RNA–Protein interactions for RNA: ENST00000556401.2

SUB1P2-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 2, humanhuman

BASIC

Gene SUB1P2, Length 297 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P2-201ENST00000556401 MYSM1Q5VVJ2 828 aa7.78□□□□□ -1.16
SUB1P2-201ENST00000556401 FAM117AQ9C073 453 aa7.78□□□□□ -1.16
SUB1P2-201ENST00000556401 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
SUB1P2-201ENST00000556401 S1PR4O95977 384 aa7.77□□□□□ -1.17
SUB1P2-201ENST00000556401 NDUFV2P19404 249 aa7.77□□□□□ -1.17
SUB1P2-201ENST00000556401 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
SUB1P2-201ENST00000556401 RETREG3Q86VR2 466 aa7.77□□□□□ -1.17
SUB1P2-201ENST00000556401 USB1Q9BQ65 265 aaKnown RBP7.77□□□□□ -1.17
SUB1P2-201ENST00000556401 RIC3Q7Z5B4 369 aa7.76□□□□□ -1.17
SUB1P2-201ENST00000556401 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
SUB1P2-201ENST00000556401 SPDYE5A6NIY4 337 aa7.75□□□□□ -1.17
SUB1P2-201ENST00000556401 RNF223E7ERA6 249 aa7.75□□□□□ -1.17
SUB1P2-201ENST00000556401 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
SUB1P2-201ENST00000556401 FAM160A2Q8N612 972 aaPredicted RBP7.75□□□□□ -1.17
SUB1P2-201ENST00000556401 ANKLE1Q8NAG6 615 aa7.75□□□□□ -1.17
SUB1P2-201ENST00000556401 C6orf229H3BNL8 230 aa7.74□□□□□ -1.17
SUB1P2-201ENST00000556401 CLK2P49760 499 aaKnown RBP7.74□□□□□ -1.17
SUB1P2-201ENST00000556401 MMP16P51512 607 aa7.74□□□□□ -1.17
SUB1P2-201ENST00000556401 MTMR2Q13614 643 aa7.74□□□□□ -1.17
SUB1P2-201ENST00000556401 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
SUB1P2-201ENST00000556401 ZBTB3Q9H5J0 574 aa7.73□□□□□ -1.17
SUB1P2-201ENST00000556401 PRDM9Q9NQV7 894 aa7.73□□□□□ -1.17
SUB1P2-201ENST00000556401 LIMD1Q9UGP4 676 aa7.73□□□□□ -1.17
SUB1P2-201ENST00000556401 DXOO77932 396 aaKnown RBP7.72□□□□□ -1.17
SUB1P2-201ENST00000556401 SKIV2LQ15477 1246 aaKnown RBP7.72□□□□□ -1.17
SUB1P2-201ENST00000556401 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
SUB1P2-201ENST00000556401 GOPCQ9HD26 462 aa7.72□□□□□ -1.17
SUB1P2-201ENST00000556401 JUNDP17535 347 aa7.71□□□□□ -1.18
SUB1P2-201ENST00000556401 PCDHB15Q9Y5E8 787 aa7.71□□□□□ -1.18
SUB1P2-201ENST00000556401 HRCP23327 699 aa7.7□□□□□ -1.18
SUB1P2-201ENST00000556401 FCF1Q9Y324 198 aaKnown RBP7.7□□□□□ -1.18
SUB1P2-201ENST00000556401 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
SUB1P2-201ENST00000556401 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
SUB1P2-201ENST00000556401 LILRB3O75022 631 aa7.69□□□□□ -1.18
SUB1P2-201ENST00000556401 DESI1Q6ICB0 168 aa7.69□□□□□ -1.18
SUB1P2-201ENST00000556401 QPCTQ16769 361 aa7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 IL27Q8NEV9 243 aa7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 PRR7Q8TB68 274 aa7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 PRKD2Q9BZL6 878 aa7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 POLR3EQ9NVU0 708 aa7.68□□□□□ -1.18
SUB1P2-201ENST00000556401 CABLES1Q8TDN4 633 aa7.67□□□□□ -1.18
SUB1P2-201ENST00000556401 CFAP99D6REC4 459 aa7.66□□□□□ -1.18
SUB1P2-201ENST00000556401 PTPRNQ16849 979 aa7.66□□□□□ -1.18
SUB1P2-201ENST00000556401 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
SUB1P2-201ENST00000556401 NUTM2BA6NNL0 878 aaPredicted RBP7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 NUTM2EB1AL46 878 aaPredicted RBP7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 SLC19A1P41440 591 aa7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 RPIAP49247 311 aa7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 NUTM2DQ5VT03 806 aaPredicted RBP7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 NUTM2AQ8IVF1 878 aaPredicted RBP7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 PCMTD1Q96MG8 357 aaPredicted RBP7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 NUDT12Q9BQG2 462 aa7.65□□□□□ -1.18
SUB1P2-201ENST00000556401 CCNYL3P0C7X3 344 aa7.64□□□□□ -1.19
SUB1P2-201ENST00000556401 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
SUB1P2-201ENST00000556401 HELBQ8NG08 1087 aaPredicted RBP7.64□□□□□ -1.19
SUB1P2-201ENST00000556401 EMID1Q96A84 441 aaPredicted RBP7.64□□□□□ -1.19
SUB1P2-201ENST00000556401 LIAT1Q6ZQX7 453 aa7.63□□□□□ -1.19
SUB1P2-201ENST00000556401 PROCA1Q8NCQ7 364 aaPredicted RBP7.63□□□□□ -1.19
SUB1P2-201ENST00000556401 RTL5Q5HYW3 569 aaPredicted RBP7.62□□□□□ -1.19
SUB1P2-201ENST00000556401 SPRYD7Q5W111 196 aa7.62□□□□□ -1.19
SUB1P2-201ENST00000556401 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
SUB1P2-201ENST00000556401 ZBTB24O43167 697 aaPredicted RBP7.61□□□□□ -1.19
SUB1P2-201ENST00000556401 CCDC24Q8N4L8 307 aa7.61□□□□□ -1.19
SUB1P2-201ENST00000556401 ATP1B4Q9UN42 357 aaPredicted RBP7.61□□□□□ -1.19
SUB1P2-201ENST00000556401 ZNF598Q86UK7 904 aaKnown RBP7.6□□□□□ -1.19
SUB1P2-201ENST00000556401 EVA1BQ9NVM1 165 aa7.6□□□□□ -1.19
SUB1P2-201ENST00000556401 F12P00748 615 aaPredicted RBP7.59□□□□□ -1.19
SUB1P2-201ENST00000556401 TRIM32Q13049 653 aa7.59□□□□□ -1.19
SUB1P2-201ENST00000556401 ZNF697Q5TEC3 545 aa7.59□□□□□ -1.19
SUB1P2-201ENST00000556401 TSC1Q92574 1164 aa7.59□□□□□ -1.19
SUB1P2-201ENST00000556401 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
SUB1P2-201ENST00000556401 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
SUB1P2-201ENST00000556401 FBXO31Q5XUX0 539 aaPredicted RBP7.58□□□□□ -1.2
SUB1P2-201ENST00000556401 PER1O15534 1290 aaPredicted RBP7.57□□□□□ -1.2
SUB1P2-201ENST00000556401 RFC5P40937 340 aa7.57□□□□□ -1.2
SUB1P2-201ENST00000556401 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
SUB1P2-201ENST00000556401 UNC93B1Q9H1C4 597 aa7.56□□□□□ -1.2
SUB1P2-201ENST00000556401 WNT7BP56706 349 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 PRR20EP86478 221 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 PRR20CP86479 221 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 PRR20DP86480 221 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 PRR20BP86481 221 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 PRR20AP86496 221 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 LAPTM4AQ15012 233 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 PTCRAQ6ISU1 281 aaPredicted RBP7.55□□□□□ -1.2
SUB1P2-201ENST00000556401 CTHP32929 405 aa7.54□□□□□ -1.2
SUB1P2-201ENST00000556401 CTDSPL2Q05D32 466 aa7.54□□□□□ -1.2
SUB1P2-201ENST00000556401 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
SUB1P2-201ENST00000556401 MAP10Q9P2G4 905 aa7.54□□□□□ -1.2
SUB1P2-201ENST00000556401 GDF9O60383 454 aa7.53□□□□□ -1.2
SUB1P2-201ENST00000556401 AP1G2O75843 785 aa7.53□□□□□ -1.2
SUB1P2-201ENST00000556401 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
SUB1P2-201ENST00000556401 WNT7AO00755 349 aa7.52□□□□□ -1.21
SUB1P2-201ENST00000556401 NRG2O14511 850 aaPredicted RBP7.52□□□□□ -1.21
SUB1P2-201ENST00000556401 ARMC2Q8NEN0 867 aa7.52□□□□□ -1.21
SUB1P2-201ENST00000556401 PKD2L1Q9P0L9 805 aa7.52□□□□□ -1.21
SUB1P2-201ENST00000556401 PDZRN3Q9UPQ7 1066 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms