RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 SOX11P35716 441 aa11.19□□□□□ -0.62
PAX3-210ENST00000555548 ATG7O95352 703 aa11.18□□□□□ -0.62
PAX3-210ENST00000555548 LMOD1P29536 600 aaPredicted RBP11.18□□□□□ -0.62
PAX3-210ENST00000555548 MTMR2Q13614 643 aa11.18□□□□□ -0.62
PAX3-210ENST00000555548 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
PAX3-210ENST00000555548 UCN2Q96RP3 112 aa11.18□□□□□ -0.62
PAX3-210ENST00000555548 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
PAX3-210ENST00000555548 VRTNQ9H8Y1 702 aa11.17□□□□□ -0.62
PAX3-210ENST00000555548 CARNS1A5YM72 827 aa11.16□□□□□ -0.62
PAX3-210ENST00000555548 GUCA2AQ02747 115 aa11.16□□□□□ -0.62
PAX3-210ENST00000555548 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
PAX3-210ENST00000555548 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
PAX3-210ENST00000555548 SMAPO00193 183 aa11.15□□□□□ -0.62
PAX3-210ENST00000555548 HLA-CQ95604 372 aa11.15□□□□□ -0.62
PAX3-210ENST00000555548 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
PAX3-210ENST00000555548 E9PSI1 815 aa11.14□□□□□ -0.63
PAX3-210ENST00000555548 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
PAX3-210ENST00000555548 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
PAX3-210ENST00000555548 SND1Q7KZF4 910 aaKnown RBP eCLIP11.14□□□□□ -0.63
PAX3-210ENST00000555548 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
PAX3-210ENST00000555548 AMOTL2Q9Y2J4 779 aa11.14□□□□□ -0.63
PAX3-210ENST00000555548 SLC10A3P09131 477 aa11.13□□□□□ -0.63
PAX3-210ENST00000555548 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
PAX3-210ENST00000555548 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
PAX3-210ENST00000555548 TSC1Q92574 1164 aa11.11□□□□□ -0.63
PAX3-210ENST00000555548 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
PAX3-210ENST00000555548 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
PAX3-210ENST00000555548 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
PAX3-210ENST00000555548 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
PAX3-210ENST00000555548 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
PAX3-210ENST00000555548 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
PAX3-210ENST00000555548 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
PAX3-210ENST00000555548 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
PAX3-210ENST00000555548 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
PAX3-210ENST00000555548 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
PAX3-210ENST00000555548 ATP9BO43861 1147 aa11.06□□□□□ -0.64
PAX3-210ENST00000555548 NR6A1Q15406 480 aa11.06□□□□□ -0.64
PAX3-210ENST00000555548 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
PAX3-210ENST00000555548 KIAA1468Q9P260 1216 aa11.06□□□□□ -0.64
PAX3-210ENST00000555548 EIF4G2P78344 907 aaKnown RBP eCLIP11.05□□□□□ -0.64
PAX3-210ENST00000555548 ELOAQ14241 798 aaKnown RBP11.04□□□□□ -0.64
PAX3-210ENST00000555548 FUT2Q10981 343 aa11.03□□□□□ -0.64
PAX3-210ENST00000555548 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
PAX3-210ENST00000555548 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
PAX3-210ENST00000555548 ZBED2Q9BTP6 218 aa11.02□□□□□ -0.65
PAX3-210ENST00000555548 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
PAX3-210ENST00000555548 IGSF3O75054 1194 aa11□□□□□ -0.65
PAX3-210ENST00000555548 SLC4A3P48751 1232 aa11□□□□□ -0.65
PAX3-210ENST00000555548 NR1H3Q13133 447 aa11□□□□□ -0.65
PAX3-210ENST00000555548 NFATC2IPQ8NCF5 419 aa11□□□□□ -0.65
PAX3-210ENST00000555548 SYMPKQ92797 1274 aaKnown RBP11□□□□□ -0.65
PAX3-210ENST00000555548 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
PAX3-210ENST00000555548 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
PAX3-210ENST00000555548 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
PAX3-210ENST00000555548 LOC105371045A0A1W2PR82 267 aa10.98□□□□□ -0.65
PAX3-210ENST00000555548 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
PAX3-210ENST00000555548 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
PAX3-210ENST00000555548 CFHP08603 1231 aa10.97□□□□□ -0.65
PAX3-210ENST00000555548 RABGEF1Q9UJ41 708 aa10.97□□□□□ -0.65
PAX3-210ENST00000555548 ZMIZ1Q9ULJ6 1067 aa10.97□□□□□ -0.65
PAX3-210ENST00000555548 TMEM164Q5U3C3 297 aa10.96□□□□□ -0.65
PAX3-210ENST00000555548 TXNDC2Q86VQ3 553 aa10.96□□□□□ -0.65
PAX3-210ENST00000555548 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.65
PAX3-210ENST00000555548 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
PAX3-210ENST00000555548 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
PAX3-210ENST00000555548 PIK3CDO00329 1044 aa10.94□□□□□ -0.66
PAX3-210ENST00000555548 HOXB1P14653 301 aaPredicted RBP10.94□□□□□ -0.66
PAX3-210ENST00000555548 PHLDB3Q6NSJ2 640 aa10.94□□□□□ -0.66
PAX3-210ENST00000555548 LYPD8Q6UX82 237 aa10.94□□□□□ -0.66
PAX3-210ENST00000555548 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
PAX3-210ENST00000555548 SEPT9Q9UHD8 586 aaPredicted RBP10.94□□□□□ -0.66
PAX3-210ENST00000555548 USP17L3A6NCW0 530 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 USP17L4A6NCW7 530 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 FAM98CQ17RN3 349 aaKnown RBP10.93□□□□□ -0.66
PAX3-210ENST00000555548 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 USP17L1Q7RTZ2 530 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
PAX3-210ENST00000555548 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
PAX3-210ENST00000555548 RBM47A0AV96 593 aaKnown RBP10.91□□□□□ -0.66
PAX3-210ENST00000555548 Q3C1V9 767 aa10.91□□□□□ -0.66
PAX3-210ENST00000555548 USP17L5A8MUK1 530 aa10.9□□□□□ -0.66
PAX3-210ENST00000555548 MORN1Q5T089 497 aa10.9□□□□□ -0.66
PAX3-210ENST00000555548 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
PAX3-210ENST00000555548 UNCXA6NJT0 531 aa10.89□□□□□ -0.67
PAX3-210ENST00000555548 FAM196BA6NMK8 535 aa10.89□□□□□ -0.67
PAX3-210ENST00000555548 SKIP12755 728 aa10.89□□□□□ -0.67
PAX3-210ENST00000555548 ARID4AP29374 1257 aaPredicted RBP10.89□□□□□ -0.67
PAX3-210ENST00000555548 KMT5BQ4FZB7 885 aa10.89□□□□□ -0.67
PAX3-210ENST00000555548 FKBPLQ9UIM3 349 aa10.89□□□□□ -0.67
PAX3-210ENST00000555548 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
PAX3-210ENST00000555548 ZC3H4Q9UPT8 1303 aaKnown RBP10.88□□□□□ -0.67
PAX3-210ENST00000555548 ERCC3P19447 782 aa10.88□□□□□ -0.67
PAX3-210ENST00000555548 SSFA2P28290 1259 aa10.88□□□□□ -0.67
PAX3-210ENST00000555548 PSEN2P49810 448 aa10.88□□□□□ -0.67
PAX3-210ENST00000555548 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
PAX3-210ENST00000555548 SLC27A5Q9Y2P5 690 aa10.87□□□□□ -0.67
PAX3-210ENST00000555548 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms