RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 KNDC1Q76NI1 1749 aa17.93■□□□□ 0.46
SIX1-203ENST00000554986 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
SIX1-203ENST00000554986 LTBP4Q8N2S1 1624 aa17.92■□□□□ 0.46
SIX1-203ENST00000554986 WASHC2AQ641Q2 1341 aa17.92■□□□□ 0.46
SIX1-203ENST00000554986 TECPR2O15040 1411 aa17.9■□□□□ 0.46
SIX1-203ENST00000554986 ABCC11Q96J66 1382 aa17.9■□□□□ 0.46
SIX1-203ENST00000554986 ROBO2Q9HCK4 1378 aa17.9■□□□□ 0.46
SIX1-203ENST00000554986 CPS1P31327 1500 aa17.9■□□□□ 0.46
SIX1-203ENST00000554986 IPO9Q96P70 1041 aaKnown RBP17.9■□□□□ 0.46
SIX1-203ENST00000554986 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
SIX1-203ENST00000554986 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.46
SIX1-203ENST00000554986 NKTRP30414 1462 aaKnown RBP17.89■□□□□ 0.45
SIX1-203ENST00000554986 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
SIX1-203ENST00000554986 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.45
SIX1-203ENST00000554986 RBM33Q96EV2 1170 aaKnown RBP17.88■□□□□ 0.45
SIX1-203ENST00000554986 PTCH1Q13635 1447 aa17.88■□□□□ 0.45
SIX1-203ENST00000554986 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
SIX1-203ENST00000554986 XIRP1Q702N8 1843 aaKnown RBP17.87■□□□□ 0.45
SIX1-203ENST00000554986 DLC1Q96QB1 1528 aa17.87■□□□□ 0.45
SIX1-203ENST00000554986 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
SIX1-203ENST00000554986 LRRC7Q96NW7 1537 aa17.87■□□□□ 0.45
SIX1-203ENST00000554986 ANP32AP39687 249 aaKnown RBP17.86■□□□□ 0.45
SIX1-203ENST00000554986 PLEKHH1Q9ULM0 1364 aa17.86■□□□□ 0.45
SIX1-203ENST00000554986 SMG6Q86US8 1419 aaKnown RBP17.86■□□□□ 0.45
SIX1-203ENST00000554986 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
SIX1-203ENST00000554986 WAPLQ7Z5K2 1190 aa17.86■□□□□ 0.45
SIX1-203ENST00000554986 PROSER2Q86WR7 435 aaPredicted RBP17.85■□□□□ 0.45
SIX1-203ENST00000554986 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
SIX1-203ENST00000554986 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
SIX1-203ENST00000554986 NBR1Q14596 966 aa17.84■□□□□ 0.45
SIX1-203ENST00000554986 TMEM94Q12767 1356 aa17.83■□□□□ 0.45
SIX1-203ENST00000554986 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.45
SIX1-203ENST00000554986 PRAM1Q96QH2 718 aa17.83■□□□□ 0.44
SIX1-203ENST00000554986 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
SIX1-203ENST00000554986 SAFB2Q14151 953 aaKnown RBP eCLIP17.82■□□□□ 0.44
SIX1-203ENST00000554986 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
SIX1-203ENST00000554986 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
SIX1-203ENST00000554986 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
SIX1-203ENST00000554986 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
SIX1-203ENST00000554986 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
SIX1-203ENST00000554986 USP47Q96K76 1375 aa17.8■□□□□ 0.44
SIX1-203ENST00000554986 QRICH2Q9H0J4 1663 aa17.79■□□□□ 0.44
SIX1-203ENST00000554986 POGKQ9P215 609 aa17.79■□□□□ 0.44
SIX1-203ENST00000554986 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
SIX1-203ENST00000554986 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
SIX1-203ENST00000554986 CCDC184Q52MB2 194 aa17.78■□□□□ 0.44
SIX1-203ENST00000554986 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
SIX1-203ENST00000554986 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
SIX1-203ENST00000554986 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
SIX1-203ENST00000554986 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
SIX1-203ENST00000554986 ST20-MTHFSA0A0A6YYL1 179 aa17.76■□□□□ 0.43
SIX1-203ENST00000554986 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
SIX1-203ENST00000554986 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
SIX1-203ENST00000554986 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
SIX1-203ENST00000554986 C14orf37Q86TY3 774 aa17.75■□□□□ 0.43
SIX1-203ENST00000554986 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
SIX1-203ENST00000554986 ADGRB2O60241 1585 aa17.73■□□□□ 0.43
SIX1-203ENST00000554986 NUDCQ9Y266 331 aa17.73■□□□□ 0.43
SIX1-203ENST00000554986 CDC42BPGQ6DT37 1551 aa17.72■□□□□ 0.43
SIX1-203ENST00000554986 FAM9BQ8IZU0 186 aa17.71■□□□□ 0.43
SIX1-203ENST00000554986 TESK2Q96S53 571 aa17.71■□□□□ 0.43
SIX1-203ENST00000554986 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
SIX1-203ENST00000554986 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
SIX1-203ENST00000554986 MSH6P52701 1360 aa17.71■□□□□ 0.43
SIX1-203ENST00000554986 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
SIX1-203ENST00000554986 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
SIX1-203ENST00000554986 SBNO2Q9Y2G9 1366 aa17.7■□□□□ 0.42
SIX1-203ENST00000554986 IQSEC2Q5JU85 1478 aa17.7■□□□□ 0.42
SIX1-203ENST00000554986 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
SIX1-203ENST00000554986 DCCP43146 1447 aa17.68■□□□□ 0.42
SIX1-203ENST00000554986 WASLO00401 505 aaPredicted RBP17.67■□□□□ 0.42
SIX1-203ENST00000554986 RGPD8O14715 1765 aaPredicted RBP17.66■□□□□ 0.42
SIX1-203ENST00000554986 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
SIX1-203ENST00000554986 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
SIX1-203ENST00000554986 ATF3P18847 181 aa17.66■□□□□ 0.42
SIX1-203ENST00000554986 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
SIX1-203ENST00000554986 MST1RQ04912 1400 aa17.65■□□□□ 0.42
SIX1-203ENST00000554986 CADPS2Q86UW7 1296 aa17.64■□□□□ 0.41
SIX1-203ENST00000554986 IL27Q8NEV9 243 aa17.64■□□□□ 0.41
SIX1-203ENST00000554986 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
SIX1-203ENST00000554986 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
SIX1-203ENST00000554986 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
SIX1-203ENST00000554986 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
SIX1-203ENST00000554986 PPM1GO15355 546 aaPredicted RBP17.62■□□□□ 0.41
SIX1-203ENST00000554986 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
SIX1-203ENST00000554986 ATP7BP35670 1465 aa17.62■□□□□ 0.41
SIX1-203ENST00000554986 C1orf167Q5SNV9 1468 aa17.62■□□□□ 0.41
SIX1-203ENST00000554986 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
SIX1-203ENST00000554986 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
SIX1-203ENST00000554986 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
SIX1-203ENST00000554986 KIF7Q2M1P5 1343 aa17.6■□□□□ 0.41
SIX1-203ENST00000554986 MS4A1P11836 297 aa17.6■□□□□ 0.41
SIX1-203ENST00000554986 TMF1P82094 1093 aa17.6■□□□□ 0.41
SIX1-203ENST00000554986 UBE2Q2Q8WVN8 375 aa17.59■□□□□ 0.41
SIX1-203ENST00000554986 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
SIX1-203ENST00000554986 TOPAZ1Q8N9V7 1692 aa17.59■□□□□ 0.41
SIX1-203ENST00000554986 TOM1O60784 492 aa17.59■□□□□ 0.41
SIX1-203ENST00000554986 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
SIX1-203ENST00000554986 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
SIX1-203ENST00000554986 ITSN1Q15811 1721 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms