RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
CASC1-208ENST00000555240 ZNF775Q96BV0 537 aaPredicted RBP6.81□□□□□ -1.32
CASC1-208ENST00000555240 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
CASC1-208ENST00000555240 BRICD5Q6PL45 260 aa6.8□□□□□ -1.32
CASC1-208ENST00000555240 THAP11Q96EK4 314 aa6.8□□□□□ -1.32
CASC1-208ENST00000555240 C6orf229H3BNL8 230 aa6.79□□□□□ -1.32
CASC1-208ENST00000555240 DDRGK1Q96HY6 314 aa6.79□□□□□ -1.32
CASC1-208ENST00000555240 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
CASC1-208ENST00000555240 ATP1B4Q9UN42 357 aaPredicted RBP6.79□□□□□ -1.32
CASC1-208ENST00000555240 RNF223E7ERA6 249 aa6.78□□□□□ -1.32
CASC1-208ENST00000555240 RSPH6AQ9H0K4 717 aa6.78□□□□□ -1.32
CASC1-208ENST00000555240 PPEF1O14829 653 aaPredicted RBP6.77□□□□□ -1.33
CASC1-208ENST00000555240 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
CASC1-208ENST00000555240 MSS51Q4VC12 460 aa6.77□□□□□ -1.33
CASC1-208ENST00000555240 MYSM1Q5VVJ2 828 aa6.77□□□□□ -1.33
CASC1-208ENST00000555240 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.33
CASC1-208ENST00000555240 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
CASC1-208ENST00000555240 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
CASC1-208ENST00000555240 SYMPKQ92797 1274 aaKnown RBP6.77□□□□□ -1.33
CASC1-208ENST00000555240 FAM117AQ9C073 453 aa6.77□□□□□ -1.33
CASC1-208ENST00000555240 PCDHGC3Q9UN70 934 aa6.77□□□□□ -1.33
CASC1-208ENST00000555240 V9GY48 417 aaPredicted RBP6.77□□□□□ -1.33
CASC1-208ENST00000555240 GJA5P36382 358 aa6.76□□□□□ -1.33
CASC1-208ENST00000555240 RETREG3Q86VR2 466 aa6.76□□□□□ -1.33
CASC1-208ENST00000555240 PRDM9Q9NQV7 894 aa6.76□□□□□ -1.33
CASC1-208ENST00000555240 SPTLC1O15269 473 aa6.75□□□□□ -1.33
CASC1-208ENST00000555240 BRPF1P55201 1214 aaPredicted RBP6.75□□□□□ -1.33
CASC1-208ENST00000555240 MTMR2Q13614 643 aa6.75□□□□□ -1.33
CASC1-208ENST00000555240 ANKLE1Q8NAG6 615 aa6.75□□□□□ -1.33
CASC1-208ENST00000555240 PDZRN3Q9UPQ7 1066 aa6.75□□□□□ -1.33
CASC1-208ENST00000555240 SPDYE5A6NIY4 337 aa6.74□□□□□ -1.33
CASC1-208ENST00000555240 NUTM2BA6NNL0 878 aaPredicted RBP6.74□□□□□ -1.33
CASC1-208ENST00000555240 NUTM2EB1AL46 878 aaPredicted RBP6.74□□□□□ -1.33
CASC1-208ENST00000555240 CLK2P49760 499 aaKnown RBP6.74□□□□□ -1.33
CASC1-208ENST00000555240 NUTM2DQ5VT03 806 aaPredicted RBP6.74□□□□□ -1.33
CASC1-208ENST00000555240 NUTM2AQ8IVF1 878 aaPredicted RBP6.74□□□□□ -1.33
CASC1-208ENST00000555240 ZBTB3Q9H5J0 574 aa6.74□□□□□ -1.33
CASC1-208ENST00000555240 POLR3EQ9NVU0 708 aa6.74□□□□□ -1.33
CASC1-208ENST00000555240 FCF1Q9Y324 198 aaKnown RBP6.74□□□□□ -1.33
CASC1-208ENST00000555240 PCDHB15Q9Y5E8 787 aa6.74□□□□□ -1.33
CASC1-208ENST00000555240 IL27Q8NEV9 243 aa6.73□□□□□ -1.33
CASC1-208ENST00000555240 SLC19A1P41440 591 aa6.72□□□□□ -1.33
CASC1-208ENST00000555240 MMP16P51512 607 aa6.72□□□□□ -1.33
CASC1-208ENST00000555240 SH3D19Q5HYK7 790 aa6.72□□□□□ -1.33
CASC1-208ENST00000555240 PRPF38BQ5VTL8 546 aaKnown RBP6.72□□□□□ -1.33
CASC1-208ENST00000555240 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
CASC1-208ENST00000555240 PRR7Q8TB68 274 aa6.72□□□□□ -1.33
CASC1-208ENST00000555240 LIMD1Q9UGP4 676 aa6.72□□□□□ -1.33
CASC1-208ENST00000555240 PLEKHG3A1L390 1219 aa6.71□□□□□ -1.34
CASC1-208ENST00000555240 ZBTB24O43167 697 aaPredicted RBP6.71□□□□□ -1.34
CASC1-208ENST00000555240 JUNDP17535 347 aa6.71□□□□□ -1.34
CASC1-208ENST00000555240 HRCP23327 699 aa6.71□□□□□ -1.34
CASC1-208ENST00000555240 SKIV2LQ15477 1246 aaKnown RBP6.71□□□□□ -1.34
CASC1-208ENST00000555240 TSC1Q92574 1164 aa6.71□□□□□ -1.34
CASC1-208ENST00000555240 DXOO77932 396 aaKnown RBP6.7□□□□□ -1.34
CASC1-208ENST00000555240 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
CASC1-208ENST00000555240 CABLES1Q8TDN4 633 aa6.7□□□□□ -1.34
CASC1-208ENST00000555240 QPCTQ16769 361 aa6.69□□□□□ -1.34
CASC1-208ENST00000555240 PLA2G2CQ5R387 149 aa6.69□□□□□ -1.34
CASC1-208ENST00000555240 POTECB2RU33 542 aa6.68□□□□□ -1.34
CASC1-208ENST00000555240 LILRB3O75022 631 aa6.68□□□□□ -1.34
CASC1-208ENST00000555240 TRIM67Q6ZTA4 783 aa6.68□□□□□ -1.34
CASC1-208ENST00000555240 PCMTD1Q96MG8 357 aaPredicted RBP6.68□□□□□ -1.34
CASC1-208ENST00000555240 NUDT12Q9BQG2 462 aa6.68□□□□□ -1.34
CASC1-208ENST00000555240 CFAP99D6REC4 459 aa6.67□□□□□ -1.34
CASC1-208ENST00000555240 CD2BP2O95400 341 aaKnown RBP6.67□□□□□ -1.34
CASC1-208ENST00000555240 RPIAP49247 311 aa6.67□□□□□ -1.34
CASC1-208ENST00000555240 SPRYD7Q5W111 196 aa6.67□□□□□ -1.34
CASC1-208ENST00000555240 DESI1Q6ICB0 168 aa6.67□□□□□ -1.34
CASC1-208ENST00000555240 LIAT1Q6ZQX7 453 aa6.67□□□□□ -1.34
CASC1-208ENST00000555240 PROCA1Q8NCQ7 364 aaPredicted RBP6.67□□□□□ -1.34
CASC1-208ENST00000555240 HELBQ8NG08 1087 aaPredicted RBP6.67□□□□□ -1.34
CASC1-208ENST00000555240 CCNYL3P0C7X3 344 aa6.66□□□□□ -1.34
CASC1-208ENST00000555240 PTPRNQ16849 979 aa6.66□□□□□ -1.34
CASC1-208ENST00000555240 RTL5Q5HYW3 569 aaPredicted RBP6.65□□□□□ -1.34
CASC1-208ENST00000555240 ZNF697Q5TEC3 545 aa6.65□□□□□ -1.34
CASC1-208ENST00000555240 ZNF598Q86UK7 904 aaKnown RBP6.65□□□□□ -1.34
CASC1-208ENST00000555240 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.34
CASC1-208ENST00000555240 GOPCQ9HD26 462 aa6.65□□□□□ -1.34
CASC1-208ENST00000555240 CTHP32929 405 aa6.64□□□□□ -1.35
CASC1-208ENST00000555240 MYT1Q01538 1121 aa6.64□□□□□ -1.35
CASC1-208ENST00000555240 LYPD8Q6UX82 237 aa6.64□□□□□ -1.35
CASC1-208ENST00000555240 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.64□□□□□ -1.35
CASC1-208ENST00000555240 TRIM32Q13049 653 aa6.63□□□□□ -1.35
CASC1-208ENST00000555240 EVA1BQ9NVM1 165 aa6.63□□□□□ -1.35
CASC1-208ENST00000555240 KCNH2Q12809 1159 aa6.62□□□□□ -1.35
CASC1-208ENST00000555240 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
CASC1-208ENST00000555240 AP1G2O75843 785 aa6.61□□□□□ -1.35
CASC1-208ENST00000555240 FOXC1Q12948 553 aa6.61□□□□□ -1.35
CASC1-208ENST00000555240 PTCRAQ6ISU1 281 aaPredicted RBP6.61□□□□□ -1.35
CASC1-208ENST00000555240 UNC93B1Q9H1C4 597 aa6.61□□□□□ -1.35
CASC1-208ENST00000555240 TNFRSF10AO00220 468 aa6.6□□□□□ -1.35
CASC1-208ENST00000555240 PER1O15534 1290 aaPredicted RBP6.6□□□□□ -1.35
CASC1-208ENST00000555240 CTDSPL2Q05D32 466 aa6.6□□□□□ -1.35
CASC1-208ENST00000555240 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
CASC1-208ENST00000555240 PPP2R2DQ66LE6 453 aa6.6□□□□□ -1.35
CASC1-208ENST00000555240 RFC5P40937 340 aa6.59□□□□□ -1.35
CASC1-208ENST00000555240 MAP10Q9P2G4 905 aa6.59□□□□□ -1.35
CASC1-208ENST00000555240 DGAT1O75907 488 aa6.58□□□□□ -1.36
CASC1-208ENST00000555240 FBXO31Q5XUX0 539 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms