RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 RLBP1P12271 317 aa21.31■■□□□ 1
XRCC3-209ENST00000554913 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
XRCC3-209ENST00000554913 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
XRCC3-209ENST00000554913 BCL2L13Q9BXK5 485 aa21.31■■□□□ 1
XRCC3-209ENST00000554913 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
XRCC3-209ENST00000554913 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
XRCC3-209ENST00000554913 SBNO2Q9Y2G9 1366 aa21.3■■□□□ 1
XRCC3-209ENST00000554913 MROH1Q8NDA8 1641 aa21.3■■□□□ 1
XRCC3-209ENST00000554913 CHGAP10645 457 aaKnown RBP21.29■■□□□ 1
XRCC3-209ENST00000554913 SHPRHQ149N8 1683 aa21.29■■□□□ 1
XRCC3-209ENST00000554913 NOS1P29475 1434 aa21.28■■□□□ 1
XRCC3-209ENST00000554913 KIF1BO60333 1816 aa21.28■■□□□ 1
XRCC3-209ENST00000554913 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
XRCC3-209ENST00000554913 MROH2AA6NES4 1674 aa21.27■■□□□ 1
XRCC3-209ENST00000554913 NRXN1Q9ULB1 1477 aa21.27■■□□□ 1
XRCC3-209ENST00000554913 MTHFSP49914 203 aa21.26■□□□□ 0.99
XRCC3-209ENST00000554913 PMFBP1Q8TBY8 1022 aa21.26■□□□□ 0.99
XRCC3-209ENST00000554913 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
XRCC3-209ENST00000554913 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
XRCC3-209ENST00000554913 IFT172Q9UG01 1749 aa21.26■□□□□ 0.99
XRCC3-209ENST00000554913 SLKQ9H2G2 1235 aaPredicted RBP21.25■□□□□ 0.99
XRCC3-209ENST00000554913 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
XRCC3-209ENST00000554913 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
XRCC3-209ENST00000554913 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
XRCC3-209ENST00000554913 BECN1Q14457 450 aa21.24■□□□□ 0.99
XRCC3-209ENST00000554913 TMEM132EQ6IEE7 984 aa21.24■□□□□ 0.99
XRCC3-209ENST00000554913 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
XRCC3-209ENST00000554913 WDR63Q8IWG1 891 aa21.24■□□□□ 0.99
XRCC3-209ENST00000554913 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
XRCC3-209ENST00000554913 KIDINS220Q9ULH0 1771 aa21.22■□□□□ 0.99
XRCC3-209ENST00000554913 PPRC1Q5VV67 1664 aaKnown RBP21.21■□□□□ 0.99
XRCC3-209ENST00000554913 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.21■□□□□ 0.99
XRCC3-209ENST00000554913 POGKQ9P215 609 aa21.21■□□□□ 0.99
XRCC3-209ENST00000554913 C14orf93Q9H972 538 aaKnown RBP21.21■□□□□ 0.99
XRCC3-209ENST00000554913 AAMPQ13685 434 aa21.2■□□□□ 0.98
XRCC3-209ENST00000554913 ZNF518AQ6AHZ1 1483 aa21.19■□□□□ 0.98
XRCC3-209ENST00000554913 CCDC27Q2M243 656 aa21.19■□□□□ 0.98
XRCC3-209ENST00000554913 TBC1D32Q96NH3 1257 aa21.19■□□□□ 0.98
XRCC3-209ENST00000554913 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
XRCC3-209ENST00000554913 SETBP1Q9Y6X0 1596 aa21.18■□□□□ 0.98
XRCC3-209ENST00000554913 RWDD1Q9H446 243 aaPredicted RBP21.18■□□□□ 0.98
XRCC3-209ENST00000554913 ANTXR1Q9H6X2 564 aa21.18■□□□□ 0.98
XRCC3-209ENST00000554913 ADGRB3O60242 1522 aa21.18■□□□□ 0.98
XRCC3-209ENST00000554913 UPF2Q9HAU5 1272 aaKnown RBP21.17■□□□□ 0.98
XRCC3-209ENST00000554913 U2AF1L5P0DN76 240 aaPredicted RBP21.17■□□□□ 0.98
XRCC3-209ENST00000554913 U2AF1Q01081 240 aaKnown RBP eCLIP21.17■□□□□ 0.98
XRCC3-209ENST00000554913 QRICH2Q9H0J4 1663 aa21.16■□□□□ 0.98
XRCC3-209ENST00000554913 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
XRCC3-209ENST00000554913 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
XRCC3-209ENST00000554913 TBC1D2Q9BYX2 928 aa21.15■□□□□ 0.98
XRCC3-209ENST00000554913 ADGRB1O14514 1584 aa21.15■□□□□ 0.98
XRCC3-209ENST00000554913 MVPQ14764 893 aaKnown RBP21.15■□□□□ 0.98
XRCC3-209ENST00000554913 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.97
XRCC3-209ENST00000554913 RAPGEF3O95398 923 aa21.13■□□□□ 0.97
XRCC3-209ENST00000554913 TSR2Q969E8 191 aaKnown RBP21.13■□□□□ 0.97
XRCC3-209ENST00000554913 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
XRCC3-209ENST00000554913 LMTK2Q8IWU2 1503 aa21.13■□□□□ 0.97
XRCC3-209ENST00000554913 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
XRCC3-209ENST00000554913 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 NPATQ14207 1427 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 GGT6Q6P531 493 aa21.12■□□□□ 0.97
XRCC3-209ENST00000554913 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
XRCC3-209ENST00000554913 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
XRCC3-209ENST00000554913 SPRYD3Q8NCJ5 442 aa21.1■□□□□ 0.97
XRCC3-209ENST00000554913 PPLO60437 1756 aa21.1■□□□□ 0.97
XRCC3-209ENST00000554913 USP32Q8NFA0 1604 aa21.09■□□□□ 0.97
XRCC3-209ENST00000554913 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
XRCC3-209ENST00000554913 EVC2Q86UK5 1308 aa21.08■□□□□ 0.97
XRCC3-209ENST00000554913 ANKRD36BQ8N2N9 1353 aa21.08■□□□□ 0.97
XRCC3-209ENST00000554913 EXOSC9Q06265 439 aaKnown RBP21.08■□□□□ 0.96
XRCC3-209ENST00000554913 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
XRCC3-209ENST00000554913 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
XRCC3-209ENST00000554913 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
XRCC3-209ENST00000554913 NCBP3Q53F19 620 aaKnown RBP21.07■□□□□ 0.96
XRCC3-209ENST00000554913 TRIM27P14373 513 aa21.06■□□□□ 0.96
XRCC3-209ENST00000554913 TULP4Q9NRJ4 1543 aa21.05■□□□□ 0.96
XRCC3-209ENST00000554913 CFAP74Q9C0B2 1584 aa21.05■□□□□ 0.96
XRCC3-209ENST00000554913 U2SURPO15042 1029 aaKnown RBP21.05■□□□□ 0.96
XRCC3-209ENST00000554913 RPGRIP1LQ68CZ1 1315 aa21.05■□□□□ 0.96
XRCC3-209ENST00000554913 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
XRCC3-209ENST00000554913 MLH3Q9UHC1 1453 aa21.04■□□□□ 0.96
XRCC3-209ENST00000554913 NSD2O96028 1365 aa21.04■□□□□ 0.96
XRCC3-209ENST00000554913 MFAP1P55081 439 aaKnown RBP21.04■□□□□ 0.96
XRCC3-209ENST00000554913 FAM43AQ8N2R8 423 aa21.04■□□□□ 0.96
XRCC3-209ENST00000554913 TMPOP42166 694 aaKnown RBP21.04■□□□□ 0.96
XRCC3-209ENST00000554913 PLEKHF1Q96S99 279 aa21.04■□□□□ 0.96
XRCC3-209ENST00000554913 ADGRB2O60241 1585 aa21.04■□□□□ 0.96
XRCC3-209ENST00000554913 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
XRCC3-209ENST00000554913 C22orf23Q9BZE7 217 aa21.03■□□□□ 0.96
XRCC3-209ENST00000554913 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
XRCC3-209ENST00000554913 TRIM35Q9UPQ4 493 aa21.03■□□□□ 0.96
XRCC3-209ENST00000554913 CT47B1P0C2W7 299 aaPredicted RBP21.03■□□□□ 0.96
XRCC3-209ENST00000554913 PUS7Q96PZ0 661 aaKnown RBP21.03■□□□□ 0.96
XRCC3-209ENST00000554913 HECW2Q9P2P5 1572 aa21.02■□□□□ 0.96
XRCC3-209ENST00000554913 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.96
XRCC3-209ENST00000554913 GLI2P10070 1586 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms