RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 ABCC11Q96J66 1382 aa20■□□□□ 0.79
PTPN21-207ENST00000555243 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
PTPN21-207ENST00000555243 SOS2Q07890 1332 aaPredicted RBP20■□□□□ 0.79
PTPN21-207ENST00000555243 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
PTPN21-207ENST00000555243 ADAMTS2O95450 1211 aa19.99■□□□□ 0.79
PTPN21-207ENST00000555243 WAPLQ7Z5K2 1190 aa19.99■□□□□ 0.79
PTPN21-207ENST00000555243 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
PTPN21-207ENST00000555243 TECPR2O15040 1411 aa19.98■□□□□ 0.79
PTPN21-207ENST00000555243 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
PTPN21-207ENST00000555243 CDC42BPGQ6DT37 1551 aa19.97■□□□□ 0.79
PTPN21-207ENST00000555243 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
PTPN21-207ENST00000555243 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
PTPN21-207ENST00000555243 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
PTPN21-207ENST00000555243 C14orf93Q9H972 538 aaKnown RBP19.95■□□□□ 0.78
PTPN21-207ENST00000555243 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
PTPN21-207ENST00000555243 IFT172Q9UG01 1749 aa19.94■□□□□ 0.78
PTPN21-207ENST00000555243 FOXO3O43524 673 aa19.94■□□□□ 0.78
PTPN21-207ENST00000555243 RBM6P78332 1123 aaKnown RBP19.93■□□□□ 0.78
PTPN21-207ENST00000555243 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
PTPN21-207ENST00000555243 LAMC1P11047 1609 aa19.93■□□□□ 0.78
PTPN21-207ENST00000555243 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
PTPN21-207ENST00000555243 MYOM2P54296 1465 aa19.92■□□□□ 0.78
PTPN21-207ENST00000555243 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
PTPN21-207ENST00000555243 PLEKHH1Q9ULM0 1364 aa19.91■□□□□ 0.78
PTPN21-207ENST00000555243 XPCQ01831 940 aaPredicted RBP19.9■□□□□ 0.78
PTPN21-207ENST00000555243 USP21Q9UK80 565 aa19.9■□□□□ 0.78
PTPN21-207ENST00000555243 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
PTPN21-207ENST00000555243 POGKQ9P215 609 aa19.89■□□□□ 0.77
PTPN21-207ENST00000555243 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
PTPN21-207ENST00000555243 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
PTPN21-207ENST00000555243 NRXN1Q9ULB1 1477 aa19.87■□□□□ 0.77
PTPN21-207ENST00000555243 HRCP23327 699 aa19.87■□□□□ 0.77
PTPN21-207ENST00000555243 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
PTPN21-207ENST00000555243 SAFB2Q14151 953 aaKnown RBP eCLIP19.86■□□□□ 0.77
PTPN21-207ENST00000555243 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
PTPN21-207ENST00000555243 PSME1Q06323 249 aa19.85■□□□□ 0.77
PTPN21-207ENST00000555243 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
PTPN21-207ENST00000555243 PXDNQ92626 1479 aa19.85■□□□□ 0.77
PTPN21-207ENST00000555243 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
PTPN21-207ENST00000555243 KRT28Q7Z3Y7 464 aa19.84■□□□□ 0.77
PTPN21-207ENST00000555243 FNBP4Q8N3X1 1017 aaPredicted RBP19.84■□□□□ 0.77
PTPN21-207ENST00000555243 DCAF11Q8TEB1 546 aa19.84■□□□□ 0.77
PTPN21-207ENST00000555243 PHF8Q9UPP1 1060 aa19.84■□□□□ 0.77
PTPN21-207ENST00000555243 COL22A1Q8NFW1 1626 aaPredicted RBP19.82■□□□□ 0.76
PTPN21-207ENST00000555243 RGS12O14924 1447 aa19.82■□□□□ 0.76
PTPN21-207ENST00000555243 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
PTPN21-207ENST00000555243 KIF1AQ12756 1690 aa19.81■□□□□ 0.76
PTPN21-207ENST00000555243 SPATA31A3Q5VYP0 1347 aa19.81■□□□□ 0.76
PTPN21-207ENST00000555243 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
PTPN21-207ENST00000555243 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
PTPN21-207ENST00000555243 DLC1Q96QB1 1528 aa19.79■□□□□ 0.76
PTPN21-207ENST00000555243 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
PTPN21-207ENST00000555243 ATAD2Q6PL18 1390 aa19.76■□□□□ 0.75
PTPN21-207ENST00000555243 ATRNO75882 1429 aa19.76■□□□□ 0.75
PTPN21-207ENST00000555243 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
PTPN21-207ENST00000555243 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
PTPN21-207ENST00000555243 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
PTPN21-207ENST00000555243 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
PTPN21-207ENST00000555243 ARHGEF10O15013 1369 aa19.74■□□□□ 0.75
PTPN21-207ENST00000555243 PLEKHG5O94827 1062 aa19.74■□□□□ 0.75
PTPN21-207ENST00000555243 PMFBP1Q8TBY8 1022 aa19.74■□□□□ 0.75
PTPN21-207ENST00000555243 SRCAPQ6ZRS2 3230 aa19.74■□□□□ 0.75
PTPN21-207ENST00000555243 SBNO1A3KN83 1393 aa19.73■□□□□ 0.75
PTPN21-207ENST00000555243 ADGRB1O14514 1584 aa19.73■□□□□ 0.75
PTPN21-207ENST00000555243 GPRASP1Q5JY77 1395 aa19.72■□□□□ 0.75
PTPN21-207ENST00000555243 UNC5CLQ8IV45 518 aa19.72■□□□□ 0.75
PTPN21-207ENST00000555243 GJD4Q96KN9 370 aaPredicted RBP19.72■□□□□ 0.75
PTPN21-207ENST00000555243 BCL9LQ86UU0 1499 aa19.71■□□□□ 0.75
PTPN21-207ENST00000555243 WASLO00401 505 aaPredicted RBP19.7■□□□□ 0.74
PTPN21-207ENST00000555243 CABLES1Q8TDN4 633 aa19.69■□□□□ 0.74
PTPN21-207ENST00000555243 ADGRB2O60241 1585 aa19.69■□□□□ 0.74
PTPN21-207ENST00000555243 NGDNQ8NEJ9 315 aaKnown RBP19.68■□□□□ 0.74
PTPN21-207ENST00000555243 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
PTPN21-207ENST00000555243 MARF1Q9Y4F3 1742 aaKnown RBP19.68■□□□□ 0.74
PTPN21-207ENST00000555243 RGPD8O14715 1765 aaPredicted RBP19.67■□□□□ 0.74
PTPN21-207ENST00000555243 SLIT2O94813 1529 aa19.66■□□□□ 0.74
PTPN21-207ENST00000555243 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
PTPN21-207ENST00000555243 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
PTPN21-207ENST00000555243 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.73
PTPN21-207ENST00000555243 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
PTPN21-207ENST00000555243 CCDC125Q86Z20 511 aa19.63■□□□□ 0.73
PTPN21-207ENST00000555243 RALGAPBQ86X10 1494 aa19.62■□□□□ 0.73
PTPN21-207ENST00000555243 VPS72Q15906 364 aa19.62■□□□□ 0.73
PTPN21-207ENST00000555243 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
PTPN21-207ENST00000555243 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
PTPN21-207ENST00000555243 A0A0G2JS52 829 aa19.6■□□□□ 0.73
PTPN21-207ENST00000555243 MYT1Q01538 1121 aa19.6■□□□□ 0.73
PTPN21-207ENST00000555243 CDK19Q9BWU1 502 aa19.59■□□□□ 0.73
PTPN21-207ENST00000555243 FAM83GA6ND36 823 aa19.58■□□□□ 0.72
PTPN21-207ENST00000555243 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
PTPN21-207ENST00000555243 SF3B2Q13435 895 aaKnown RBP19.57■□□□□ 0.72
PTPN21-207ENST00000555243 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
PTPN21-207ENST00000555243 ARHGEF28Q8N1W1 1705 aaKnown RBP19.56■□□□□ 0.72
PTPN21-207ENST00000555243 GLI3P10071 1580 aa19.55■□□□□ 0.72
PTPN21-207ENST00000555243 PRDM11Q9NQV5 511 aa19.55■□□□□ 0.72
PTPN21-207ENST00000555243 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
PTPN21-207ENST00000555243 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
PTPN21-207ENST00000555243 NWD2Q9ULI1 1742 aa19.54■□□□□ 0.72
PTPN21-207ENST00000555243 ATP7BP35670 1465 aa19.54■□□□□ 0.72
PTPN21-207ENST00000555243 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms