RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 ELL2O00472 640 aaPredicted RBP22.47■■□□□ 1.19
RCCD1-204ENST00000555737 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
RCCD1-204ENST00000555737 KANK1Q14678 1352 aa22.46■■□□□ 1.19
RCCD1-204ENST00000555737 TRAK2O60296 914 aa22.46■■□□□ 1.19
RCCD1-204ENST00000555737 MYH16Q9H6N6 1097 aa22.46■■□□□ 1.19
RCCD1-204ENST00000555737 PREX2Q70Z35 1606 aa22.45■■□□□ 1.18
RCCD1-204ENST00000555737 DUOX2Q9NRD8 1548 aa22.44■■□□□ 1.18
RCCD1-204ENST00000555737 FBLN1P23142 703 aa22.44■■□□□ 1.18
RCCD1-204ENST00000555737 HSCBQ8IWL3 235 aa22.44■■□□□ 1.18
RCCD1-204ENST00000555737 C1orf115Q9H7X2 142 aa22.44■■□□□ 1.18
RCCD1-204ENST00000555737 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
RCCD1-204ENST00000555737 SCAPERQ9BY12 1400 aa22.44■■□□□ 1.18
RCCD1-204ENST00000555737 SSH1Q8WYL5 1049 aa22.43■■□□□ 1.18
RCCD1-204ENST00000555737 NOB1Q9ULX3 412 aaKnown RBP22.43■■□□□ 1.18
RCCD1-204ENST00000555737 TRIM27P14373 513 aa22.43■■□□□ 1.18
RCCD1-204ENST00000555737 ATP10AO60312 1499 aa22.43■■□□□ 1.18
RCCD1-204ENST00000555737 MAST1Q9Y2H9 1570 aa22.43■■□□□ 1.18
RCCD1-204ENST00000555737 SRPK2P78362 688 aaKnown RBP22.42■■□□□ 1.18
RCCD1-204ENST00000555737 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
RCCD1-204ENST00000555737 UNC13BO14795 1591 aa22.4■■□□□ 1.18
RCCD1-204ENST00000555737 HSP90AB1P08238 724 aaKnown RBP22.4■■□□□ 1.18
RCCD1-204ENST00000555737 TMEM57Q8N5G2 664 aa22.4■■□□□ 1.18
RCCD1-204ENST00000555737 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
RCCD1-204ENST00000555737 CHMP5Q9NZZ3 219 aa22.39■■□□□ 1.17
RCCD1-204ENST00000555737 IQGAP3Q86VI3 1631 aa22.39■■□□□ 1.17
RCCD1-204ENST00000555737 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
RCCD1-204ENST00000555737 MADDQ8WXG6 1647 aa22.37■■□□□ 1.17
RCCD1-204ENST00000555737 SYNMO15061 1565 aa22.37■■□□□ 1.17
RCCD1-204ENST00000555737 WDR63Q8IWG1 891 aa22.37■■□□□ 1.17
RCCD1-204ENST00000555737 RIPK4P57078 832 aa22.36■■□□□ 1.17
RCCD1-204ENST00000555737 THUMPD2Q9BTF0 503 aaKnown RBP22.36■■□□□ 1.17
RCCD1-204ENST00000555737 NOS1P29475 1434 aa22.36■■□□□ 1.17
RCCD1-204ENST00000555737 POLR3AO14802 1390 aaPredicted RBP22.35■■□□□ 1.17
RCCD1-204ENST00000555737 ANKRD45Q5TZF3 282 aa22.35■■□□□ 1.17
RCCD1-204ENST00000555737 ABCC2Q92887 1545 aa22.35■■□□□ 1.17
RCCD1-204ENST00000555737 PLCH2O75038 1416 aa22.35■■□□□ 1.17
RCCD1-204ENST00000555737 APBB1O00213 710 aa22.34■■□□□ 1.17
RCCD1-204ENST00000555737 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
RCCD1-204ENST00000555737 NPC1L1Q9UHC9 1359 aa22.33■■□□□ 1.17
RCCD1-204ENST00000555737 NLRP1Q9C000 1473 aa22.32■■□□□ 1.16
RCCD1-204ENST00000555737 MINK1Q8N4C8 1332 aaPredicted RBP22.32■■□□□ 1.16
RCCD1-204ENST00000555737 ATF7IPQ6VMQ6 1270 aa22.32■■□□□ 1.16
RCCD1-204ENST00000555737 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
RCCD1-204ENST00000555737 LAMC1P11047 1609 aa22.32■■□□□ 1.16
RCCD1-204ENST00000555737 CFAP65Q6ZU64 1925 aaKnown RBP22.32■■□□□ 1.16
RCCD1-204ENST00000555737 NCLP19338 710 aaKnown RBP22.31■■□□□ 1.16
RCCD1-204ENST00000555737 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
RCCD1-204ENST00000555737 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
RCCD1-204ENST00000555737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.31■■□□□ 1.16
RCCD1-204ENST00000555737 DDX19BQ9UMR2 479 aa22.3■■□□□ 1.16
RCCD1-204ENST00000555737 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
RCCD1-204ENST00000555737 HMOX1P09601 288 aa22.3■■□□□ 1.16
RCCD1-204ENST00000555737 TRIM44Q96DX7 344 aaPredicted RBP22.3■■□□□ 1.16
RCCD1-204ENST00000555737 PTPRTO14522 1441 aa22.28■■□□□ 1.16
RCCD1-204ENST00000555737 GRPEL1Q9HAV7 217 aa22.28■■□□□ 1.16
RCCD1-204ENST00000555737 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
RCCD1-204ENST00000555737 RNF17Q9BXT8 1623 aaKnown RBP22.27■■□□□ 1.16
RCCD1-204ENST00000555737 TNPO1Q92973 898 aaKnown RBP22.27■■□□□ 1.16
RCCD1-204ENST00000555737 IQGAP1P46940 1657 aa22.27■■□□□ 1.15
RCCD1-204ENST00000555737 SLC24A1O60721 1099 aa22.26■■□□□ 1.15
RCCD1-204ENST00000555737 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
RCCD1-204ENST00000555737 CD2BP2O95400 341 aaKnown RBP22.26■■□□□ 1.15
RCCD1-204ENST00000555737 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
RCCD1-204ENST00000555737 TRIM35Q9UPQ4 493 aa22.25■■□□□ 1.15
RCCD1-204ENST00000555737 MYOM1P52179 1685 aa22.25■■□□□ 1.15
RCCD1-204ENST00000555737 ZBTB7CA1YPR0 619 aa22.23■■□□□ 1.15
RCCD1-204ENST00000555737 GAS2L3Q86XJ1 694 aa22.23■■□□□ 1.15
RCCD1-204ENST00000555737 EVC2Q86UK5 1308 aa22.23■■□□□ 1.15
RCCD1-204ENST00000555737 TPRNQ4KMQ1 711 aa22.22■■□□□ 1.15
RCCD1-204ENST00000555737 TRPM2O94759 1503 aa22.22■■□□□ 1.15
RCCD1-204ENST00000555737 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
RCCD1-204ENST00000555737 FOXD4L5Q5VV16 416 aaPredicted RBP22.22■■□□□ 1.15
RCCD1-204ENST00000555737 FOXD4L4Q8WXT5 416 aaPredicted RBP22.22■■□□□ 1.15
RCCD1-204ENST00000555737 MRE11P49959 708 aa22.22■■□□□ 1.15
RCCD1-204ENST00000555737 CHD1LQ86WJ1 897 aa22.21■■□□□ 1.15
RCCD1-204ENST00000555737 PHF23Q9BUL5 403 aaPredicted RBP22.21■■□□□ 1.15
RCCD1-204ENST00000555737 FSD2A1L4K1 749 aa22.2■■□□□ 1.14
RCCD1-204ENST00000555737 DDX11L8A8MPP1 907 aa22.2■■□□□ 1.14
RCCD1-204ENST00000555737 C14orf93Q9H972 538 aaKnown RBP22.2■■□□□ 1.14
RCCD1-204ENST00000555737 SSFA2P28290 1259 aa22.19■■□□□ 1.14
RCCD1-204ENST00000555737 ERBB4Q15303 1308 aa22.18■■□□□ 1.14
RCCD1-204ENST00000555737 PRKAR2BP31323 418 aa22.18■■□□□ 1.14
RCCD1-204ENST00000555737 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
RCCD1-204ENST00000555737 IPO8O15397 1037 aaKnown RBP22.18■■□□□ 1.14
RCCD1-204ENST00000555737 VSIG10Q8N0Z9 540 aa22.18■■□□□ 1.14
RCCD1-204ENST00000555737 TSPYL6Q8N831 410 aa22.18■■□□□ 1.14
RCCD1-204ENST00000555737 ARID3AQ99856 593 aa22.18■■□□□ 1.14
RCCD1-204ENST00000555737 DIAPH1O60610 1272 aaKnown RBP22.17■■□□□ 1.14
RCCD1-204ENST00000555737 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
RCCD1-204ENST00000555737 ESPNB1AK53 854 aa22.17■■□□□ 1.14
RCCD1-204ENST00000555737 HDAC1Q13547 482 aaPredicted RBP22.16■■□□□ 1.14
RCCD1-204ENST00000555737 CCDC27Q2M243 656 aa22.16■■□□□ 1.14
RCCD1-204ENST00000555737 AAMPQ13685 434 aa22.16■■□□□ 1.14
RCCD1-204ENST00000555737 SMC5Q8IY18 1101 aa22.16■■□□□ 1.14
RCCD1-204ENST00000555737 GBP4Q96PP9 640 aa22.16■■□□□ 1.14
RCCD1-204ENST00000555737 CEP152O94986 1710 aa22.16■■□□□ 1.14
RCCD1-204ENST00000555737 HSP90AA2PQ14568 343 aaPredicted RBP22.15■■□□□ 1.14
RCCD1-204ENST00000555737 DDX49Q9Y6V7 483 aaKnown RBP22.15■■□□□ 1.14
RCCD1-204ENST00000555737 PKNOX2Q96KN3 472 aa22.14■■□□□ 1.14
RCCD1-204ENST00000555737 SPHKAPQ2M3C7 1700 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms