RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 AK7Q96M32 723 aa11.6□□□□□ -0.55
SUPT16H-204ENST00000555943 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-204ENST00000555943 RIMS1Q86UR5 1692 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-204ENST00000555943 ATP10AO60312 1499 aa11.59□□□□□ -0.55
SUPT16H-204ENST00000555943 LHX6Q9UPM6 363 aa11.59□□□□□ -0.55
SUPT16H-204ENST00000555943 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
SUPT16H-204ENST00000555943 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
SUPT16H-204ENST00000555943 KDM5CP41229 1560 aa11.58□□□□□ -0.55
SUPT16H-204ENST00000555943 CDC42BPBQ9Y5S2 1711 aa11.58□□□□□ -0.56
SUPT16H-204ENST00000555943 PREX2Q70Z35 1606 aa11.58□□□□□ -0.56
SUPT16H-204ENST00000555943 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-204ENST00000555943 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-204ENST00000555943 CFDP1Q9UEE9 299 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-204ENST00000555943 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-204ENST00000555943 FECHP22830 423 aa11.57□□□□□ -0.56
SUPT16H-204ENST00000555943 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
SUPT16H-204ENST00000555943 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-204ENST00000555943 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
SUPT16H-204ENST00000555943 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
SUPT16H-204ENST00000555943 SIGLEC1Q9BZZ2 1709 aa11.55□□□□□ -0.56
SUPT16H-204ENST00000555943 MAP2K5Q13163 448 aa11.55□□□□□ -0.56
SUPT16H-204ENST00000555943 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
SUPT16H-204ENST00000555943 MLH3Q9UHC1 1453 aa11.55□□□□□ -0.56
SUPT16H-204ENST00000555943 MINK1Q8N4C8 1332 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-204ENST00000555943 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 CDC42BPAQ5VT25 1732 aa11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 ABCC1P33527 1531 aa11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 ARHGEF12Q9NZN5 1544 aa11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 GPATCH8Q9UKJ3 1502 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-204ENST00000555943 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
SUPT16H-204ENST00000555943 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.56
SUPT16H-204ENST00000555943 IRF6O14896 467 aa11.52□□□□□ -0.57
SUPT16H-204ENST00000555943 TRIM66O15016 1216 aa11.52□□□□□ -0.57
SUPT16H-204ENST00000555943 CCDC102AQ96A19 550 aa11.52□□□□□ -0.57
SUPT16H-204ENST00000555943 MIA2Q96PC5 1412 aa11.52□□□□□ -0.57
SUPT16H-204ENST00000555943 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
SUPT16H-204ENST00000555943 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
SUPT16H-204ENST00000555943 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
SUPT16H-204ENST00000555943 FGD6Q6ZV73 1430 aa11.51□□□□□ -0.57
SUPT16H-204ENST00000555943 AGLP35573 1532 aa11.5□□□□□ -0.57
SUPT16H-204ENST00000555943 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
SUPT16H-204ENST00000555943 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
SUPT16H-204ENST00000555943 SETD1BQ9UPS6 1966 aaKnown RBP11.49□□□□□ -0.57
SUPT16H-204ENST00000555943 HSPA2P54652 639 aa11.49□□□□□ -0.57
SUPT16H-204ENST00000555943 MLECQ14165 292 aa11.49□□□□□ -0.57
SUPT16H-204ENST00000555943 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
SUPT16H-204ENST00000555943 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
SUPT16H-204ENST00000555943 PREX1Q8TCU6 1659 aa11.49□□□□□ -0.57
SUPT16H-204ENST00000555943 ZNF644Q9H582 1327 aaPredicted RBP11.48□□□□□ -0.57
SUPT16H-204ENST00000555943 TRAPPC8Q9Y2L5 1435 aa11.48□□□□□ -0.57
SUPT16H-204ENST00000555943 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 KIAA1107Q9UPP5 1409 aa11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 ITGAEP38570 1179 aa11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 HNRNPMP52272 730 aaKnown RBP eCLIP11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 PDE4DQ08499 809 aa11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 CERKQ8TCT0 537 aa11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
SUPT16H-204ENST00000555943 SAMD9LQ8IVG5 1584 aa11.46□□□□□ -0.57
SUPT16H-204ENST00000555943 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
SUPT16H-204ENST00000555943 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.57
SUPT16H-204ENST00000555943 CNTLNQ9NXG0 1405 aa11.45□□□□□ -0.58
SUPT16H-204ENST00000555943 TSPY4P0CV99 314 aa11.45□□□□□ -0.58
SUPT16H-204ENST00000555943 TSPY10P0CW01 314 aa11.45□□□□□ -0.58
SUPT16H-204ENST00000555943 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-204ENST00000555943 GPBP1L1Q9HC44 474 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-204ENST00000555943 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
SUPT16H-204ENST00000555943 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
SUPT16H-204ENST00000555943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
SUPT16H-204ENST00000555943 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
SUPT16H-204ENST00000555943 SYCP2Q9BX26 1530 aa11.44□□□□□ -0.58
SUPT16H-204ENST00000555943 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-204ENST00000555943 SPAG9O60271 1321 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-204ENST00000555943 ST18O60284 1047 aa11.43□□□□□ -0.58
SUPT16H-204ENST00000555943 COL9A1P20849 921 aa11.43□□□□□ -0.58
SUPT16H-204ENST00000555943 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
SUPT16H-204ENST00000555943 ATP7AQ04656 1500 aa11.42□□□□□ -0.58
SUPT16H-204ENST00000555943 MROH2AA6NES4 1674 aa11.42□□□□□ -0.58
SUPT16H-204ENST00000555943 C3P01024 1663 aa11.42□□□□□ -0.58
SUPT16H-204ENST00000555943 DISP3Q9P2K9 1392 aa11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 PTPREP23469 700 aa11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 PRSS12P56730 875 aa11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 AMHR2Q16671 573 aa11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 TMEM132AQ24JP5 1023 aa11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
SUPT16H-204ENST00000555943 KDM4CQ9H3R0 1056 aa11.4□□□□□ -0.58
SUPT16H-204ENST00000555943 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-204ENST00000555943 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
SUPT16H-204ENST00000555943 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.59
SUPT16H-204ENST00000555943 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
SUPT16H-204ENST00000555943 PLXNC1O60486 1568 aa11.39□□□□□ -0.59
SUPT16H-204ENST00000555943 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
SUPT16H-204ENST00000555943 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
SUPT16H-204ENST00000555943 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
SUPT16H-204ENST00000555943 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
SUPT16H-204ENST00000555943 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
SUPT16H-204ENST00000555943 ERBB3P21860 1342 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms