RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
SPTLC2-203ENST00000554901 DCCP43146 1447 aa23.12■■□□□ 1.29
SPTLC2-203ENST00000554901 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
SPTLC2-203ENST00000554901 C14orf37Q86TY3 774 aa23.11■■□□□ 1.29
SPTLC2-203ENST00000554901 ADGRB2O60241 1585 aa23.11■■□□□ 1.29
SPTLC2-203ENST00000554901 MSH6P52701 1360 aa23.1■■□□□ 1.29
SPTLC2-203ENST00000554901 QRICH2Q9H0J4 1663 aa23.1■■□□□ 1.29
SPTLC2-203ENST00000554901 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
SPTLC2-203ENST00000554901 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
SPTLC2-203ENST00000554901 RBM33Q96EV2 1170 aaKnown RBP23.09■■□□□ 1.29
SPTLC2-203ENST00000554901 XIRP1Q702N8 1843 aaKnown RBP23.09■■□□□ 1.29
SPTLC2-203ENST00000554901 TESK2Q96S53 571 aa23.08■■□□□ 1.29
SPTLC2-203ENST00000554901 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.29
SPTLC2-203ENST00000554901 CDC42BPGQ6DT37 1551 aa23.08■■□□□ 1.29
SPTLC2-203ENST00000554901 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
SPTLC2-203ENST00000554901 CERKQ8TCT0 537 aa23.06■■□□□ 1.28
SPTLC2-203ENST00000554901 CADPS2Q86UW7 1296 aa23.05■■□□□ 1.28
SPTLC2-203ENST00000554901 WASLO00401 505 aaPredicted RBP23.04■■□□□ 1.28
SPTLC2-203ENST00000554901 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
SPTLC2-203ENST00000554901 ATF3P18847 181 aa23.03■■□□□ 1.28
SPTLC2-203ENST00000554901 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
SPTLC2-203ENST00000554901 TMF1P82094 1093 aa23.02■■□□□ 1.28
SPTLC2-203ENST00000554901 PUS7Q96PZ0 661 aaKnown RBP23.02■■□□□ 1.28
SPTLC2-203ENST00000554901 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
SPTLC2-203ENST00000554901 CDCA8Q53HL2 280 aa23■■□□□ 1.27
SPTLC2-203ENST00000554901 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
SPTLC2-203ENST00000554901 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
SPTLC2-203ENST00000554901 FMN2Q9NZ56 1722 aa22.98■■□□□ 1.27
SPTLC2-203ENST00000554901 MST1RQ04912 1400 aa22.95■■□□□ 1.26
SPTLC2-203ENST00000554901 TOM1O60784 492 aa22.95■■□□□ 1.26
SPTLC2-203ENST00000554901 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
SPTLC2-203ENST00000554901 ATAD2Q6PL18 1390 aa22.94■■□□□ 1.26
SPTLC2-203ENST00000554901 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
SPTLC2-203ENST00000554901 SLAIN2Q9P270 581 aa22.93■■□□□ 1.26
SPTLC2-203ENST00000554901 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
SPTLC2-203ENST00000554901 ATP7BP35670 1465 aa22.92■■□□□ 1.26
SPTLC2-203ENST00000554901 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
SPTLC2-203ENST00000554901 CCDC61Q9Y6R9 512 aa22.92■■□□□ 1.26
SPTLC2-203ENST00000554901 NUDT16Q96DE0 195 aaKnown RBP22.91■■□□□ 1.26
SPTLC2-203ENST00000554901 PRR36Q9H6K5 1346 aa22.9■■□□□ 1.26
SPTLC2-203ENST00000554901 NINLQ9Y2I6 1382 aa22.89■■□□□ 1.25
SPTLC2-203ENST00000554901 USP32Q8NFA0 1604 aa22.88■■□□□ 1.25
SPTLC2-203ENST00000554901 UBAP1LF5GYI3 381 aa22.87■■□□□ 1.25
SPTLC2-203ENST00000554901 NUTM2FA1L443 756 aa22.87■■□□□ 1.25
SPTLC2-203ENST00000554901 ITSN1Q15811 1721 aa22.86■■□□□ 1.25
SPTLC2-203ENST00000554901 TOPAZ1Q8N9V7 1692 aa22.85■■□□□ 1.25
SPTLC2-203ENST00000554901 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
SPTLC2-203ENST00000554901 C11orf95C9JLR9 678 aaPredicted RBP22.84■■□□□ 1.25
SPTLC2-203ENST00000554901 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
SPTLC2-203ENST00000554901 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
SPTLC2-203ENST00000554901 KIF7Q2M1P5 1343 aa22.83■■□□□ 1.25
SPTLC2-203ENST00000554901 PPIP5K1Q6PFW1 1433 aa22.83■■□□□ 1.25
SPTLC2-203ENST00000554901 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
SPTLC2-203ENST00000554901 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
SPTLC2-203ENST00000554901 KIF1AQ12756 1690 aa22.82■■□□□ 1.24
SPTLC2-203ENST00000554901 ORAI2Q96SN7 254 aa22.82■■□□□ 1.24
SPTLC2-203ENST00000554901 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
SPTLC2-203ENST00000554901 RGPD8O14715 1765 aaPredicted RBP22.8■■□□□ 1.24
SPTLC2-203ENST00000554901 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
SPTLC2-203ENST00000554901 POLR3AO14802 1390 aaPredicted RBP22.79■■□□□ 1.24
SPTLC2-203ENST00000554901 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 ROBO1Q9Y6N7 1651 aa22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 NPHP3Q7Z494 1330 aa22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 ZNF692Q9BU19 519 aaPredicted RBP22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 TERF2IPQ9NYB0 399 aa22.77■■□□□ 1.24
SPTLC2-203ENST00000554901 NGDNQ8NEJ9 315 aaKnown RBP22.76■■□□□ 1.23
SPTLC2-203ENST00000554901 PMFBP1Q8TBY8 1022 aa22.76■■□□□ 1.23
SPTLC2-203ENST00000554901 SLC12A5Q9H2X9 1139 aa22.76■■□□□ 1.23
SPTLC2-203ENST00000554901 ACEP12821 1306 aa22.75■■□□□ 1.23
SPTLC2-203ENST00000554901 PIP4K2BP78356 416 aa22.75■■□□□ 1.23
SPTLC2-203ENST00000554901 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
SPTLC2-203ENST00000554901 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
SPTLC2-203ENST00000554901 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
SPTLC2-203ENST00000554901 MYOM1P52179 1685 aa22.74■■□□□ 1.23
SPTLC2-203ENST00000554901 ANKRD36BQ8N2N9 1353 aa22.74■■□□□ 1.23
SPTLC2-203ENST00000554901 FOXO3O43524 673 aa22.72■■□□□ 1.23
SPTLC2-203ENST00000554901 AHDC1Q5TGY3 1603 aaPredicted RBP22.72■■□□□ 1.23
SPTLC2-203ENST00000554901 CD163L1Q9NR16 1453 aa22.72■■□□□ 1.23
SPTLC2-203ENST00000554901 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
SPTLC2-203ENST00000554901 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
SPTLC2-203ENST00000554901 PSME1Q06323 249 aa22.7■■□□□ 1.22
SPTLC2-203ENST00000554901 A0A1W2PP64 1363 aa22.69■■□□□ 1.22
SPTLC2-203ENST00000554901 FBXO41Q8TF61 875 aa22.69■■□□□ 1.22
SPTLC2-203ENST00000554901 USP6P35125 1406 aa22.69■■□□□ 1.22
SPTLC2-203ENST00000554901 SOS2Q07890 1332 aaPredicted RBP22.69■■□□□ 1.22
SPTLC2-203ENST00000554901 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
SPTLC2-203ENST00000554901 AKAP12Q02952 1782 aa22.68■■□□□ 1.22
SPTLC2-203ENST00000554901 KRT28Q7Z3Y7 464 aa22.67■■□□□ 1.22
SPTLC2-203ENST00000554901 PXDNQ92626 1479 aa22.67■■□□□ 1.22
SPTLC2-203ENST00000554901 SBNO1A3KN83 1393 aa22.66■■□□□ 1.22
SPTLC2-203ENST00000554901 EDC4Q6P2E9 1401 aaKnown RBP22.66■■□□□ 1.22
SPTLC2-203ENST00000554901 SSH2Q76I76 1423 aa22.66■■□□□ 1.22
SPTLC2-203ENST00000554901 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
SPTLC2-203ENST00000554901 PANK3Q9H999 370 aa22.65■■□□□ 1.22
SPTLC2-203ENST00000554901 DDX17Q92841 729 aaKnown RBP22.63■■□□□ 1.21
SPTLC2-203ENST00000554901 TTC21AQ8NDW8 1320 aa22.63■■□□□ 1.21
SPTLC2-203ENST00000554901 LRRC59Q96AG4 307 aaKnown RBP22.62■■□□□ 1.21
SPTLC2-203ENST00000554901 NRKQ7Z2Y5 1582 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms