RNA–Protein interactions for RNA: ENST00000556027.5

DDHD1-207, Transcript of DDHD domain containing 1, humanhuman

TSL 1 (best)

Gene DDHD1, Length 3,951 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDHD1-207ENST00000556027 ESPNB1AK53 854 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 CLGNO14967 610 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 TRIM66O15016 1216 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 ARID4AP29374 1257 aaPredicted RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 ANP32AP39687 249 aaKnown RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 NOP2P46087 812 aaKnown RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 KIAA1211Q6ZU35 1233 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 FAM9BQ8IZU0 186 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 TMC1Q8TDI8 760 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 CCDC94Q9BW85 323 aaPredicted RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 FAM53CQ9NYF3 392 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 HDAC5Q9UQL6 1122 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 RIOK3O14730 519 aaKnown RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 LIG1P18858 919 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 FAM193AP78312 1265 aa4.1□□□□□ -1.75
DDHD1-207ENST00000556027 DDX10Q13206 875 aaKnown RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 ZNF219Q9P2Y4 722 aaPredicted RBP4.1□□□□□ -1.75
DDHD1-207ENST00000556027 CAPN15O75808 1086 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 IRX3P78415 501 aaPredicted RBP4.09□□□□□ -1.75
DDHD1-207ENST00000556027 LONRF3Q496Y0 759 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 HSP90AB2PQ58FF8 381 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 MRRFQ96E11 262 aaKnown RBP4.09□□□□□ -1.75
DDHD1-207ENST00000556027 GTPBP4Q9BZE4 634 aaKnown RBP4.09□□□□□ -1.75
DDHD1-207ENST00000556027 FAM117AQ9C073 453 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 IVNS1ABPQ9Y6Y0 642 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 SOGA1O94964 1423 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 SH3BP5O60239 455 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 EIF3JO75822 258 aaKnown RBP4.09□□□□□ -1.75
DDHD1-207ENST00000556027 GPIHBP1Q8IV16 184 aa4.09□□□□□ -1.75
DDHD1-207ENST00000556027 NRDCO43847 1150 aa4.09□□□□□ -1.76
DDHD1-207ENST00000556027 FAM163BP0C2L3 166 aa4.09□□□□□ -1.76
DDHD1-207ENST00000556027 CASC1Q6TDU7 716 aa4.09□□□□□ -1.76
DDHD1-207ENST00000556027 CCAR1Q8IX12 1150 aaKnown RBP4.09□□□□□ -1.76
DDHD1-207ENST00000556027 TMA7Q9Y2S6 64 aaKnown RBP4.09□□□□□ -1.76
DDHD1-207ENST00000556027 ARIH1Q9Y4X5 557 aaPredicted RBP4.09□□□□□ -1.76
DDHD1-207ENST00000556027 CEP164Q9UPV0 1460 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 LETM1O95202 739 aaPredicted RBP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 ZC3H6P61129 1189 aaKnown RBP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 IGBP1P78318 339 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 POLA2Q14181 598 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 CDCA8Q53HL2 280 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 APBB1IPQ7Z5R6 666 aaPredicted RBP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 PPP1R9BQ96SB3 815 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 GOPCQ9HD26 462 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 IGSF5Q9NSI5 407 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 VPS8Q8N3P4 1428 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 POTEMA6NI47 508 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 GTF2F1P35269 517 aaKnown RBP eCLIP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 E2F4Q16254 413 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 ZNF622Q969S3 477 aaKnown RBP eCLIP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 ZNF330Q9Y3S2 320 aaPredicted RBP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 SCAPERQ9BY12 1400 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 TOP2BQ02880 1626 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 UNCXA6NJT0 531 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 ONECUT3O60422 494 aaPredicted RBP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 MS4A1P11836 297 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 ANP32BQ92688 251 aaKnown RBP4.08□□□□□ -1.76
DDHD1-207ENST00000556027 ARAP1Q96P48 1450 aa4.08□□□□□ -1.76
DDHD1-207ENST00000556027 SLFN14P0C7P3 912 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 MCM6Q14566 821 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 MAP3K1Q13233 1512 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 SMC5Q8IY18 1101 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 ATG3Q9NT62 314 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 STK26Q9P289 416 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 SUGT1Q9Y2Z0 365 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 KIAA1107Q9UPP5 1409 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 AK9Q5TCS8 1911 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 ZRANB2O95218 330 aaKnown RBP eCLIP4.07□□□□□ -1.76
DDHD1-207ENST00000556027 SEMA3FQ13275 785 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 PANK3Q9H999 370 aa4.07□□□□□ -1.76
DDHD1-207ENST00000556027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.07□□□□□ -1.763e-6■■■■■ 48.1
DDHD1-207ENST00000556027 hCG_2014768A0A024R1R8 64 aa4.06□□□□□ -1.76
DDHD1-207ENST00000556027 ZNF500O60304 480 aaPredicted RBP4.06□□□□□ -1.76
DDHD1-207ENST00000556027 FOSBP53539 338 aa4.06□□□□□ -1.76
DDHD1-207ENST00000556027 FOXD4L6Q3SYB3 417 aaPredicted RBP4.06□□□□□ -1.76
DDHD1-207ENST00000556027 FOXD4L3Q6VB84 417 aaPredicted RBP4.06□□□□□ -1.76
DDHD1-207ENST00000556027 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.06□□□□□ -1.76
DDHD1-207ENST00000556027 STK24Q9Y6E0 443 aa4.06□□□□□ -1.76
DDHD1-207ENST00000556027 SPATA31E1Q6ZUB1 1445 aa4.06□□□□□ -1.76
DDHD1-207ENST00000556027 AXDND1Q5T1B0 1012 aaPredicted RBP4.06□□□□□ -1.76
DDHD1-207ENST00000556027 SGSM3Q96HU1 749 aa4.06□□□□□ -1.76
DDHD1-207ENST00000556027 DHX29Q7Z478 1369 aaKnown RBP4.06□□□□□ -1.76
DDHD1-207ENST00000556027 C11orf91Q3C1V1 193 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 RNF217Q8TC41 542 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 CALR3Q96L12 384 aaKnown RBP4.05□□□□□ -1.76
DDHD1-207ENST00000556027 SLX1AQ9BQ83 275 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 TCERG1O14776 1098 aaKnown RBP4.05□□□□□ -1.76
DDHD1-207ENST00000556027 RAB11FIP3O75154 756 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 KRBA2Q6ZNG9 492 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 NOP9Q86U38 636 aaKnown RBP4.05□□□□□ -1.76
DDHD1-207ENST00000556027 PDLIM2Q96JY6 352 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 JADE2Q9NQC1 790 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 LRPPRCP42704 1394 aaKnown RBP4.05□□□□□ -1.76
DDHD1-207ENST00000556027 PPRC1Q5VV67 1664 aaKnown RBP4.05□□□□□ -1.76
DDHD1-207ENST00000556027 KIF21AQ7Z4S6 1674 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 NBPF20Q3BBV1 942 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 ZFYVE27Q5T4F4 411 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 NCOA1Q15788 1441 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 ATAD2BQ9ULI0 1458 aa4.05□□□□□ -1.76
DDHD1-207ENST00000556027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms