RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 METP08581 1390 aa24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 HDGFP51858 240 aaKnown RBP24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 TMEM2Q9UHN6 1383 aa24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 PLEKHH1Q9ULM0 1364 aa24.52■■□□□ 1.52
SDR39U1-220ENST00000556548 PUS7Q96PZ0 661 aaKnown RBP24.51■■□□□ 1.51
SDR39U1-220ENST00000556548 CDK19Q9BWU1 502 aa24.5■■□□□ 1.51
SDR39U1-220ENST00000556548 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
SDR39U1-220ENST00000556548 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 NRXN3Q9Y4C0 1643 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 LTKP29376 864 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 WDR43Q15061 677 aaKnown RBP eCLIP24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 SETD1AO15047 1707 aaKnown RBP24.48■■□□□ 1.51
SDR39U1-220ENST00000556548 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
SDR39U1-220ENST00000556548 C3P01024 1663 aa24.47■■□□□ 1.51
SDR39U1-220ENST00000556548 NUDCQ9Y266 331 aa24.47■■□□□ 1.51
SDR39U1-220ENST00000556548 SMG6Q86US8 1419 aaKnown RBP24.46■■□□□ 1.51
SDR39U1-220ENST00000556548 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
SDR39U1-220ENST00000556548 FER1L4A9Z1Z3 1794 aa24.46■■□□□ 1.51
SDR39U1-220ENST00000556548 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.51
SDR39U1-220ENST00000556548 ABCC11Q96J66 1382 aa24.45■■□□□ 1.5
SDR39U1-220ENST00000556548 NLRP1Q9C000 1473 aa24.44■■□□□ 1.5
SDR39U1-220ENST00000556548 A0A1W2PP64 1363 aa24.44■■□□□ 1.5
SDR39U1-220ENST00000556548 BLMP54132 1417 aaPredicted RBP24.43■■□□□ 1.5
SDR39U1-220ENST00000556548 ATAD2Q6PL18 1390 aa24.42■■□□□ 1.5
SDR39U1-220ENST00000556548 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
SDR39U1-220ENST00000556548 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
SDR39U1-220ENST00000556548 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
SDR39U1-220ENST00000556548 CCDC146Q8IYE0 955 aa24.39■■□□□ 1.5
SDR39U1-220ENST00000556548 EID1Q9Y6B2 187 aa24.39■■□□□ 1.5
SDR39U1-220ENST00000556548 CDCA7LQ96GN5 454 aa24.38■■□□□ 1.49
SDR39U1-220ENST00000556548 TERF2IPQ9NYB0 399 aa24.38■■□□□ 1.49
SDR39U1-220ENST00000556548 ADAMTS13Q76LX8 1427 aa24.37■■□□□ 1.49
SDR39U1-220ENST00000556548 GGNBP2Q9H3C7 697 aa24.37■■□□□ 1.49
SDR39U1-220ENST00000556548 NINLQ9Y2I6 1382 aa24.37■■□□□ 1.49
SDR39U1-220ENST00000556548 INSRP06213 1382 aa24.35■■□□□ 1.49
SDR39U1-220ENST00000556548 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
SDR39U1-220ENST00000556548 CD163L1Q9NR16 1453 aa24.35■■□□□ 1.49
SDR39U1-220ENST00000556548 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
SDR39U1-220ENST00000556548 HDGFL2Q7Z4V5 671 aaPredicted RBP24.34■■□□□ 1.49
SDR39U1-220ENST00000556548 MTHFSP49914 203 aa24.34■■□□□ 1.49
SDR39U1-220ENST00000556548 THEMISQ8N1K5 641 aaPredicted RBP24.33■■□□□ 1.49
SDR39U1-220ENST00000556548 USP32Q8NFA0 1604 aa24.33■■□□□ 1.48
SDR39U1-220ENST00000556548 ROBO2Q9HCK4 1378 aa24.32■■□□□ 1.48
SDR39U1-220ENST00000556548 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
SDR39U1-220ENST00000556548 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
SDR39U1-220ENST00000556548 FYB1O15117 783 aa24.3■■□□□ 1.48
SDR39U1-220ENST00000556548 POLR3AO14802 1390 aaPredicted RBP24.3■■□□□ 1.48
SDR39U1-220ENST00000556548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.3■■□□□ 1.48
SDR39U1-220ENST00000556548 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
SDR39U1-220ENST00000556548 NSD2O96028 1365 aa24.29■■□□□ 1.48
SDR39U1-220ENST00000556548 TECPR2O15040 1411 aa24.28■■□□□ 1.48
SDR39U1-220ENST00000556548 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
SDR39U1-220ENST00000556548 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
SDR39U1-220ENST00000556548 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 APAF1O14727 1248 aa24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 NUDT16Q96DE0 195 aaKnown RBP24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 SLIT1O75093 1534 aa24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
SDR39U1-220ENST00000556548 NUTM2FA1L443 756 aa24.26■■□□□ 1.47
SDR39U1-220ENST00000556548 CPS1P31327 1500 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 PTPRUQ92729 1446 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 KNDC1Q76NI1 1749 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 CFAP53Q96M91 514 aa24.23■■□□□ 1.47
SDR39U1-220ENST00000556548 MED14O60244 1454 aa24.23■■□□□ 1.47
SDR39U1-220ENST00000556548 RCAN3Q9UKA8 241 aa24.21■■□□□ 1.47
SDR39U1-220ENST00000556548 TBX22Q9Y458 520 aa24.21■■□□□ 1.47
SDR39U1-220ENST00000556548 CCDC61Q9Y6R9 512 aa24.21■■□□□ 1.47
SDR39U1-220ENST00000556548 FBLN1P23142 703 aa24.2■■□□□ 1.46
SDR39U1-220ENST00000556548 PRR36Q9H6K5 1346 aa24.2■■□□□ 1.46
SDR39U1-220ENST00000556548 RNF123Q5XPI4 1314 aa24.19■■□□□ 1.46
SDR39U1-220ENST00000556548 ATP7BP35670 1465 aa24.19■■□□□ 1.46
SDR39U1-220ENST00000556548 CEP170BQ9Y4F5 1589 aaPredicted RBP24.18■■□□□ 1.46
SDR39U1-220ENST00000556548 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
SDR39U1-220ENST00000556548 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.17■■□□□ 1.46
SDR39U1-220ENST00000556548 ZNF521Q96K83 1311 aa24.17■■□□□ 1.46
SDR39U1-220ENST00000556548 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
SDR39U1-220ENST00000556548 ERICH6BQ5W0A0 696 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 PPP4R2Q9NY27 417 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 GOLGA2Q08379 1002 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 U2AF1L5P0DN76 240 aaPredicted RBP24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 U2AF1Q01081 240 aaKnown RBP eCLIP24.15■■□□□ 1.462e-8■■■■□ 22.5
SDR39U1-220ENST00000556548 NME9Q86XW9 330 aa24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 CPSF1Q10570 1443 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 ANP32EQ9BTT0 268 aa24.14■■□□□ 1.45
SDR39U1-220ENST00000556548 PPM1GO15355 546 aaPredicted RBP24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 B4GALNT3Q6L9W6 998 aa24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 RRP1P56182 461 aaKnown RBP24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 SPINK5Q9NQ38 1064 aaPredicted RBP24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 ADAMTSL3P82987 1691 aa24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 DUSP27Q5VZP5 1158 aa24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 RUNDC1Q96C34 613 aa24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
SDR39U1-220ENST00000556548 KCNA6P17658 529 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms