RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CABP2Q9NPB3 220 aa14.86□□□□□ -0.03
LINC01550-206ENST00000556462 AMOTL2Q9Y2J4 779 aa14.86□□□□□ -0.03
LINC01550-206ENST00000556462 DIP2AQ14689 1571 aa14.85□□□□□ -0.03
LINC01550-206ENST00000556462 CPS1P31327 1500 aa14.85□□□□□ -0.03
LINC01550-206ENST00000556462 KNDC1Q76NI1 1749 aa14.85□□□□□ -0.03
LINC01550-206ENST00000556462 SLC12A5Q9H2X9 1139 aa14.85□□□□□ -0.03
LINC01550-206ENST00000556462 CDK19Q9BWU1 502 aa14.83□□□□□ -0.03
LINC01550-206ENST00000556462 PIK3R4Q99570 1358 aa14.83□□□□□ -0.04
LINC01550-206ENST00000556462 SRPK2P78362 688 aaKnown RBP14.83□□□□□ -0.04
LINC01550-206ENST00000556462 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
LINC01550-206ENST00000556462 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
LINC01550-206ENST00000556462 CARD14Q9BXL6 1004 aa14.82□□□□□ -0.04
LINC01550-206ENST00000556462 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
LINC01550-206ENST00000556462 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
LINC01550-206ENST00000556462 CCDC184Q52MB2 194 aa14.81□□□□□ -0.04
LINC01550-206ENST00000556462 AMER1Q5JTC6 1135 aaPredicted RBP14.81□□□□□ -0.04
LINC01550-206ENST00000556462 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
LINC01550-206ENST00000556462 WASLO00401 505 aaPredicted RBP14.8□□□□□ -0.04
LINC01550-206ENST00000556462 ATAD2Q6PL18 1390 aa14.8□□□□□ -0.04
LINC01550-206ENST00000556462 KTN1Q86UP2 1357 aaKnown RBP14.8□□□□□ -0.04
LINC01550-206ENST00000556462 KCNA6P17658 529 aa14.8□□□□□ -0.04
LINC01550-206ENST00000556462 RALBP1Q15311 655 aa14.8□□□□□ -0.04
LINC01550-206ENST00000556462 PTCH1Q13635 1447 aa14.79□□□□□ -0.04
LINC01550-206ENST00000556462 PARD3Q8TEW0 1356 aa14.79□□□□□ -0.04
LINC01550-206ENST00000556462 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
LINC01550-206ENST00000556462 YTHDC1Q96MU7 727 aaKnown RBP14.78□□□□□ -0.04
LINC01550-206ENST00000556462 NINLQ9Y2I6 1382 aa14.77□□□□□ -0.04
LINC01550-206ENST00000556462 XRN1Q8IZH2 1706 aaKnown RBP14.77□□□□□ -0.04
LINC01550-206ENST00000556462 HSPA2P54652 639 aa14.77□□□□□ -0.04
LINC01550-206ENST00000556462 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.77□□□□□ -0.05
LINC01550-206ENST00000556462 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.05
LINC01550-206ENST00000556462 ANKRD36BQ8N2N9 1353 aa14.76□□□□□ -0.05
LINC01550-206ENST00000556462 CABP1Q9NZU7 370 aa14.75□□□□□ -0.05
LINC01550-206ENST00000556462 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
LINC01550-206ENST00000556462 MYBBP1AQ9BQG0 1328 aaKnown RBP14.75□□□□□ -0.05
LINC01550-206ENST00000556462 CHD2O14647 1828 aaKnown RBP14.75□□□□□ -0.05
LINC01550-206ENST00000556462 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
LINC01550-206ENST00000556462 NUDT16Q96DE0 195 aaKnown RBP14.73□□□□□ -0.05
LINC01550-206ENST00000556462 NSD3Q9BZ95 1437 aa14.73□□□□□ -0.05
LINC01550-206ENST00000556462 CD163L1Q9NR16 1453 aa14.73□□□□□ -0.05
LINC01550-206ENST00000556462 ADGRB2O60241 1585 aa14.73□□□□□ -0.05
LINC01550-206ENST00000556462 A0A1W2PP64 1363 aa14.73□□□□□ -0.05
LINC01550-206ENST00000556462 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
LINC01550-206ENST00000556462 PRR36Q9H6K5 1346 aa14.72□□□□□ -0.05
LINC01550-206ENST00000556462 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
LINC01550-206ENST00000556462 NLRP13Q86W25 1043 aa14.7□□□□□ -0.06
LINC01550-206ENST00000556462 BRD4O60885 1362 aaPredicted RBP14.7□□□□□ -0.06
LINC01550-206ENST00000556462 ATP7BP35670 1465 aa14.7□□□□□ -0.06
LINC01550-206ENST00000556462 PPIP5K1Q6PFW1 1433 aa14.69□□□□□ -0.06
LINC01550-206ENST00000556462 CGNL1Q0VF96 1302 aa14.69□□□□□ -0.06
LINC01550-206ENST00000556462 HDGFL2Q7Z4V5 671 aaPredicted RBP14.69□□□□□ -0.06
LINC01550-206ENST00000556462 RBM33Q96EV2 1170 aaKnown RBP14.69□□□□□ -0.06
LINC01550-206ENST00000556462 CPSF1Q10570 1443 aaKnown RBP14.68□□□□□ -0.06
LINC01550-206ENST00000556462 NUTM2FA1L443 756 aa14.67□□□□□ -0.06
LINC01550-206ENST00000556462 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
LINC01550-206ENST00000556462 PNISRQ8TF01 805 aaKnown RBP14.67□□□□□ -0.06
LINC01550-206ENST00000556462 USP32Q8NFA0 1604 aa14.67□□□□□ -0.06
LINC01550-206ENST00000556462 NWD1Q149M9 1564 aa14.66□□□□□ -0.06
LINC01550-206ENST00000556462 FAM9BQ8IZU0 186 aa14.66□□□□□ -0.06
LINC01550-206ENST00000556462 PLEKHG3A1L390 1219 aa14.65□□□□□ -0.06
LINC01550-206ENST00000556462 FYB1O15117 783 aa14.65□□□□□ -0.06
LINC01550-206ENST00000556462 STRCQ7RTU9 1775 aa14.64□□□□□ -0.07
LINC01550-206ENST00000556462 NSD2O96028 1365 aa14.64□□□□□ -0.07
LINC01550-206ENST00000556462 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
LINC01550-206ENST00000556462 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
LINC01550-206ENST00000556462 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
LINC01550-206ENST00000556462 ADGRL3Q9HAR2 1447 aa14.63□□□□□ -0.07
LINC01550-206ENST00000556462 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
LINC01550-206ENST00000556462 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
LINC01550-206ENST00000556462 ACEP12821 1306 aa14.62□□□□□ -0.07
LINC01550-206ENST00000556462 NALCNQ8IZF0 1738 aa14.62□□□□□ -0.07
LINC01550-206ENST00000556462 ANKARQ7Z5J8 1434 aa14.62□□□□□ -0.07
LINC01550-206ENST00000556462 GGNBP2Q9H3C7 697 aa14.62□□□□□ -0.07
LINC01550-206ENST00000556462 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
LINC01550-206ENST00000556462 TOPAZ1Q8N9V7 1692 aa14.62□□□□□ -0.07
LINC01550-206ENST00000556462 EDC4Q6P2E9 1401 aaKnown RBP14.61□□□□□ -0.07
LINC01550-206ENST00000556462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
LINC01550-206ENST00000556462 PMFBP1Q8TBY8 1022 aa14.6□□□□□ -0.07
LINC01550-206ENST00000556462 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
LINC01550-206ENST00000556462 FMN2Q9NZ56 1722 aa14.59□□□□□ -0.07
LINC01550-206ENST00000556462 STRCP1A6NGW2 1772 aa14.59□□□□□ -0.07
LINC01550-206ENST00000556462 POLR3AO14802 1390 aaPredicted RBP14.59□□□□□ -0.07
LINC01550-206ENST00000556462 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
LINC01550-206ENST00000556462 RGPD8O14715 1765 aaPredicted RBP14.58□□□□□ -0.08
LINC01550-206ENST00000556462 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC01550-206ENST00000556462 C19orf44Q9H6X5 657 aa14.57□□□□□ -0.08
LINC01550-206ENST00000556462 TMEM94Q12767 1356 aa14.57□□□□□ -0.08
LINC01550-206ENST00000556462 AKAP12Q02952 1782 aa14.57□□□□□ -0.08
LINC01550-206ENST00000556462 MON2Q7Z3U7 1717 aa14.57□□□□□ -0.08
LINC01550-206ENST00000556462 USP6P35125 1406 aa14.57□□□□□ -0.08
LINC01550-206ENST00000556462 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
LINC01550-206ENST00000556462 NCOA3Q9Y6Q9 1424 aa14.56□□□□□ -0.08
LINC01550-206ENST00000556462 TTC21BQ7Z4L5 1316 aa14.56□□□□□ -0.08
LINC01550-206ENST00000556462 NME9Q86XW9 330 aa14.56□□□□□ -0.08
LINC01550-206ENST00000556462 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
LINC01550-206ENST00000556462 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
LINC01550-206ENST00000556462 MTHFSP49914 203 aa14.55□□□□□ -0.08
LINC01550-206ENST00000556462 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
LINC01550-206ENST00000556462 ZNF335Q9H4Z2 1342 aaPredicted RBP14.54□□□□□ -0.08
LINC01550-206ENST00000556462 PHF8Q9UPP1 1060 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms