RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
PPP4R3A-206ENST00000554943 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
PPP4R3A-206ENST00000554943 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
PPP4R3A-206ENST00000554943 ARHGEF40Q8TER5 1519 aa16.8■□□□□ 0.28
PPP4R3A-206ENST00000554943 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
PPP4R3A-206ENST00000554943 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
PPP4R3A-206ENST00000554943 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
PPP4R3A-206ENST00000554943 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
PPP4R3A-206ENST00000554943 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
PPP4R3A-206ENST00000554943 ANKRD36BQ8N2N9 1353 aa16.78■□□□□ 0.28
PPP4R3A-206ENST00000554943 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
PPP4R3A-206ENST00000554943 ABCC11Q96J66 1382 aa16.76■□□□□ 0.27
PPP4R3A-206ENST00000554943 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
PPP4R3A-206ENST00000554943 MS4A1P11836 297 aa16.75■□□□□ 0.27
PPP4R3A-206ENST00000554943 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
PPP4R3A-206ENST00000554943 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
PPP4R3A-206ENST00000554943 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
PPP4R3A-206ENST00000554943 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
PPP4R3A-206ENST00000554943 C3P01024 1663 aa16.72■□□□□ 0.27
PPP4R3A-206ENST00000554943 CPS1P31327 1500 aa16.71■□□□□ 0.27
PPP4R3A-206ENST00000554943 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.26
PPP4R3A-206ENST00000554943 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.26
PPP4R3A-206ENST00000554943 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
PPP4R3A-206ENST00000554943 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
PPP4R3A-206ENST00000554943 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
PPP4R3A-206ENST00000554943 NALCNQ8IZF0 1738 aa16.69■□□□□ 0.26
PPP4R3A-206ENST00000554943 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
PPP4R3A-206ENST00000554943 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-206ENST00000554943 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
PPP4R3A-206ENST00000554943 C20orf194Q5TEA3 1177 aa16.68■□□□□ 0.26
PPP4R3A-206ENST00000554943 GOLGA2Q08379 1002 aa16.68■□□□□ 0.26
PPP4R3A-206ENST00000554943 RIMS1Q86UR5 1692 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-206ENST00000554943 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
PPP4R3A-206ENST00000554943 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
PPP4R3A-206ENST00000554943 TECPR2O15040 1411 aa16.67■□□□□ 0.26
PPP4R3A-206ENST00000554943 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
PPP4R3A-206ENST00000554943 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
PPP4R3A-206ENST00000554943 IDI1Q13907 227 aa16.66■□□□□ 0.26
PPP4R3A-206ENST00000554943 CRBNQ96SW2 442 aa16.66■□□□□ 0.26
PPP4R3A-206ENST00000554943 ATP7BP35670 1465 aa16.66■□□□□ 0.26
PPP4R3A-206ENST00000554943 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-206ENST00000554943 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
PPP4R3A-206ENST00000554943 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
PPP4R3A-206ENST00000554943 ZMYM3Q14202 1370 aa16.63■□□□□ 0.25
PPP4R3A-206ENST00000554943 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-206ENST00000554943 RGPD1P0DJD0 1748 aa16.63■□□□□ 0.25
PPP4R3A-206ENST00000554943 E9PSI1 815 aa16.63■□□□□ 0.25
PPP4R3A-206ENST00000554943 PLIN1O60240 522 aa16.62■□□□□ 0.25
PPP4R3A-206ENST00000554943 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
PPP4R3A-206ENST00000554943 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
PPP4R3A-206ENST00000554943 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
PPP4R3A-206ENST00000554943 SLC12A5Q9H2X9 1139 aa16.61■□□□□ 0.25
PPP4R3A-206ENST00000554943 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
PPP4R3A-206ENST00000554943 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
PPP4R3A-206ENST00000554943 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
PPP4R3A-206ENST00000554943 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-206ENST00000554943 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
PPP4R3A-206ENST00000554943 GGT6Q6P531 493 aa16.59■□□□□ 0.25
PPP4R3A-206ENST00000554943 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
PPP4R3A-206ENST00000554943 CGNL1Q0VF96 1302 aa16.59■□□□□ 0.25
PPP4R3A-206ENST00000554943 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.25
PPP4R3A-206ENST00000554943 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.25
PPP4R3A-206ENST00000554943 APAF1O14727 1248 aa16.58■□□□□ 0.24
PPP4R3A-206ENST00000554943 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
PPP4R3A-206ENST00000554943 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
PPP4R3A-206ENST00000554943 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
PPP4R3A-206ENST00000554943 PDE4AP27815 886 aa16.57■□□□□ 0.24
PPP4R3A-206ENST00000554943 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
PPP4R3A-206ENST00000554943 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
PPP4R3A-206ENST00000554943 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
PPP4R3A-206ENST00000554943 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
PPP4R3A-206ENST00000554943 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
PPP4R3A-206ENST00000554943 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
PPP4R3A-206ENST00000554943 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
PPP4R3A-206ENST00000554943 NOP58Q9Y2X3 529 aaKnown RBP16.55■□□□□ 0.24
PPP4R3A-206ENST00000554943 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
PPP4R3A-206ENST00000554943 CCDC146Q8IYE0 955 aa16.54■□□□□ 0.24
PPP4R3A-206ENST00000554943 C8orf34Q49A92 452 aa16.52■□□□□ 0.24
PPP4R3A-206ENST00000554943 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
PPP4R3A-206ENST00000554943 SIRT1Q96EB6 747 aa16.52■□□□□ 0.23
PPP4R3A-206ENST00000554943 AAMPQ13685 434 aa16.51■□□□□ 0.23
PPP4R3A-206ENST00000554943 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
PPP4R3A-206ENST00000554943 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
PPP4R3A-206ENST00000554943 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-206ENST00000554943 BCAR3O75815 825 aa16.49■□□□□ 0.23
PPP4R3A-206ENST00000554943 MTHFSP49914 203 aa16.49■□□□□ 0.23
PPP4R3A-206ENST00000554943 RARSP54136 660 aaKnown RBP16.49■□□□□ 0.23
PPP4R3A-206ENST00000554943 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
PPP4R3A-206ENST00000554943 PEAK1Q9H792 1746 aa16.49■□□□□ 0.23
PPP4R3A-206ENST00000554943 IL16Q14005 1332 aa16.48■□□□□ 0.23
PPP4R3A-206ENST00000554943 FYB1O15117 783 aa16.48■□□□□ 0.23
PPP4R3A-206ENST00000554943 SLIT1O75093 1534 aa16.47■□□□□ 0.23
PPP4R3A-206ENST00000554943 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
PPP4R3A-206ENST00000554943 XRN1Q8IZH2 1706 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-206ENST00000554943 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-206ENST00000554943 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
PPP4R3A-206ENST00000554943 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
PPP4R3A-206ENST00000554943 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.23
PPP4R3A-206ENST00000554943 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
PPP4R3A-206ENST00000554943 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms