RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
ATXN3-239ENST00000556315 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATXN3-239ENST00000556315 RNF40O75150 1001 aa8.45□□□□□ -1.06
ATXN3-239ENST00000556315 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
ATXN3-239ENST00000556315 BCANQ96GW7 911 aa8.45□□□□□ -1.06
ATXN3-239ENST00000556315 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
ATXN3-239ENST00000556315 P3H3Q8IVL6 736 aa8.43□□□□□ -1.06
ATXN3-239ENST00000556315 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
ATXN3-239ENST00000556315 ADGRG1Q9Y653 693 aa8.42□□□□□ -1.06
ATXN3-239ENST00000556315 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
ATXN3-239ENST00000556315 DNAJB2P25686 324 aa8.41□□□□□ -1.06
ATXN3-239ENST00000556315 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
ATXN3-239ENST00000556315 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
ATXN3-239ENST00000556315 LAPTM4AQ15012 233 aa8.4□□□□□ -1.06
ATXN3-239ENST00000556315 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
ATXN3-239ENST00000556315 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
ATXN3-239ENST00000556315 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
ATXN3-239ENST00000556315 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
ATXN3-239ENST00000556315 TMEM134Q9H6X4 195 aa8.39□□□□□ -1.07
ATXN3-239ENST00000556315 V9GY48 417 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-239ENST00000556315 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
ATXN3-239ENST00000556315 NUTM2FA1L443 756 aa8.38□□□□□ -1.07
ATXN3-239ENST00000556315 SEMA3EO15041 775 aa8.38□□□□□ -1.07
ATXN3-239ENST00000556315 ZPR1O75312 459 aa8.38□□□□□ -1.07
ATXN3-239ENST00000556315 COPS2P61201 443 aa8.38□□□□□ -1.07
ATXN3-239ENST00000556315 Q6ZNB5 142 aa8.38□□□□□ -1.07
ATXN3-239ENST00000556315 PRR14Q9BWN1 585 aa8.38□□□□□ -1.07
ATXN3-239ENST00000556315 CUL7Q14999 1698 aa8.37□□□□□ -1.07
ATXN3-239ENST00000556315 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-239ENST00000556315 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATXN3-239ENST00000556315 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
ATXN3-239ENST00000556315 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
ATXN3-239ENST00000556315 FCHSD2O94868 740 aa8.36□□□□□ -1.07
ATXN3-239ENST00000556315 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
ATXN3-239ENST00000556315 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ATXN3-239ENST00000556315 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
ATXN3-239ENST00000556315 GFRA3O60609 400 aa8.35□□□□□ -1.07
ATXN3-239ENST00000556315 FAM161AQ3B820 660 aa8.35□□□□□ -1.07
ATXN3-239ENST00000556315 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
ATXN3-239ENST00000556315 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
ATXN3-239ENST00000556315 GGCXP38435 758 aa8.34□□□□□ -1.07
ATXN3-239ENST00000556315 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.08
ATXN3-239ENST00000556315 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-239ENST00000556315 LCE2BO14633 110 aa8.33□□□□□ -1.08
ATXN3-239ENST00000556315 ACTN4O43707 911 aaKnown RBP8.33□□□□□ -1.08
ATXN3-239ENST00000556315 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
ATXN3-239ENST00000556315 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
ATXN3-239ENST00000556315 PTPRMP28827 1452 aa8.32□□□□□ -1.08
ATXN3-239ENST00000556315 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
ATXN3-239ENST00000556315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.32□□□□□ -1.08
ATXN3-239ENST00000556315 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-239ENST00000556315 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
ATXN3-239ENST00000556315 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
ATXN3-239ENST00000556315 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-239ENST00000556315 OATP04181 439 aa8.31□□□□□ -1.08
ATXN3-239ENST00000556315 SLC10A3P09131 477 aa8.31□□□□□ -1.08
ATXN3-239ENST00000556315 HIC1Q14526 733 aa8.31□□□□□ -1.08
ATXN3-239ENST00000556315 KMT5BQ4FZB7 885 aa8.31□□□□□ -1.08
ATXN3-239ENST00000556315 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
ATXN3-239ENST00000556315 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
ATXN3-239ENST00000556315 CFHP08603 1231 aa8.29□□□□□ -1.08
ATXN3-239ENST00000556315 TRAF7Q6Q0C0 670 aa8.29□□□□□ -1.08
ATXN3-239ENST00000556315 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
ATXN3-239ENST00000556315 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
ATXN3-239ENST00000556315 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
ATXN3-239ENST00000556315 SOCS7O14512 581 aa8.28□□□□□ -1.08
ATXN3-239ENST00000556315 HSPA2P54652 639 aa8.28□□□□□ -1.08
ATXN3-239ENST00000556315 RBM26Q5T8P6 1007 aaKnown RBP8.28□□□□□ -1.08
ATXN3-239ENST00000556315 METTL3Q86U44 580 aaKnown RBP8.28□□□□□ -1.08
ATXN3-239ENST00000556315 GPR37O15354 613 aa8.27□□□□□ -1.09
ATXN3-239ENST00000556315 TLL1O43897 1013 aa8.27□□□□□ -1.09
ATXN3-239ENST00000556315 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.09
ATXN3-239ENST00000556315 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-239ENST00000556315 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
ATXN3-239ENST00000556315 GNPATO15228 680 aa8.26□□□□□ -1.09
ATXN3-239ENST00000556315 FECHP22830 423 aa8.25□□□□□ -1.09
ATXN3-239ENST00000556315 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
ATXN3-239ENST00000556315 ANKLE1Q8NAG6 615 aa8.25□□□□□ -1.09
ATXN3-239ENST00000556315 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
ATXN3-239ENST00000556315 ABCA8O94911 1581 aa8.25□□□□□ -1.09
ATXN3-239ENST00000556315 ATP10BO94823 1461 aa8.25□□□□□ -1.09
ATXN3-239ENST00000556315 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ATXN3-239ENST00000556315 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
ATXN3-239ENST00000556315 PCF11O94913 1555 aaKnown RBP8.24□□□□□ -1.09
ATXN3-239ENST00000556315 NR1I2O75469 434 aa8.24□□□□□ -1.09
ATXN3-239ENST00000556315 NEO1Q92859 1461 aa8.24□□□□□ -1.09
ATXN3-239ENST00000556315 KIF21BO75037 1637 aa8.23□□□□□ -1.09
ATXN3-239ENST00000556315 ADH1BP00325 375 aa8.23□□□□□ -1.09
ATXN3-239ENST00000556315 SLC19A1P41440 591 aa8.23□□□□□ -1.09
ATXN3-239ENST00000556315 ADAMTSL3P82987 1691 aa8.23□□□□□ -1.09
ATXN3-239ENST00000556315 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
ATXN3-239ENST00000556315 S1PR4O95977 384 aa8.22□□□□□ -1.09
ATXN3-239ENST00000556315 RSPH4AQ5TD94 716 aa8.22□□□□□ -1.09
ATXN3-239ENST00000556315 TRIM67Q6ZTA4 783 aa8.22□□□□□ -1.09
ATXN3-239ENST00000556315 SCUBE3Q8IX30 993 aa8.22□□□□□ -1.09
ATXN3-239ENST00000556315 DAXXQ9UER7 740 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-239ENST00000556315 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
ATXN3-239ENST00000556315 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-239ENST00000556315 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
ATXN3-239ENST00000556315 TULP1O00294 542 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms