RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
LRP1-209ENST00000555941 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
LRP1-209ENST00000555941 PIK3C2GO75747 1445 aa17.06■□□□□ 0.32
LRP1-209ENST00000555941 AFF2P51816 1311 aa17.06■□□□□ 0.32
LRP1-209ENST00000555941 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
LRP1-209ENST00000555941 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
LRP1-209ENST00000555941 STK26Q9P289 416 aa17.04■□□□□ 0.32
LRP1-209ENST00000555941 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
LRP1-209ENST00000555941 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
LRP1-209ENST00000555941 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
LRP1-209ENST00000555941 C14orf93Q9H972 538 aaKnown RBP17.02■□□□□ 0.32
LRP1-209ENST00000555941 RBM6P78332 1123 aaKnown RBP17.01■□□□□ 0.31
LRP1-209ENST00000555941 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
LRP1-209ENST00000555941 WAPLQ7Z5K2 1190 aa17.01■□□□□ 0.31
LRP1-209ENST00000555941 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
LRP1-209ENST00000555941 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
LRP1-209ENST00000555941 YTHDC2Q9H6S0 1430 aaKnown RBP17.01■□□□□ 0.31
LRP1-209ENST00000555941 MYOM2P54296 1465 aa17■□□□□ 0.31
LRP1-209ENST00000555941 NRXN1Q9ULB1 1477 aa17■□□□□ 0.31
LRP1-209ENST00000555941 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
LRP1-209ENST00000555941 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
LRP1-209ENST00000555941 DHX57Q6P158 1386 aaKnown RBP16.99■□□□□ 0.31
LRP1-209ENST00000555941 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
LRP1-209ENST00000555941 UPF1Q92900 1129 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRP1-209ENST00000555941 PXDNQ92626 1479 aa16.98■□□□□ 0.31
LRP1-209ENST00000555941 FOXO3O43524 673 aa16.97■□□□□ 0.31
LRP1-209ENST00000555941 HRCP23327 699 aa16.96■□□□□ 0.31
LRP1-209ENST00000555941 FNBP4Q8N3X1 1017 aaPredicted RBP16.96■□□□□ 0.31
LRP1-209ENST00000555941 PLEKHH1Q9ULM0 1364 aa16.96■□□□□ 0.31
LRP1-209ENST00000555941 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.3
LRP1-209ENST00000555941 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
LRP1-209ENST00000555941 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
LRP1-209ENST00000555941 USP21Q9UK80 565 aa16.95■□□□□ 0.3
LRP1-209ENST00000555941 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
LRP1-209ENST00000555941 TRPC5Q9UL62 973 aaPredicted RBP16.94■□□□□ 0.3
LRP1-209ENST00000555941 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
LRP1-209ENST00000555941 RGS12O14924 1447 aa16.92■□□□□ 0.3
LRP1-209ENST00000555941 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
LRP1-209ENST00000555941 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
LRP1-209ENST00000555941 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
LRP1-209ENST00000555941 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
LRP1-209ENST00000555941 SPATA31A3Q5VYP0 1347 aa16.9■□□□□ 0.3
LRP1-209ENST00000555941 ATRNO75882 1429 aa16.89■□□□□ 0.29
LRP1-209ENST00000555941 PSME1Q06323 249 aa16.89■□□□□ 0.29
LRP1-209ENST00000555941 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.29
LRP1-209ENST00000555941 POGKQ9P215 609 aa16.89■□□□□ 0.29
LRP1-209ENST00000555941 PHF8Q9UPP1 1060 aa16.89■□□□□ 0.29
LRP1-209ENST00000555941 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
LRP1-209ENST00000555941 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
LRP1-209ENST00000555941 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
LRP1-209ENST00000555941 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
LRP1-209ENST00000555941 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
LRP1-209ENST00000555941 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
LRP1-209ENST00000555941 ATAD2Q6PL18 1390 aa16.85■□□□□ 0.29
LRP1-209ENST00000555941 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
LRP1-209ENST00000555941 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
LRP1-209ENST00000555941 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
LRP1-209ENST00000555941 TNS3Q68CZ2 1445 aa16.84■□□□□ 0.29
LRP1-209ENST00000555941 GJD4Q96KN9 370 aaPredicted RBP16.83■□□□□ 0.28
LRP1-209ENST00000555941 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.83■□□□□ 0.28
LRP1-209ENST00000555941 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.28
LRP1-209ENST00000555941 ARHGEF10O15013 1369 aa16.82■□□□□ 0.28
LRP1-209ENST00000555941 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
LRP1-209ENST00000555941 TRAK1Q9UPV9 953 aa16.82■□□□□ 0.28
LRP1-209ENST00000555941 SLIT2O94813 1529 aa16.81■□□□□ 0.28
LRP1-209ENST00000555941 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
LRP1-209ENST00000555941 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
LRP1-209ENST00000555941 CCDC125Q86Z20 511 aa16.79■□□□□ 0.28
LRP1-209ENST00000555941 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
LRP1-209ENST00000555941 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.28
LRP1-209ENST00000555941 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.28
LRP1-209ENST00000555941 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
LRP1-209ENST00000555941 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
LRP1-209ENST00000555941 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
LRP1-209ENST00000555941 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
LRP1-209ENST00000555941 NWD2Q9ULI1 1742 aa16.76■□□□□ 0.27
LRP1-209ENST00000555941 RALGAPBQ86X10 1494 aa16.75■□□□□ 0.27
LRP1-209ENST00000555941 VPS72Q15906 364 aa16.75■□□□□ 0.27
LRP1-209ENST00000555941 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
LRP1-209ENST00000555941 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
LRP1-209ENST00000555941 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
LRP1-209ENST00000555941 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
LRP1-209ENST00000555941 GLI3P10071 1580 aa16.73■□□□□ 0.27
LRP1-209ENST00000555941 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
LRP1-209ENST00000555941 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
LRP1-209ENST00000555941 ONECUT3O60422 494 aaPredicted RBP16.72■□□□□ 0.27
LRP1-209ENST00000555941 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
LRP1-209ENST00000555941 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
LRP1-209ENST00000555941 ALS2Q96Q42 1657 aa16.72■□□□□ 0.27
LRP1-209ENST00000555941 ITSN1Q15811 1721 aa16.71■□□□□ 0.27
LRP1-209ENST00000555941 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
LRP1-209ENST00000555941 EP400Q96L91 3159 aa16.7■□□□□ 0.26
LRP1-209ENST00000555941 NUDT16Q96DE0 195 aaKnown RBP16.69■□□□□ 0.26
LRP1-209ENST00000555941 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
LRP1-209ENST00000555941 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
LRP1-209ENST00000555941 CCDC9Q9Y3X0 531 aaKnown RBP16.68■□□□□ 0.26
LRP1-209ENST00000555941 ATP7BP35670 1465 aa16.67■□□□□ 0.26
LRP1-209ENST00000555941 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
LRP1-209ENST00000555941 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
LRP1-209ENST00000555941 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms