aa7.26□□□□□ -1.25
GPHN-214ENST00000556633 SPSB2Q99619 263 aa7.26□□□□□ -1.25
GPHN-214ENST00000556633 TLL1O43897 1013 aa7.24□□□□□ -1.25
GPHN-214ENST00000556633 GPR37L1O60883 481 aa7.24□□□□□ -1.25
GPHN-214ENST00000556633 JUNDP17535 347 aa7.24□□□□□ -1.25
GPHN-214ENST00000556633 CCDC82Q8N4S0 544 aa7.24□□□□□ -1.25
GPHN-214ENST00000556633 MTRQ99707 1265 aa7.24□□□□□ -1.25
GPHN-214ENST00000556633 MYT1LQ9UL68 1186 aa7.24□□□□□ -1.25
GPHN-214ENST00000556633 ZPR1O75312 459 aa7.23□□□□□ -1.25
GPHN-214ENST00000556633 IRF5Q13568 498 aa7.23□□□□□ -1.25
GPHN-214ENST00000556633 PTPRNQ16849 979 aa7.23□□□□□ -1.25
GPHN-214ENST00000556633 MSS51Q4VC12 460 aa7.23□□□□□ -1.25
GPHN-214ENST00000556633 FAM160A2Q8N612 972 aaPredicted RBP7.23□□□□□ -1.25
GPHN-214ENST00000556633 POM121CA8CG34 1229 aa7.22□□□□□ -1.25
GPHN-214ENST00000556633 PRDM9Q9NQV7 894 aa7.22□□□□□ -1.25
GPHN-214ENST00000556633 PLSCR2Q9NRY7 297 aa7.22□□□□□ -1.25
GPHN-214ENST00000556633 DXOO77932 396 aaKnown RBP7.21□□□□□ -1.26
GPHN-214ENST00000556633 ADH1BP00325 375 aa7.21□□□□□ -1.26
GPHN-214ENST00000556633 TJAP1Q5JTD0 557 aa7.21□□□□□ -1.26
GPHN-214ENST00000556633 HOMEZQ8IX15 550 aa7.21□□□□□ -1.26
GPHN-214ENST00000556633 PNMA1Q8ND90 353 aa7.21□□□□□ -1.26
GPHN-214ENST00000556633 IL21Q9HBE4 155 aa7.21□□□□□ -1.26
GPHN-214ENST00000556633 MAP10Q9P2G4 905 aa7.21□□□□□ -1.26
GPHN-214ENST00000556633 F12P00748 615 aaPredicted RBP7.2□□□□□ -1.26
GPHN-214ENST00000556633 CTHP32929 405 aa7.2□□□□□ -1.26
GPHN-214ENST00000556633 MMP16P51512 607 aa7.2□□□□□ -1.26
GPHN-214ENST00000556633 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
GPHN-214ENST00000556633 ZNF516Q92618 1163 aa7.2□□□□□ -1.26
GPHN-214ENST00000556633 CCDC97Q96F63 343 aaPredicted RBP7.2□□□□□ -1.26
GPHN-214ENST00000556633 CCNYL3P0C7X3 344 aa7.19□□□□□ -1.26
GPHN-214ENST00000556633 VAC14Q08AM6 782 aa7.19□□□□□ -1.26
GPHN-214ENST00000556633 GLMNQ92990 594 aa7.19□□□□□ -1.26
GPHN-214ENST00000556633 CALR3Q96L12 384 aaKnown RBP7.19□□□□□ -1.26
GPHN-214ENST00000556633 NUDT12Q9BQG2 462 aa7.19□□□□□ -1.26
GPHN-214ENST00000556633 SERPINA10Q9UK55 444 aa7.18□□□□□ -1.26
GPHN-214ENST00000556633 SLC6A16Q9GZN6 736 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms