RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 KIAA1107Q9UPP5 1409 aa8.1□□□□□ -1.11
ATL1-208ENST00000556067 DNMT1P26358 1616 aaKnown RBP8.1□□□□□ -1.11
ATL1-208ENST00000556067 TTC37Q6PGP7 1564 aa8.1□□□□□ -1.11
ATL1-208ENST00000556067 CDC42BPAQ5VT25 1732 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 MAP3K7O43318 606 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 PTPREP23469 700 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 PTGER2P43116 358 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 EPAS1Q99814 870 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 PTPRKQ15262 1439 aa8.09□□□□□ -1.11
ATL1-208ENST00000556067 ARAP3Q8WWN8 1544 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 CCDC141Q6ZP82 1450 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 SEMA3EO15041 775 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 MLLT3P42568 568 aaPredicted RBP8.08□□□□□ -1.12
ATL1-208ENST00000556067 LSM11P83369 360 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATL1-208ENST00000556067 DMRTA1Q5VZB9 504 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 FBXW7Q969H0 707 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 NAIPQ13075 1403 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 CD109Q6YHK3 1445 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 MAPKBP1O60336 1514 aa8.08□□□□□ -1.12
ATL1-208ENST00000556067 ABCA9Q8IUA7 1624 aa8.07□□□□□ -1.12
ATL1-208ENST00000556067 FANCAO15360 1455 aa8.07□□□□□ -1.12
ATL1-208ENST00000556067 SHANK2Q9UPX8 1470 aa8.07□□□□□ -1.12
ATL1-208ENST00000556067 ARHGEF5Q12774 1597 aa8.07□□□□□ -1.12
ATL1-208ENST00000556067 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATL1-208ENST00000556067 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
ATL1-208ENST00000556067 DHX57Q6P158 1386 aaKnown RBP8.07□□□□□ -1.12
ATL1-208ENST00000556067 NCOA1Q15788 1441 aa8.06□□□□□ -1.12
ATL1-208ENST00000556067 SLC24A1O60721 1099 aa8.06□□□□□ -1.12
ATL1-208ENST00000556067 CDC42BPBQ9Y5S2 1711 aa8.06□□□□□ -1.12
ATL1-208ENST00000556067 SAMD9LQ8IVG5 1584 aa8.05□□□□□ -1.12
ATL1-208ENST00000556067 SPAG9O60271 1321 aaKnown RBP8.05□□□□□ -1.12
ATL1-208ENST00000556067 SYCP2Q9BX26 1530 aa8.05□□□□□ -1.12
ATL1-208ENST00000556067 EN1Q05925 392 aaPredicted RBP8.05□□□□□ -1.12
ATL1-208ENST00000556067 ADGRL2O95490 1459 aa8.05□□□□□ -1.12
ATL1-208ENST00000556067 MBD5Q9P267 1494 aa8.05□□□□□ -1.12
ATL1-208ENST00000556067 SCAPERQ9BY12 1400 aa8.04□□□□□ -1.12
ATL1-208ENST00000556067 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
ATL1-208ENST00000556067 TSR1Q2NL82 804 aaKnown RBP8.04□□□□□ -1.12
ATL1-208ENST00000556067 C6orf132Q5T0Z8 1188 aa8.04□□□□□ -1.12
ATL1-208ENST00000556067 KIF15Q9NS87 1388 aa8.04□□□□□ -1.12
ATL1-208ENST00000556067 ADGRL1O94910 1474 aa8.04□□□□□ -1.12
ATL1-208ENST00000556067 CFAP74Q9C0B2 1584 aa8.04□□□□□ -1.12
ATL1-208ENST00000556067 ADGBQ8N7X0 1667 aa8.04□□□□□ -1.12
ATL1-208ENST00000556067 GCC2Q8IWJ2 1684 aa8.03□□□□□ -1.12
ATL1-208ENST00000556067 OSBPP22059 807 aa8.03□□□□□ -1.12
ATL1-208ENST00000556067 SPNS2Q8IVW8 549 aa8.03□□□□□ -1.12
ATL1-208ENST00000556067 ANKRD50Q9ULJ7 1429 aa8.03□□□□□ -1.12
ATL1-208ENST00000556067 CROCC2H7BZ55 1655 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 NEO1Q92859 1461 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 COL9A1P20849 921 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 AFAP1Q8N556 730 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 MPHOSPH9Q99550 1183 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 ABCC1P33527 1531 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 RTEL1-TNFRSF6BF6WH68 1400 aa8.02□□□□□ -1.13
ATL1-208ENST00000556067 GLI2P10070 1586 aa8.01□□□□□ -1.13
ATL1-208ENST00000556067 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
ATL1-208ENST00000556067 ADGRD1Q6QNK2 874 aa8.01□□□□□ -1.13
ATL1-208ENST00000556067 TIMELESSQ9UNS1 1208 aa8.01□□□□□ -1.13
ATL1-208ENST00000556067 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
ATL1-208ENST00000556067 TEX14Q8IWB6 1497 aa8□□□□□ -1.13
ATL1-208ENST00000556067 NEUROD1Q13562 356 aa8□□□□□ -1.13
ATL1-208ENST00000556067 PROX2Q3B8N5 592 aa8□□□□□ -1.13
ATL1-208ENST00000556067 STAC3Q96MF2 364 aa8□□□□□ -1.13
ATL1-208ENST00000556067 CDHR5Q9HBB8 845 aa8□□□□□ -1.13
ATL1-208ENST00000556067 TRAPPC8Q9Y2L5 1435 aa8□□□□□ -1.13
ATL1-208ENST00000556067 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ATL1-208ENST00000556067 NUP155O75694 1391 aa7.99□□□□□ -1.13
ATL1-208ENST00000556067 ARHGEF12Q9NZN5 1544 aa7.99□□□□□ -1.13
ATL1-208ENST00000556067 TESPA1A2RU30 521 aaPredicted RBP7.99□□□□□ -1.13
ATL1-208ENST00000556067 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
ATL1-208ENST00000556067 DENND4BO75064 1496 aaPredicted RBP7.99□□□□□ -1.13
ATL1-208ENST00000556067 DUOX2Q9NRD8 1548 aa7.98□□□□□ -1.13
ATL1-208ENST00000556067 NUTM2FA1L443 756 aa7.98□□□□□ -1.13
ATL1-208ENST00000556067 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
ATL1-208ENST00000556067 VPS9D1Q9Y2B5 631 aa7.98□□□□□ -1.13
ATL1-208ENST00000556067 KANK1Q14678 1352 aa7.97□□□□□ -1.13
ATL1-208ENST00000556067 TONSLQ96HA7 1378 aa7.97□□□□□ -1.13
ATL1-208ENST00000556067 PLXNC1O60486 1568 aa7.97□□□□□ -1.13
ATL1-208ENST00000556067 ERBINQ96RT1 1412 aa7.97□□□□□ -1.13
ATL1-208ENST00000556067 TK2O00142 265 aa7.97□□□□□ -1.13
ATL1-208ENST00000556067 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
ATL1-208ENST00000556067 MAP3K4Q9Y6R4 1608 aa7.96□□□□□ -1.13
ATL1-208ENST00000556067 POGZQ7Z3K3 1410 aa7.96□□□□□ -1.13
ATL1-208ENST00000556067 MMRN1Q13201 1228 aa7.96□□□□□ -1.14
ATL1-208ENST00000556067 RBM26Q5T8P6 1007 aaKnown RBP7.96□□□□□ -1.14
ATL1-208ENST00000556067 ATP7AQ04656 1500 aa7.96□□□□□ -1.14
ATL1-208ENST00000556067 DHX29Q7Z478 1369 aaKnown RBP7.96□□□□□ -1.14
ATL1-208ENST00000556067 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
ATL1-208ENST00000556067 SIN3AQ96ST3 1273 aa7.95□□□□□ -1.14
ATL1-208ENST00000556067 KDM6BO15054 1643 aa7.95□□□□□ -1.14
ATL1-208ENST00000556067 MLH3Q9UHC1 1453 aa7.94□□□□□ -1.14
ATL1-208ENST00000556067 ZFYVE16Q7Z3T8 1539 aa7.94□□□□□ -1.14
ATL1-208ENST00000556067 TULP1O00294 542 aaPredicted RBP7.94□□□□□ -1.14
ATL1-208ENST00000556067 KIF3BO15066 747 aa7.94□□□□□ -1.14
ATL1-208ENST00000556067 SLC4A5Q9BY07 1137 aa7.94□□□□□ -1.14
ATL1-208ENST00000556067 TRIM6-TRIM34B2RNG4 842 aa7.93□□□□□ -1.14
ATL1-208ENST00000556067 HRO43593 1189 aa7.93□□□□□ -1.14
ATL1-208ENST00000556067 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms