RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 METP08581 1390 aa24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 HDGFP51858 240 aaKnown RBP24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 TMEM2Q9UHN6 1383 aa24.53■■□□□ 1.52
SDR39U1-220ENST00000556548 PLEKHH1Q9ULM0 1364 aa24.52■■□□□ 1.52
SDR39U1-220ENST00000556548 PUS7Q96PZ0 661 aaKnown RBP24.51■■□□□ 1.51
SDR39U1-220ENST00000556548 CDK19Q9BWU1 502 aa24.5■■□□□ 1.51
SDR39U1-220ENST00000556548 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
SDR39U1-220ENST00000556548 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 NRXN3Q9Y4C0 1643 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 LTKP29376 864 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 WDR43Q15061 677 aaKnown RBP eCLIP24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
SDR39U1-220ENST00000556548 SETD1AO15047 1707 aaKnown RBP24.48■■□□□ 1.51
SDR39U1-220ENST00000556548 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
SDR39U1-220ENST00000556548 C3P01024 1663 aa24.47■■□□□ 1.51
SDR39U1-220ENST00000556548 NUDCQ9Y266 331 aa24.47■■□□□ 1.51
SDR39U1-220ENST00000556548 SMG6Q86US8 1419 aaKnown RBP24.46■■□□□ 1.51
SDR39U1-220ENST00000556548 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
SDR39U1-220ENST00000556548 FER1L4A9Z1Z3 1794 aa24.46■■□□□ 1.51
SDR39U1-220ENST00000556548 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.51
SDR39U1-220ENST00000556548 ABCC11Q96J66 1382 aa24.45■■□□□ 1.5
SDR39U1-220ENST00000556548 NLRP1Q9C000 1473 aa24.44■■□□□ 1.5
SDR39U1-220ENST00000556548 A0A1W2PP64 1363 aa24.44■■□□□ 1.5
SDR39U1-220ENST00000556548 BLMP54132 1417 aaPredicted RBP24.43■■□□□ 1.5
SDR39U1-220ENST00000556548 ATAD2Q6PL18 1390 aa24.42■■□□□ 1.5
SDR39U1-220ENST00000556548 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
SDR39U1-220ENST00000556548 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
SDR39U1-220ENST00000556548 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
SDR39U1-220ENST00000556548 CCDC146Q8IYE0 955 aa24.39■■□□□ 1.5
SDR39U1-220ENST00000556548 EID1Q9Y6B2 187 aa24.39■■□□□ 1.5
SDR39U1-220ENST00000556548 CDCA7LQ96GN5 454 aa24.38■■□□□ 1.49
SDR39U1-220ENST00000556548 TERF2IPQ9NYB0 399 aa24.38■■□□□ 1.49
SDR39U1-220ENST00000556548 ADAMTS13Q76LX8 1427 aa24.37■■□□□ 1.49
SDR39U1-220ENST00000556548 GGNBP2Q9H3C7 697 aa24.37■■□□□ 1.49
SDR39U1-220ENST00000556548 NINLQ9Y2I6 1382 aa24.37■■□□□ 1.49
SDR39U1-220ENST00000556548 INSRP06213 1382 aa24.35■■□□□ 1.49
SDR39U1-220ENST00000556548 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
SDR39U1-220ENST00000556548 CD163L1Q9NR16 1453 aa24.35■■□□□ 1.49
SDR39U1-220ENST00000556548 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
SDR39U1-220ENST00000556548 HDGFL2Q7Z4V5 671 aaPredicted RBP24.34■■□□□ 1.49
SDR39U1-220ENST00000556548 MTHFSP49914 203 aa24.34■■□□□ 1.49
SDR39U1-220ENST00000556548 THEMISQ8N1K5 641 aaPredicted RBP24.33■■□□□ 1.49
SDR39U1-220ENST00000556548 USP32Q8NFA0 1604 aa24.33■■□□□ 1.48
SDR39U1-220ENST00000556548 ROBO2Q9HCK4 1378 aa24.32■■□□□ 1.48
SDR39U1-220ENST00000556548 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
SDR39U1-220ENST00000556548 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
SDR39U1-220ENST00000556548 FYB1O15117 783 aa24.3■■□□□ 1.48
SDR39U1-220ENST00000556548 POLR3AO14802 1390 aaPredicted RBP24.3■■□□□ 1.48
SDR39U1-220ENST00000556548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.3■■□□□ 1.48
SDR39U1-220ENST00000556548 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
SDR39U1-220ENST00000556548 NSD2O96028 1365 aa24.29■■□□□ 1.48
SDR39U1-220ENST00000556548 TECPR2O15040 1411 aa24.28■■□□□ 1.48
SDR39U1-220ENST00000556548 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
SDR39U1-220ENST00000556548 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
SDR39U1-220ENST00000556548 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 APAF1O14727 1248 aa24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 NUDT16Q96DE0 195 aaKnown RBP24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 SLIT1O75093 1534 aa24.27■■□□□ 1.48
SDR39U1-220ENST00000556548 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
SDR39U1-220ENST00000556548 NUTM2FA1L443 756 aa24.26■■□□□ 1.47
SDR39U1-220ENST00000556548 CPS1P31327 1500 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 PTPRUQ92729 1446 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 KNDC1Q76NI1 1749 aa24.25■■□□□ 1.47
SDR39U1-220ENST00000556548 CFAP53Q96M91 514 aa24.23■■□□□ 1.47
SDR39U1-220ENST00000556548 MED14O60244 1454 aa24.23■■□□□ 1.47
SDR39U1-220ENST00000556548 RCAN3Q9UKA8 241 aa24.21■■□□□ 1.47
SDR39U1-220ENST00000556548 TBX22Q9Y458 520 aa24.21■■□□□ 1.47
SDR39U1-220ENST00000556548 CCDC61Q9Y6R9 512 aa24.21■■□□□ 1.47
SDR39U1-220ENST00000556548 FBLN1P23142 703 aa24.2■■□□□ 1.46
SDR39U1-220ENST00000556548 PRR36Q9H6K5 1346 aa24.2■■□□□ 1.46
SDR39U1-220ENST00000556548 RNF123Q5XPI4 1314 aa24.19■■□□□ 1.46
SDR39U1-220ENST00000556548 ATP7BP35670 1465 aa24.19■■□□□ 1.46
SDR39U1-220ENST00000556548 CEP170BQ9Y4F5 1589 aaPredicted RBP24.18■■□□□ 1.46
SDR39U1-220ENST00000556548 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
SDR39U1-220ENST00000556548 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.17■■□□□ 1.46
SDR39U1-220ENST00000556548 ZNF521Q96K83 1311 aa24.17■■□□□ 1.46
SDR39U1-220ENST00000556548 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
SDR39U1-220ENST00000556548 ERICH6BQ5W0A0 696 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 PPP4R2Q9NY27 417 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 GOLGA2Q08379 1002 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
SDR39U1-220ENST00000556548 U2AF1L5P0DN76 240 aaPredicted RBP24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 U2AF1Q01081 240 aaKnown RBP eCLIP24.15■■□□□ 1.462e-8■■■■□ 22.5
SDR39U1-220ENST00000556548 NME9Q86XW9 330 aa24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 CPSF1Q10570 1443 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-220ENST00000556548 ANP32EQ9BTT0 268 aa24.14■■□□□ 1.45
SDR39U1-220ENST00000556548 PPM1GO15355 546 aaPredicted RBP24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 B4GALNT3Q6L9W6 998 aa24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 RRP1P56182 461 aaKnown RBP24.13■■□□□ 1.45
SDR39U1-220ENST00000556548 SPINK5Q9NQ38 1064 aaPredicted RBP24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 ADAMTSL3P82987 1691 aa24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 DUSP27Q5VZP5 1158 aa24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 RUNDC1Q96C34 613 aa24.12■■□□□ 1.45
SDR39U1-220ENST00000556548 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
SDR39U1-220ENST00000556548 KCNA6P17658 529 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms