RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
PCNX1-212ENST00000556516 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
PCNX1-212ENST00000556516 GJA5P36382 358 aa9.47□□□□□ -0.89
PCNX1-212ENST00000556516 TUSC1Q2TAM9 212 aa9.47□□□□□ -0.89
PCNX1-212ENST00000556516 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
PCNX1-212ENST00000556516 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
PCNX1-212ENST00000556516 AP1G2O75843 785 aa9.46□□□□□ -0.9
PCNX1-212ENST00000556516 MTMR2Q13614 643 aa9.46□□□□□ -0.9
PCNX1-212ENST00000556516 PPP2R2DQ66LE6 453 aa9.46□□□□□ -0.9
PCNX1-212ENST00000556516 PRR14Q9BWN1 585 aa9.46□□□□□ -0.9
PCNX1-212ENST00000556516 SNRKQ9NRH2 765 aa9.46□□□□□ -0.9
PCNX1-212ENST00000556516 TLL1O43897 1013 aa9.45□□□□□ -0.9
PCNX1-212ENST00000556516 SCUBE3Q8IX30 993 aa9.45□□□□□ -0.9
PCNX1-212ENST00000556516 MCM6Q14566 821 aa9.44□□□□□ -0.9
PCNX1-212ENST00000556516 PRPF38BQ5VTL8 546 aaKnown RBP9.44□□□□□ -0.9
PCNX1-212ENST00000556516 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-212ENST00000556516 MTRQ99707 1265 aa9.43□□□□□ -0.9
PCNX1-212ENST00000556516 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
PCNX1-212ENST00000556516 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
PCNX1-212ENST00000556516 NR1I2O75469 434 aa9.41□□□□□ -0.9
PCNX1-212ENST00000556516 USP17L8P0C7I0 530 aa9.41□□□□□ -0.9
PCNX1-212ENST00000556516 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
PCNX1-212ENST00000556516 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
PCNX1-212ENST00000556516 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
PCNX1-212ENST00000556516 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
PCNX1-212ENST00000556516 POM121Q96HA1 1249 aa9.4□□□□□ -0.9
PCNX1-212ENST00000556516 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-212ENST00000556516 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
PCNX1-212ENST00000556516 PER1O15534 1290 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-212ENST00000556516 Q3C1V9 767 aa9.39□□□□□ -0.91
PCNX1-212ENST00000556516 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
PCNX1-212ENST00000556516 MTMR14Q8NCE2 650 aa9.39□□□□□ -0.91
PCNX1-212ENST00000556516 LRRN4Q8WUT4 740 aa9.39□□□□□ -0.91
PCNX1-212ENST00000556516 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-212ENST00000556516 FLIIQ13045 1269 aa9.38□□□□□ -0.91
PCNX1-212ENST00000556516 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
PCNX1-212ENST00000556516 TJAP1Q5JTD0 557 aa9.38□□□□□ -0.91
PCNX1-212ENST00000556516 USB1Q9BQ65 265 aaKnown RBP9.38□□□□□ -0.91
PCNX1-212ENST00000556516 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
PCNX1-212ENST00000556516 ZPR1O75312 459 aa9.37□□□□□ -0.91
PCNX1-212ENST00000556516 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
PCNX1-212ENST00000556516 UBTFP17480 764 aaKnown RBP9.36□□□□□ -0.91
PCNX1-212ENST00000556516 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
PCNX1-212ENST00000556516 FAM160A2Q8N612 972 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-212ENST00000556516 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-212ENST00000556516 SPSB2Q99619 263 aa9.36□□□□□ -0.91
PCNX1-212ENST00000556516 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
PCNX1-212ENST00000556516 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
PCNX1-212ENST00000556516 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
PCNX1-212ENST00000556516 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
PCNX1-212ENST00000556516 SUPT5HO00267 1087 aaKnown RBP9.33□□□□□ -0.92
PCNX1-212ENST00000556516 IL21Q9HBE4 155 aa9.33□□□□□ -0.92
PCNX1-212ENST00000556516 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
PCNX1-212ENST00000556516 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
PCNX1-212ENST00000556516 TBC1D2BQ9UPU7 963 aa9.32□□□□□ -0.92
PCNX1-212ENST00000556516 SALL2Q9Y467 1007 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-212ENST00000556516 ADH1BP00325 375 aa9.31□□□□□ -0.92
PCNX1-212ENST00000556516 NR6A1Q15406 480 aa9.31□□□□□ -0.92
PCNX1-212ENST00000556516 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-212ENST00000556516 GDPD2Q9HCC8 539 aa9.31□□□□□ -0.92
PCNX1-212ENST00000556516 COG6Q9Y2V7 657 aa9.31□□□□□ -0.92
PCNX1-212ENST00000556516 JUNDP17535 347 aa9.3□□□□□ -0.92
PCNX1-212ENST00000556516 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
PCNX1-212ENST00000556516 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
PCNX1-212ENST00000556516 S1PR4O95977 384 aa9.29□□□□□ -0.92
PCNX1-212ENST00000556516 MSS51Q4VC12 460 aa9.29□□□□□ -0.92
PCNX1-212ENST00000556516 ABL2P42684 1182 aa9.28□□□□□ -0.92
PCNX1-212ENST00000556516 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
PCNX1-212ENST00000556516 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
PCNX1-212ENST00000556516 DESI1Q6ICB0 168 aa9.27□□□□□ -0.93
PCNX1-212ENST00000556516 ERICH6Q7L0X2 663 aa9.27□□□□□ -0.93
PCNX1-212ENST00000556516 SLC6A16Q9GZN6 736 aa9.27□□□□□ -0.93
PCNX1-212ENST00000556516 ARID3CA6NKF2 412 aa9.26□□□□□ -0.93
PCNX1-212ENST00000556516 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
PCNX1-212ENST00000556516 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
PCNX1-212ENST00000556516 RAD21O60216 631 aa9.25□□□□□ -0.93
PCNX1-212ENST00000556516 GPR37L1O60883 481 aa9.25□□□□□ -0.93
PCNX1-212ENST00000556516 CTHP32929 405 aa9.25□□□□□ -0.93
PCNX1-212ENST00000556516 MMP16P51512 607 aa9.25□□□□□ -0.93
PCNX1-212ENST00000556516 NUDT12Q9BQG2 462 aa9.25□□□□□ -0.93
PCNX1-212ENST00000556516 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-212ENST00000556516 KCNC4Q03721 635 aa9.24□□□□□ -0.93
PCNX1-212ENST00000556516 PTPRNQ16849 979 aa9.24□□□□□ -0.93
PCNX1-212ENST00000556516 PROSER2Q86WR7 435 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-212ENST00000556516 ITGBL1O95965 494 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-212ENST00000556516 CCNYL3P0C7X3 344 aa9.23□□□□□ -0.93
PCNX1-212ENST00000556516 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
PCNX1-212ENST00000556516 A6NJR5 290 aa9.22□□□□□ -0.93
PCNX1-212ENST00000556516 PTCRAQ6ISU1 281 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-212ENST00000556516 FCF1Q9Y324 198 aaKnown RBP9.22□□□□□ -0.93
PCNX1-212ENST00000556516 IRF5Q13568 498 aa9.21□□□□□ -0.94
PCNX1-212ENST00000556516 TRAK2O60296 914 aa9.2□□□□□ -0.94
PCNX1-212ENST00000556516 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-212ENST00000556516 C1orf115Q9H7X2 142 aa9.2□□□□□ -0.94
PCNX1-212ENST00000556516 ZNF777Q9ULD5 760 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-212ENST00000556516 POM121CA8CG34 1229 aa9.19□□□□□ -0.94
PCNX1-212ENST00000556516 APBB1O00213 710 aa9.19□□□□□ -0.94
PCNX1-212ENST00000556516 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
PCNX1-212ENST00000556516 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
PCNX1-212ENST00000556516 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms