RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 MYO15BQ96JP2 1530 aa10.27□□□□□ -0.77
ATXN3-233ENST00000555816 MMP16P51512 607 aa10.26□□□□□ -0.77
ATXN3-233ENST00000555816 MYT1Q01538 1121 aa10.26□□□□□ -0.77
ATXN3-233ENST00000555816 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
ATXN3-233ENST00000555816 CCDC102AQ96A19 550 aa10.26□□□□□ -0.77
ATXN3-233ENST00000555816 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
ATXN3-233ENST00000555816 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
ATXN3-233ENST00000555816 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
ATXN3-233ENST00000555816 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
ATXN3-233ENST00000555816 RNF19BQ6ZMZ0 732 aa10.24□□□□□ -0.77
ATXN3-233ENST00000555816 FAM187AA6NFU0 413 aa10.23□□□□□ -0.77
ATXN3-233ENST00000555816 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-233ENST00000555816 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ATXN3-233ENST00000555816 HOXA2O43364 376 aa10.21□□□□□ -0.77
ATXN3-233ENST00000555816 FOXC1Q12948 553 aa10.21□□□□□ -0.77
ATXN3-233ENST00000555816 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
ATXN3-233ENST00000555816 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
ATXN3-233ENST00000555816 DXOO77932 396 aaKnown RBP10.2□□□□□ -0.78
ATXN3-233ENST00000555816 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
ATXN3-233ENST00000555816 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
ATXN3-233ENST00000555816 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
ATXN3-233ENST00000555816 BARGINQ6ZT62 677 aa10.19□□□□□ -0.78
ATXN3-233ENST00000555816 CRIPAKQ8N1N5 446 aa10.19□□□□□ -0.78
ATXN3-233ENST00000555816 AVPP01185 164 aa10.18□□□□□ -0.78
ATXN3-233ENST00000555816 WNT7AO00755 349 aa10.17□□□□□ -0.78
ATXN3-233ENST00000555816 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
ATXN3-233ENST00000555816 ZMYND10O75800 440 aa10.16□□□□□ -0.78
ATXN3-233ENST00000555816 TRIM32Q13049 653 aa10.16□□□□□ -0.78
ATXN3-233ENST00000555816 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
ATXN3-233ENST00000555816 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
ATXN3-233ENST00000555816 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
ATXN3-233ENST00000555816 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
ATXN3-233ENST00000555816 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-233ENST00000555816 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-233ENST00000555816 AMHR2Q16671 573 aa10.13□□□□□ -0.79
ATXN3-233ENST00000555816 RETREG3Q86VR2 466 aa10.13□□□□□ -0.79
ATXN3-233ENST00000555816 SNIP1Q8TAD8 396 aaKnown RBP10.13□□□□□ -0.79
ATXN3-233ENST00000555816 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
ATXN3-233ENST00000555816 TTC24A2A3L6 582 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-233ENST00000555816 JUNDP17535 347 aa10.12□□□□□ -0.79
ATXN3-233ENST00000555816 WNT7BP56706 349 aa10.12□□□□□ -0.79
ATXN3-233ENST00000555816 DIXDC1Q155Q3 683 aa10.11□□□□□ -0.79
ATXN3-233ENST00000555816 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
ATXN3-233ENST00000555816 FDX1P10109 184 aa10.1□□□□□ -0.79
ATXN3-233ENST00000555816 HLA-CQ95604 372 aa10.1□□□□□ -0.79
ATXN3-233ENST00000555816 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-233ENST00000555816 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
ATXN3-233ENST00000555816 AXIN1O15169 862 aa10.09□□□□□ -0.79
ATXN3-233ENST00000555816 GJA5P36382 358 aa10.09□□□□□ -0.79
ATXN3-233ENST00000555816 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
ATXN3-233ENST00000555816 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-233ENST00000555816 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
ATXN3-233ENST00000555816 MRGPRX2Q96LB1 330 aa10.07□□□□□ -0.8
ATXN3-233ENST00000555816 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
ATXN3-233ENST00000555816 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
ATXN3-233ENST00000555816 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATXN3-233ENST00000555816 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
ATXN3-233ENST00000555816 GUCA2AQ02747 115 aa10.05□□□□□ -0.8
ATXN3-233ENST00000555816 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
ATXN3-233ENST00000555816 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
ATXN3-233ENST00000555816 POTECB2RU33 542 aa10.04□□□□□ -0.8
ATXN3-233ENST00000555816 SMPD1P17405 629 aa10.04□□□□□ -0.8
ATXN3-233ENST00000555816 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
ATXN3-233ENST00000555816 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
ATXN3-233ENST00000555816 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
ATXN3-233ENST00000555816 MS4A1P11836 297 aa10.03□□□□□ -0.8
ATXN3-233ENST00000555816 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
ATXN3-233ENST00000555816 PTPRNQ16849 979 aa10.02□□□□□ -0.81
ATXN3-233ENST00000555816 AK7Q96M32 723 aa10.02□□□□□ -0.81
ATXN3-233ENST00000555816 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
ATXN3-233ENST00000555816 MTMR2Q13614 643 aa10.01□□□□□ -0.81
ATXN3-233ENST00000555816 BEGAINQ9BUH8 593 aa10.01□□□□□ -0.81
ATXN3-233ENST00000555816 EVA1BQ9NVM1 165 aa10.01□□□□□ -0.81
ATXN3-233ENST00000555816 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
ATXN3-233ENST00000555816 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ATXN3-233ENST00000555816 C11orf95C9JLR9 678 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-233ENST00000555816 TRIM66O15016 1216 aa9.99□□□□□ -0.81
ATXN3-233ENST00000555816 SKOR1P84550 965 aa9.99□□□□□ -0.81
ATXN3-233ENST00000555816 J3QL48 77 aa9.98□□□□□ -0.81
ATXN3-233ENST00000555816 NDUFV2P19404 249 aa9.98□□□□□ -0.81
ATXN3-233ENST00000555816 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-233ENST00000555816 SENP2Q9HC62 589 aa9.98□□□□□ -0.81
ATXN3-233ENST00000555816 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
ATXN3-233ENST00000555816 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
ATXN3-233ENST00000555816 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
ATXN3-233ENST00000555816 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
ATXN3-233ENST00000555816 SIAH2O43255 324 aa9.96□□□□□ -0.82
ATXN3-233ENST00000555816 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
ATXN3-233ENST00000555816 TREML4Q6UXN2 200 aa9.96□□□□□ -0.82
ATXN3-233ENST00000555816 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
ATXN3-233ENST00000555816 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
ATXN3-233ENST00000555816 TBC1D2Q9BYX2 928 aa9.96□□□□□ -0.82
ATXN3-233ENST00000555816 GMPR2Q9P2T1 348 aaKnown RBP9.96□□□□□ -0.82
ATXN3-233ENST00000555816 SPTLC1O15269 473 aa9.95□□□□□ -0.82
ATXN3-233ENST00000555816 RSBN1LQ6PCB5 846 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-233ENST00000555816 MPNDQ8N594 471 aa9.95□□□□□ -0.82
ATXN3-233ENST00000555816 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
ATXN3-233ENST00000555816 ALDH1A1P00352 501 aa9.94□□□□□ -0.82
ATXN3-233ENST00000555816 HPS1Q92902 700 aa9.94□□□□□ -0.82
ATXN3-233ENST00000555816 ATP13A2Q9NQ11 1180 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms