RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
TGFB3-205ENST00000556507 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
TGFB3-205ENST00000556507 SPRYD7Q5W111 196 aa6.81□□□□□ -1.32
TGFB3-205ENST00000556507 LIAT1Q6ZQX7 453 aa6.81□□□□□ -1.32
TGFB3-205ENST00000556507 USB1Q9BQ65 265 aaKnown RBP6.81□□□□□ -1.32
TGFB3-205ENST00000556507 PRDM9Q9NQV7 894 aa6.81□□□□□ -1.32
TGFB3-205ENST00000556507 FCF1Q9Y324 198 aaKnown RBP6.81□□□□□ -1.32
TGFB3-205ENST00000556507 FDX1P10109 184 aa6.79□□□□□ -1.32
TGFB3-205ENST00000556507 MS4A1P11836 297 aa6.79□□□□□ -1.32
TGFB3-205ENST00000556507 Q6ZNB5 142 aa6.79□□□□□ -1.32
TGFB3-205ENST00000556507 ZNF598Q86UK7 904 aaKnown RBP6.79□□□□□ -1.32
TGFB3-205ENST00000556507 PDZRN3Q9UPQ7 1066 aa6.79□□□□□ -1.32
TGFB3-205ENST00000556507 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
TGFB3-205ENST00000556507 NDUFV2P19404 249 aa6.78□□□□□ -1.32
TGFB3-205ENST00000556507 MMP16P51512 607 aa6.78□□□□□ -1.32
TGFB3-205ENST00000556507 SYMPKQ92797 1274 aaKnown RBP6.78□□□□□ -1.32
TGFB3-205ENST00000556507 MOXD2PA6NHM9 499 aa6.77□□□□□ -1.33
TGFB3-205ENST00000556507 C6orf229H3BNL8 230 aa6.77□□□□□ -1.33
TGFB3-205ENST00000556507 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
TGFB3-205ENST00000556507 DIXDC1Q155Q3 683 aa6.77□□□□□ -1.33
TGFB3-205ENST00000556507 ZNF697Q5TEC3 545 aa6.77□□□□□ -1.33
TGFB3-205ENST00000556507 TBC1D2Q9BYX2 928 aa6.77□□□□□ -1.33
TGFB3-205ENST00000556507 PCDHGC3Q9UN70 934 aa6.77□□□□□ -1.33
TGFB3-205ENST00000556507 ZBTB24O43167 697 aaPredicted RBP6.76□□□□□ -1.33
TGFB3-205ENST00000556507 CD2BP2O95400 341 aaKnown RBP6.76□□□□□ -1.33
TGFB3-205ENST00000556507 RPIAP49247 311 aa6.76□□□□□ -1.33
TGFB3-205ENST00000556507 RETREG3Q86VR2 466 aa6.76□□□□□ -1.33
TGFB3-205ENST00000556507 DXOO77932 396 aaKnown RBP6.75□□□□□ -1.33
TGFB3-205ENST00000556507 CCDC24Q8N4L8 307 aa6.74□□□□□ -1.33
TGFB3-205ENST00000556507 JUNDP17535 347 aa6.73□□□□□ -1.33
TGFB3-205ENST00000556507 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
TGFB3-205ENST00000556507 TRIM67Q6ZTA4 783 aa6.73□□□□□ -1.33
TGFB3-205ENST00000556507 TNFRSF10AO00220 468 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 GJA5P36382 358 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 PRR20EP86478 221 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 PRR20CP86479 221 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 PRR20DP86480 221 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 PRR20BP86481 221 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 PRR20AP86496 221 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 FOXC1Q12948 553 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 MTMR2Q13614 643 aa6.72□□□□□ -1.33
TGFB3-205ENST00000556507 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 SPTLC1O15269 473 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 GDF9O60383 454 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 TRAF7Q6Q0C0 670 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 RIC3Q7Z5B4 369 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 PRR7Q8TB68 274 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 PCDHB15Q9Y5E8 787 aa6.71□□□□□ -1.34
TGFB3-205ENST00000556507 TRIM32Q13049 653 aa6.7□□□□□ -1.34
TGFB3-205ENST00000556507 NUDT12Q9BQG2 462 aa6.7□□□□□ -1.34
TGFB3-205ENST00000556507 CSPP1Q1MSJ5 1256 aa6.69□□□□□ -1.34
TGFB3-205ENST00000556507 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
TGFB3-205ENST00000556507 ZBTB3Q9H5J0 574 aa6.69□□□□□ -1.34
TGFB3-205ENST00000556507 PKD2L1Q9P0L9 805 aa6.69□□□□□ -1.34
TGFB3-205ENST00000556507 MYO15BQ96JP2 1530 aa6.68□□□□□ -1.34
TGFB3-205ENST00000556507 HRCP23327 699 aa6.68□□□□□ -1.34
TGFB3-205ENST00000556507 PKDCCQ504Y2 493 aa6.68□□□□□ -1.34
TGFB3-205ENST00000556507 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
TGFB3-205ENST00000556507 RSPH6AQ9H0K4 717 aa6.68□□□□□ -1.34
TGFB3-205ENST00000556507 KDM4CQ9H3R0 1056 aa6.68□□□□□ -1.34
TGFB3-205ENST00000556507 GPBP1L1Q9HC44 474 aaPredicted RBP6.68□□□□□ -1.34
TGFB3-205ENST00000556507 DGAT1O75907 488 aa6.67□□□□□ -1.34
TGFB3-205ENST00000556507 CCNYL3P0C7X3 344 aa6.67□□□□□ -1.34
TGFB3-205ENST00000556507 PTPRNQ16849 979 aa6.67□□□□□ -1.34
TGFB3-205ENST00000556507 DESI1Q6ICB0 168 aa6.67□□□□□ -1.34
TGFB3-205ENST00000556507 LIMD1Q9UGP4 676 aa6.67□□□□□ -1.34
TGFB3-205ENST00000556507 FAM187AA6NFU0 413 aa6.66□□□□□ -1.34
TGFB3-205ENST00000556507 NUTM2BA6NNL0 878 aaPredicted RBP6.66□□□□□ -1.34
TGFB3-205ENST00000556507 NUTM2EB1AL46 878 aaPredicted RBP6.66□□□□□ -1.34
TGFB3-205ENST00000556507 LCE2BO14633 110 aa6.66□□□□□ -1.34
TGFB3-205ENST00000556507 NUTM2DQ5VT03 806 aaPredicted RBP6.66□□□□□ -1.34
TGFB3-205ENST00000556507 PTCRAQ6ISU1 281 aaPredicted RBP6.66□□□□□ -1.34
TGFB3-205ENST00000556507 NUTM2AQ8IVF1 878 aaPredicted RBP6.66□□□□□ -1.34
TGFB3-205ENST00000556507 CYP4X1Q8N118 509 aa6.66□□□□□ -1.34
TGFB3-205ENST00000556507 CABLES1Q8TDN4 633 aa6.66□□□□□ -1.34
TGFB3-205ENST00000556507 CFAP99D6REC4 459 aa6.65□□□□□ -1.34
TGFB3-205ENST00000556507 WNT7AO00755 349 aa6.65□□□□□ -1.34
TGFB3-205ENST00000556507 CLK2P49760 499 aaKnown RBP6.65□□□□□ -1.34
TGFB3-205ENST00000556507 TUSC1Q2TAM9 212 aa6.65□□□□□ -1.34
TGFB3-205ENST00000556507 EVA1BQ9NVM1 165 aa6.65□□□□□ -1.34
TGFB3-205ENST00000556507 POLR3EQ9NVU0 708 aa6.65□□□□□ -1.34
TGFB3-205ENST00000556507 TTC24A2A3L6 582 aaPredicted RBP6.64□□□□□ -1.35
TGFB3-205ENST00000556507 WNT7BP56706 349 aa6.64□□□□□ -1.35
TGFB3-205ENST00000556507 QPCTQ16769 361 aa6.64□□□□□ -1.35
TGFB3-205ENST00000556507 LYPD8Q6UX82 237 aa6.64□□□□□ -1.35
TGFB3-205ENST00000556507 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
TGFB3-205ENST00000556507 FAM117AQ9C073 453 aa6.64□□□□□ -1.35
TGFB3-205ENST00000556507 TOR4AQ9NXH8 423 aa6.64□□□□□ -1.35
TGFB3-205ENST00000556507 LILRB3O75022 631 aa6.63□□□□□ -1.35
TGFB3-205ENST00000556507 SKOR1P84550 965 aa6.63□□□□□ -1.35
TGFB3-205ENST00000556507 KCNH2Q12809 1159 aa6.63□□□□□ -1.35
TGFB3-205ENST00000556507 RC3H1Q5TC82 1133 aaKnown RBP6.63□□□□□ -1.35
TGFB3-205ENST00000556507 TSC1Q92574 1164 aa6.63□□□□□ -1.35
TGFB3-205ENST00000556507 MRGPRX2Q96LB1 330 aa6.63□□□□□ -1.35
TGFB3-205ENST00000556507 UNC93B1Q9H1C4 597 aa6.63□□□□□ -1.35
TGFB3-205ENST00000556507 CTHP32929 405 aa6.62□□□□□ -1.35
TGFB3-205ENST00000556507 MYT1Q01538 1121 aa6.62□□□□□ -1.35
TGFB3-205ENST00000556507 SNIP1Q8TAD8 396 aaKnown RBP6.62□□□□□ -1.35
TGFB3-205ENST00000556507 ATP1B4Q9UN42 357 aaPredicted RBP6.62□□□□□ -1.35
TGFB3-205ENST00000556507 SKIV2LQ15477 1246 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms