RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 POGKQ9P215 609 aa13.38□□□□□ -0.27
HNRNPC-220ENST00000555585 SAFB2Q14151 953 aaKnown RBP eCLIP13.37□□□□□ -0.27
HNRNPC-220ENST00000555585 CDCA8Q53HL2 280 aa13.37□□□□□ -0.27
HNRNPC-220ENST00000555585 DIP2AQ14689 1571 aa13.37□□□□□ -0.27
HNRNPC-220ENST00000555585 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
HNRNPC-220ENST00000555585 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
HNRNPC-220ENST00000555585 PRAM1Q96QH2 718 aa13.36□□□□□ -0.27
HNRNPC-220ENST00000555585 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
HNRNPC-220ENST00000555585 MED14O60244 1454 aa13.36□□□□□ -0.27
HNRNPC-220ENST00000555585 ABCC11Q96J66 1382 aa13.35□□□□□ -0.27
HNRNPC-220ENST00000555585 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
HNRNPC-220ENST00000555585 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-220ENST00000555585 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
HNRNPC-220ENST00000555585 NPHP4O75161 1426 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-220ENST00000555585 MIER1Q8N108 512 aa13.33□□□□□ -0.28
HNRNPC-220ENST00000555585 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-220ENST00000555585 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
HNRNPC-220ENST00000555585 CPS1P31327 1500 aa13.32□□□□□ -0.28
HNRNPC-220ENST00000555585 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
HNRNPC-220ENST00000555585 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
HNRNPC-220ENST00000555585 ANP32CO43423 234 aa13.31□□□□□ -0.28
HNRNPC-220ENST00000555585 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
HNRNPC-220ENST00000555585 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
HNRNPC-220ENST00000555585 TECPR2O15040 1411 aa13.3□□□□□ -0.28
HNRNPC-220ENST00000555585 ABCB7O75027 752 aa13.3□□□□□ -0.28
HNRNPC-220ENST00000555585 HSPA2P54652 639 aa13.3□□□□□ -0.28
HNRNPC-220ENST00000555585 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
HNRNPC-220ENST00000555585 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
HNRNPC-220ENST00000555585 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
HNRNPC-220ENST00000555585 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
HNRNPC-220ENST00000555585 CHD2O14647 1828 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-220ENST00000555585 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-220ENST00000555585 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
HNRNPC-220ENST00000555585 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
HNRNPC-220ENST00000555585 MYOM1P52179 1685 aa13.28□□□□□ -0.28
HNRNPC-220ENST00000555585 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.28
HNRNPC-220ENST00000555585 PANK3Q9H999 370 aa13.27□□□□□ -0.29
HNRNPC-220ENST00000555585 CABP2Q9NPB3 220 aa13.27□□□□□ -0.29
HNRNPC-220ENST00000555585 TMC1Q8TDI8 760 aa13.26□□□□□ -0.29
HNRNPC-220ENST00000555585 PUS7Q96PZ0 661 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-220ENST00000555585 CDK19Q9BWU1 502 aa13.26□□□□□ -0.29
HNRNPC-220ENST00000555585 PTCH1Q13635 1447 aa13.25□□□□□ -0.29
HNRNPC-220ENST00000555585 KCNA6P17658 529 aa13.24□□□□□ -0.29
HNRNPC-220ENST00000555585 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-220ENST00000555585 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-220ENST00000555585 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-220ENST00000555585 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
HNRNPC-220ENST00000555585 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
HNRNPC-220ENST00000555585 ADGRB2O60241 1585 aa13.21□□□□□ -0.29
HNRNPC-220ENST00000555585 SLC12A5Q9H2X9 1139 aa13.21□□□□□ -0.29
HNRNPC-220ENST00000555585 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
HNRNPC-220ENST00000555585 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-220ENST00000555585 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
HNRNPC-220ENST00000555585 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
HNRNPC-220ENST00000555585 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-220ENST00000555585 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
HNRNPC-220ENST00000555585 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-220ENST00000555585 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
HNRNPC-220ENST00000555585 CC2D1BQ5T0F9 858 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-220ENST00000555585 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-220ENST00000555585 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-220ENST00000555585 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 HDGFL2Q7Z4V5 671 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
HNRNPC-220ENST00000555585 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
HNRNPC-220ENST00000555585 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
HNRNPC-220ENST00000555585 RALBP1Q15311 655 aa13.15□□□□□ -0.3
HNRNPC-220ENST00000555585 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
HNRNPC-220ENST00000555585 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-220ENST00000555585 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.31
HNRNPC-220ENST00000555585 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
HNRNPC-220ENST00000555585 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
HNRNPC-220ENST00000555585 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
HNRNPC-220ENST00000555585 ATP7BP35670 1465 aa13.13□□□□□ -0.31
HNRNPC-220ENST00000555585 A0A1W2PP64 1363 aa13.13□□□□□ -0.31
HNRNPC-220ENST00000555585 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
HNRNPC-220ENST00000555585 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
HNRNPC-220ENST00000555585 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-220ENST00000555585 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
HNRNPC-220ENST00000555585 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-220ENST00000555585 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
HNRNPC-220ENST00000555585 CD163L1Q9NR16 1453 aa13.11□□□□□ -0.31
HNRNPC-220ENST00000555585 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
HNRNPC-220ENST00000555585 MYBBP1AQ9BQG0 1328 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-220ENST00000555585 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
HNRNPC-220ENST00000555585 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
HNRNPC-220ENST00000555585 AKAP12Q02952 1782 aa13.1□□□□□ -0.31
HNRNPC-220ENST00000555585 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
HNRNPC-220ENST00000555585 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
HNRNPC-220ENST00000555585 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-220ENST00000555585 MRS2Q9HD23 443 aa13.09□□□□□ -0.31
HNRNPC-220ENST00000555585 TMEM94Q12767 1356 aa13.08□□□□□ -0.31
HNRNPC-220ENST00000555585 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
HNRNPC-220ENST00000555585 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-220ENST00000555585 KIF20BQ96Q89 1820 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms