RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 CLTCQ00610 1675 aaKnown RBP7.17□□□□□ -1.26
GPHN-213ENST00000556501 SENP3-EIF4A1A0A087X0R7 540 aa7.17□□□□□ -1.26
GPHN-213ENST00000556501 VASPP50552 380 aaPredicted RBP7.17□□□□□ -1.26
GPHN-213ENST00000556501 VSIG10Q8N0Z9 540 aa7.17□□□□□ -1.26
GPHN-213ENST00000556501 CCDC136Q96JN2 1154 aa7.17□□□□□ -1.26
GPHN-213ENST00000556501 CENPJQ9HC77 1338 aaPredicted RBP7.17□□□□□ -1.26
GPHN-213ENST00000556501 ZFYVE9O95405 1425 aa7.17□□□□□ -1.26
GPHN-213ENST00000556501 PRKCSHP14314 528 aaPredicted RBP7.16□□□□□ -1.26
GPHN-213ENST00000556501 ZNF521Q96K83 1311 aa7.16□□□□□ -1.26
GPHN-213ENST00000556501 PLEKHH1Q9ULM0 1364 aa7.16□□□□□ -1.26
GPHN-213ENST00000556501 YEATS2Q9ULM3 1422 aa7.16□□□□□ -1.26
GPHN-213ENST00000556501 ANKRD26Q9UPS8 1709 aa7.15□□□□□ -1.26
GPHN-213ENST00000556501 WDR43Q15061 677 aaKnown RBP eCLIP7.15□□□□□ -1.26
GPHN-213ENST00000556501 PROM2Q8N271 834 aa7.15□□□□□ -1.26
GPHN-213ENST00000556501 CDCA7LQ96GN5 454 aa7.15□□□□□ -1.26
GPHN-213ENST00000556501 C14orf93Q9H972 538 aaKnown RBP7.15□□□□□ -1.26
GPHN-213ENST00000556501 TAOK2Q9UL54 1235 aa7.15□□□□□ -1.26
GPHN-213ENST00000556501 POLR3AO14802 1390 aaPredicted RBP7.14□□□□□ -1.27
GPHN-213ENST00000556501 AGLP35573 1532 aa7.14□□□□□ -1.27
GPHN-213ENST00000556501 POTEHQ6S545 545 aa7.14□□□□□ -1.27
GPHN-213ENST00000556501 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
GPHN-213ENST00000556501 ADAMTS8Q9UP79 889 aa7.14□□□□□ -1.27
GPHN-213ENST00000556501 IQSEC2Q5JU85 1478 aa7.13□□□□□ -1.27
GPHN-213ENST00000556501 GGT6Q6P531 493 aa7.13□□□□□ -1.27
GPHN-213ENST00000556501 IFNLR1Q8IU57 520 aaPredicted RBP7.13□□□□□ -1.27
GPHN-213ENST00000556501 NGEFQ8N5V2 710 aa7.13□□□□□ -1.27
GPHN-213ENST00000556501 EXOC6Q8TAG9 804 aa7.13□□□□□ -1.27
GPHN-213ENST00000556501 PUS7Q96PZ0 661 aaKnown RBP7.13□□□□□ -1.27
GPHN-213ENST00000556501 CARD14Q9BXL6 1004 aa7.13□□□□□ -1.27
GPHN-213ENST00000556501 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
GPHN-213ENST00000556501 NSD2O96028 1365 aa7.12□□□□□ -1.27
GPHN-213ENST00000556501 RAPGEF3O95398 923 aa7.12□□□□□ -1.27
GPHN-213ENST00000556501 CHGAP10645 457 aaKnown RBP7.12□□□□□ -1.27
GPHN-213ENST00000556501 SETD1AO15047 1707 aaKnown RBP7.12□□□□□ -1.27
GPHN-213ENST00000556501 ARHGEF40Q8TER5 1519 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 PTPRMP28827 1452 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 NINLQ9Y2I6 1382 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 DUSP27Q5VZP5 1158 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 ADGRB2O60241 1585 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 SPATA31D1Q6ZQQ2 1576 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 NKTRP30414 1462 aaKnown RBP7.11□□□□□ -1.27
GPHN-213ENST00000556501 KIF20BQ96Q89 1820 aa7.11□□□□□ -1.27
GPHN-213ENST00000556501 ANKRD36BQ8N2N9 1353 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 VGFO15240 615 aaPredicted RBP7.1□□□□□ -1.27
GPHN-213ENST00000556501 GOLGA2Q08379 1002 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 SLFN5Q08AF3 891 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 TRMT2AQ8IZ69 625 aaKnown RBP7.1□□□□□ -1.27
GPHN-213ENST00000556501 SLC52A1Q9NWF4 448 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 TRAK1Q9UPV9 953 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 DLC1Q96QB1 1528 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 KIF13AQ9H1H9 1805 aa7.1□□□□□ -1.27
GPHN-213ENST00000556501 ALKQ9UM73 1620 aa7.09□□□□□ -1.27
GPHN-213ENST00000556501 TSPOAP1O95153 1857 aa7.09□□□□□ -1.27
GPHN-213ENST00000556501 EVC2Q86UK5 1308 aa7.09□□□□□ -1.27
GPHN-213ENST00000556501 TCERG1O14776 1098 aaKnown RBP7.09□□□□□ -1.27
GPHN-213ENST00000556501 DSG3P32926 999 aa7.09□□□□□ -1.27
GPHN-213ENST00000556501 CRBNQ96SW2 442 aa7.09□□□□□ -1.27
GPHN-213ENST00000556501 SPINK5Q9NQ38 1064 aaPredicted RBP7.09□□□□□ -1.27
GPHN-213ENST00000556501 MED14O60244 1454 aa7.09□□□□□ -1.27
GPHN-213ENST00000556501 CGNL1Q0VF96 1302 aa7.08□□□□□ -1.28
GPHN-213ENST00000556501 MS4A1P11836 297 aa7.08□□□□□ -1.28
GPHN-213ENST00000556501 MKRN4PQ13434 485 aaPredicted RBP7.08□□□□□ -1.28
GPHN-213ENST00000556501 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
GPHN-213ENST00000556501 YTHDC2Q9H6S0 1430 aaKnown RBP7.08□□□□□ -1.28
GPHN-213ENST00000556501 ABCC11Q96J66 1382 aa7.08□□□□□ -1.28
GPHN-213ENST00000556501 KNDC1Q76NI1 1749 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
GPHN-213ENST00000556501 NLRP1Q9C000 1473 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 VIRMAQ69YN4 1812 aaKnown RBP7.07□□□□□ -1.28
GPHN-213ENST00000556501 E9PSI1 815 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 APAF1O14727 1248 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 PLIN1O60240 522 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 CAPN15O75808 1086 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 IDI1Q13907 227 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 MORC1Q86VD1 984 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 CCDC146Q8IYE0 955 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.07□□□□□ -1.28
GPHN-213ENST00000556501 NRXN3Q9Y4C0 1643 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 ATAD2Q6PL18 1390 aa7.07□□□□□ -1.28
GPHN-213ENST00000556501 KDM2BQ8NHM5 1336 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 A2ML1A8K2U0 1454 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 CD163L1Q9NR16 1453 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 ERICH6Q7L0X2 663 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 SLC12A5Q9H2X9 1139 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 CDC42BPGQ6DT37 1551 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 A0A1W2PP64 1363 aa7.06□□□□□ -1.28
GPHN-213ENST00000556501 ANP32AP39687 249 aaKnown RBP7.05□□□□□ -1.28
GPHN-213ENST00000556501 C20orf194Q5TEA3 1177 aa7.05□□□□□ -1.28
GPHN-213ENST00000556501 RUNDC1Q96C34 613 aa7.05□□□□□ -1.28
GPHN-213ENST00000556501 NOP58Q9Y2X3 529 aaKnown RBP7.05□□□□□ -1.28
GPHN-213ENST00000556501 CYB5RLQ6IPT4 315 aa7.04□□□□□ -1.28
GPHN-213ENST00000556501 CENPQQ7L2Z9 268 aaPredicted RBP7.04□□□□□ -1.28
GPHN-213ENST00000556501 CFAP53Q96M91 514 aa7.04□□□□□ -1.28
GPHN-213ENST00000556501 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.04□□□□□ -1.28
GPHN-213ENST00000556501 ATP7BP35670 1465 aa7.04□□□□□ -1.28
GPHN-213ENST00000556501 RIMS2Q9UQ26 1411 aa7.03□□□□□ -1.28
GPHN-213ENST00000556501 CPS1P31327 1500 aa7.03□□□□□ -1.28
GPHN-213ENST00000556501 FAM69CQ0P6D2 419 aa7.03□□□□□ -1.28
GPHN-213ENST00000556501 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
GPHN-213ENST00000556501 NUTM2DQ5VT03 806 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms