RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 ORAI2Q96SN7 254 aa17.5■□□□□ 0.39
PSMC6-207ENST00000554952 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
PSMC6-207ENST00000554952 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
PSMC6-207ENST00000554952 C1orf167Q5SNV9 1468 aa17.48■□□□□ 0.39
PSMC6-207ENST00000554952 C14orf93Q9H972 538 aaKnown RBP17.46■□□□□ 0.39
PSMC6-207ENST00000554952 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
PSMC6-207ENST00000554952 LRP6O75581 1613 aa17.45■□□□□ 0.38
PSMC6-207ENST00000554952 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
PSMC6-207ENST00000554952 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
PSMC6-207ENST00000554952 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
PSMC6-207ENST00000554952 CFAP70Q5T0N1 1121 aa17.44■□□□□ 0.38
PSMC6-207ENST00000554952 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
PSMC6-207ENST00000554952 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
PSMC6-207ENST00000554952 SHPRHQ149N8 1683 aa17.43■□□□□ 0.38
PSMC6-207ENST00000554952 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
PSMC6-207ENST00000554952 HRCP23327 699 aa17.43■□□□□ 0.38
PSMC6-207ENST00000554952 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
PSMC6-207ENST00000554952 KDM2AQ9Y2K7 1162 aa17.42■□□□□ 0.38
PSMC6-207ENST00000554952 NHSL1Q5SYE7 1610 aa17.42■□□□□ 0.38
PSMC6-207ENST00000554952 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
PSMC6-207ENST00000554952 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
PSMC6-207ENST00000554952 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
PSMC6-207ENST00000554952 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
PSMC6-207ENST00000554952 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
PSMC6-207ENST00000554952 TECPR2O15040 1411 aa17.39■□□□□ 0.38
PSMC6-207ENST00000554952 FOXO3O43524 673 aa17.39■□□□□ 0.37
PSMC6-207ENST00000554952 DCAF11Q8TEB1 546 aa17.39■□□□□ 0.37
PSMC6-207ENST00000554952 SIRT1Q96EB6 747 aa17.39■□□□□ 0.37
PSMC6-207ENST00000554952 ADAMTS2O95450 1211 aa17.38■□□□□ 0.37
PSMC6-207ENST00000554952 C8orf37Q96NL8 207 aa17.38■□□□□ 0.37
PSMC6-207ENST00000554952 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
PSMC6-207ENST00000554952 SAFB2Q14151 953 aaKnown RBP eCLIP17.37■□□□□ 0.37
PSMC6-207ENST00000554952 AFF2P51816 1311 aa17.37■□□□□ 0.37
PSMC6-207ENST00000554952 RXRBP28702 533 aa17.36■□□□□ 0.37
PSMC6-207ENST00000554952 NGLY1Q96IV0 654 aa17.36■□□□□ 0.37
PSMC6-207ENST00000554952 POGKQ9P215 609 aa17.36■□□□□ 0.37
PSMC6-207ENST00000554952 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
PSMC6-207ENST00000554952 MYOM2P54296 1465 aa17.36■□□□□ 0.37
PSMC6-207ENST00000554952 NRXN1Q9ULB1 1477 aa17.36■□□□□ 0.37
PSMC6-207ENST00000554952 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
PSMC6-207ENST00000554952 CDC42BPGQ6DT37 1551 aa17.35■□□□□ 0.37
PSMC6-207ENST00000554952 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
PSMC6-207ENST00000554952 QTRT2Q9H974 415 aaKnown RBP17.33■□□□□ 0.36
PSMC6-207ENST00000554952 STAC3Q96MF2 364 aa17.32■□□□□ 0.36
PSMC6-207ENST00000554952 TRAK1Q9UPV9 953 aa17.32■□□□□ 0.36
PSMC6-207ENST00000554952 LAMC1P11047 1609 aa17.32■□□□□ 0.36
PSMC6-207ENST00000554952 KNDC1Q76NI1 1749 aa17.31■□□□□ 0.36
PSMC6-207ENST00000554952 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
PSMC6-207ENST00000554952 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
PSMC6-207ENST00000554952 PXDNQ92626 1479 aa17.27■□□□□ 0.36
PSMC6-207ENST00000554952 RBM6P78332 1123 aaKnown RBP17.27■□□□□ 0.36
PSMC6-207ENST00000554952 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
PSMC6-207ENST00000554952 USP21Q9UK80 565 aa17.27■□□□□ 0.36
PSMC6-207ENST00000554952 FMN2Q9NZ56 1722 aa17.26■□□□□ 0.35
PSMC6-207ENST00000554952 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
PSMC6-207ENST00000554952 PSME1Q06323 249 aa17.25■□□□□ 0.35
PSMC6-207ENST00000554952 SPATA31A3Q5VYP0 1347 aa17.24■□□□□ 0.35
PSMC6-207ENST00000554952 FNBP4Q8N3X1 1017 aaPredicted RBP17.24■□□□□ 0.35
PSMC6-207ENST00000554952 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
PSMC6-207ENST00000554952 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
PSMC6-207ENST00000554952 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
PSMC6-207ENST00000554952 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
PSMC6-207ENST00000554952 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
PSMC6-207ENST00000554952 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
PSMC6-207ENST00000554952 TRPC5Q9UL62 973 aaPredicted RBP17.23■□□□□ 0.35
PSMC6-207ENST00000554952 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.35
PSMC6-207ENST00000554952 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
PSMC6-207ENST00000554952 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-207ENST00000554952 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-207ENST00000554952 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-207ENST00000554952 KIF1AQ12756 1690 aa17.2■□□□□ 0.34
PSMC6-207ENST00000554952 CABLES1Q8TDN4 633 aa17.19■□□□□ 0.34
PSMC6-207ENST00000554952 ANKARQ7Z5J8 1434 aa17.18■□□□□ 0.34
PSMC6-207ENST00000554952 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
PSMC6-207ENST00000554952 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
PSMC6-207ENST00000554952 RGS12O14924 1447 aa17.16■□□□□ 0.34
PSMC6-207ENST00000554952 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
PSMC6-207ENST00000554952 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
PSMC6-207ENST00000554952 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
PSMC6-207ENST00000554952 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
PSMC6-207ENST00000554952 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
PSMC6-207ENST00000554952 BCL9LQ86UU0 1499 aa17.14■□□□□ 0.33
PSMC6-207ENST00000554952 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
PSMC6-207ENST00000554952 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
PSMC6-207ENST00000554952 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
PSMC6-207ENST00000554952 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
PSMC6-207ENST00000554952 ATRNO75882 1429 aa17.13■□□□□ 0.33
PSMC6-207ENST00000554952 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
PSMC6-207ENST00000554952 GJD4Q96KN9 370 aaPredicted RBP17.13■□□□□ 0.33
PSMC6-207ENST00000554952 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
PSMC6-207ENST00000554952 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
PSMC6-207ENST00000554952 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
PSMC6-207ENST00000554952 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
PSMC6-207ENST00000554952 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
PSMC6-207ENST00000554952 MARF1Q9Y4F3 1742 aaKnown RBP17.11■□□□□ 0.33
PSMC6-207ENST00000554952 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
PSMC6-207ENST00000554952 TULP4Q9NRJ4 1543 aa17.1■□□□□ 0.33
PSMC6-207ENST00000554952 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
PSMC6-207ENST00000554952 ARHGEF28Q8N1W1 1705 aaKnown RBP17.08■□□□□ 0.32
PSMC6-207ENST00000554952 SLIT2O94813 1529 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms