RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
PRKCH-218ENST00000555628 E9PCH4 1651 aa14.41□□□□□ -0.1
PRKCH-218ENST00000555628 TRPM2O94759 1503 aa14.41□□□□□ -0.1
PRKCH-218ENST00000555628 RXRBP28702 533 aa14.4□□□□□ -0.1
PRKCH-218ENST00000555628 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
PRKCH-218ENST00000555628 MST1RQ04912 1400 aa14.4□□□□□ -0.1
PRKCH-218ENST00000555628 LAMC1P11047 1609 aa14.39□□□□□ -0.11
PRKCH-218ENST00000555628 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
PRKCH-218ENST00000555628 MEX3CQ5U5Q3 659 aaKnown RBP14.38□□□□□ -0.11
PRKCH-218ENST00000555628 ANKRD50Q9ULJ7 1429 aa14.38□□□□□ -0.11
PRKCH-218ENST00000555628 SETBP1Q9Y6X0 1596 aa14.38□□□□□ -0.11
PRKCH-218ENST00000555628 AFF2P51816 1311 aa14.38□□□□□ -0.11
PRKCH-218ENST00000555628 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
PRKCH-218ENST00000555628 IQGAP3Q86VI3 1631 aa14.36□□□□□ -0.11
PRKCH-218ENST00000555628 PNPLA6Q8IY17 1366 aa14.35□□□□□ -0.11
PRKCH-218ENST00000555628 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
PRKCH-218ENST00000555628 NALCNQ8IZF0 1738 aa14.35□□□□□ -0.11
PRKCH-218ENST00000555628 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
PRKCH-218ENST00000555628 ATF3P18847 181 aa14.34□□□□□ -0.11
PRKCH-218ENST00000555628 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRKCH-218ENST00000555628 BCANQ96GW7 911 aa14.34□□□□□ -0.11
PRKCH-218ENST00000555628 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
PRKCH-218ENST00000555628 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
PRKCH-218ENST00000555628 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-218ENST00000555628 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-218ENST00000555628 HDGFP51858 240 aaKnown RBP14.31□□□□□ -0.12
PRKCH-218ENST00000555628 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-218ENST00000555628 AMOTL2Q9Y2J4 779 aa14.31□□□□□ -0.12
PRKCH-218ENST00000555628 RBM6P78332 1123 aaKnown RBP14.3□□□□□ -0.12
PRKCH-218ENST00000555628 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
PRKCH-218ENST00000555628 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
PRKCH-218ENST00000555628 LOC105371045A0A1W2PR82 267 aa14.28□□□□□ -0.12
PRKCH-218ENST00000555628 METP08581 1390 aa14.28□□□□□ -0.12
PRKCH-218ENST00000555628 COL22A1Q8NFW1 1626 aaPredicted RBP14.28□□□□□ -0.12
PRKCH-218ENST00000555628 QTRT2Q9H974 415 aaKnown RBP14.27□□□□□ -0.13
PRKCH-218ENST00000555628 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
PRKCH-218ENST00000555628 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
PRKCH-218ENST00000555628 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
PRKCH-218ENST00000555628 DDX17Q92841 729 aaKnown RBP14.26□□□□□ -0.13
PRKCH-218ENST00000555628 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
PRKCH-218ENST00000555628 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
PRKCH-218ENST00000555628 ATRNO75882 1429 aa14.25□□□□□ -0.13
PRKCH-218ENST00000555628 SPHKAPQ2M3C7 1700 aa14.25□□□□□ -0.13
PRKCH-218ENST00000555628 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
PRKCH-218ENST00000555628 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
PRKCH-218ENST00000555628 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
PRKCH-218ENST00000555628 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
PRKCH-218ENST00000555628 ROCK1Q13464 1354 aa14.23□□□□□ -0.13
PRKCH-218ENST00000555628 SOS2Q07890 1332 aaPredicted RBP14.23□□□□□ -0.13
PRKCH-218ENST00000555628 MYOM2P54296 1465 aa14.23□□□□□ -0.13
PRKCH-218ENST00000555628 PTCH1Q13635 1447 aa14.23□□□□□ -0.13
PRKCH-218ENST00000555628 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
PRKCH-218ENST00000555628 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
PRKCH-218ENST00000555628 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
PRKCH-218ENST00000555628 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.14
PRKCH-218ENST00000555628 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
PRKCH-218ENST00000555628 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
PRKCH-218ENST00000555628 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.18□□□□□ -0.14
PRKCH-218ENST00000555628 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
PRKCH-218ENST00000555628 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
PRKCH-218ENST00000555628 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
PRKCH-218ENST00000555628 PXDNQ92626 1479 aa14.17□□□□□ -0.14
PRKCH-218ENST00000555628 LRP5O75197 1615 aa14.16□□□□□ -0.14
PRKCH-218ENST00000555628 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
PRKCH-218ENST00000555628 USP21Q9UK80 565 aa14.16□□□□□ -0.14
PRKCH-218ENST00000555628 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
PRKCH-218ENST00000555628 GLI3P10071 1580 aa14.16□□□□□ -0.14
PRKCH-218ENST00000555628 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
PRKCH-218ENST00000555628 NUP155O75694 1391 aa14.15□□□□□ -0.14
PRKCH-218ENST00000555628 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
PRKCH-218ENST00000555628 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
PRKCH-218ENST00000555628 CCDC125Q86Z20 511 aa14.12□□□□□ -0.15
PRKCH-218ENST00000555628 SLIT2O94813 1529 aa14.11□□□□□ -0.15
PRKCH-218ENST00000555628 BRWD3Q6RI45 1802 aa14.11□□□□□ -0.15
PRKCH-218ENST00000555628 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
PRKCH-218ENST00000555628 BLMP54132 1417 aaPredicted RBP14.1□□□□□ -0.15
PRKCH-218ENST00000555628 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
PRKCH-218ENST00000555628 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
PRKCH-218ENST00000555628 RALGAPBQ86X10 1494 aa14.1□□□□□ -0.15
PRKCH-218ENST00000555628 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
PRKCH-218ENST00000555628 KIF1BO60333 1816 aa14.09□□□□□ -0.15
PRKCH-218ENST00000555628 NUBP1P53384 320 aa14.09□□□□□ -0.15
PRKCH-218ENST00000555628 GABBR2O75899 941 aa14.08□□□□□ -0.16
PRKCH-218ENST00000555628 PPLO60437 1756 aa14.07□□□□□ -0.16
PRKCH-218ENST00000555628 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
PRKCH-218ENST00000555628 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
PRKCH-218ENST00000555628 USP32Q8NFA0 1604 aa14.07□□□□□ -0.16
PRKCH-218ENST00000555628 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
PRKCH-218ENST00000555628 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
PRKCH-218ENST00000555628 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
PRKCH-218ENST00000555628 TECPR2O15040 1411 aa14.05□□□□□ -0.16
PRKCH-218ENST00000555628 PHF12Q96QT6 1004 aa14.04□□□□□ -0.16
PRKCH-218ENST00000555628 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
PRKCH-218ENST00000555628 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
PRKCH-218ENST00000555628 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
PRKCH-218ENST00000555628 FMN2Q9NZ56 1722 aa14.03□□□□□ -0.16
PRKCH-218ENST00000555628 KNDC1Q76NI1 1749 aa14.02□□□□□ -0.16
PRKCH-218ENST00000555628 NWD2Q9ULI1 1742 aa14.02□□□□□ -0.16
PRKCH-218ENST00000555628 PLCH1Q4KWH8 1693 aa14.02□□□□□ -0.16
PRKCH-218ENST00000555628 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms