RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
LINC01550-204ENST00000554822 PPEF1O14829 653 aaPredicted RBP10.53□□□□□ -0.72
LINC01550-204ENST00000554822 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
LINC01550-204ENST00000554822 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
LINC01550-204ENST00000554822 GGCXP38435 758 aa10.52□□□□□ -0.73
LINC01550-204ENST00000554822 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
LINC01550-204ENST00000554822 PRDM9Q9NQV7 894 aa10.52□□□□□ -0.73
LINC01550-204ENST00000554822 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
LINC01550-204ENST00000554822 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
LINC01550-204ENST00000554822 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
LINC01550-204ENST00000554822 SPTLC1O15269 473 aa10.51□□□□□ -0.73
LINC01550-204ENST00000554822 USB1Q9BQ65 265 aaKnown RBP10.51□□□□□ -0.73
LINC01550-204ENST00000554822 POLR3EQ9NVU0 708 aa10.51□□□□□ -0.73
LINC01550-204ENST00000554822 CSPP1Q1MSJ5 1256 aa10.5□□□□□ -0.73
LINC01550-204ENST00000554822 IL27Q8NEV9 243 aa10.5□□□□□ -0.73
LINC01550-204ENST00000554822 RSPH6AQ9H0K4 717 aa10.5□□□□□ -0.73
LINC01550-204ENST00000554822 LIMD1Q9UGP4 676 aa10.5□□□□□ -0.73
LINC01550-204ENST00000554822 GJA5P36382 358 aa10.49□□□□□ -0.73
LINC01550-204ENST00000554822 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
LINC01550-204ENST00000554822 CLK2P49760 499 aaKnown RBP10.46□□□□□ -0.73
LINC01550-204ENST00000554822 MTMR2Q13614 643 aa10.46□□□□□ -0.73
LINC01550-204ENST00000554822 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
LINC01550-204ENST00000554822 SKIV2LQ15477 1246 aaKnown RBP10.45□□□□□ -0.74
LINC01550-204ENST00000554822 ANKLE1Q8NAG6 615 aa10.45□□□□□ -0.74
LINC01550-204ENST00000554822 CABLES1Q8TDN4 633 aa10.45□□□□□ -0.74
LINC01550-204ENST00000554822 HRCP23327 699 aa10.44□□□□□ -0.74
LINC01550-204ENST00000554822 QPCTQ16769 361 aa10.44□□□□□ -0.74
LINC01550-204ENST00000554822 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
LINC01550-204ENST00000554822 RGS20O76081 388 aa10.43□□□□□ -0.74
LINC01550-204ENST00000554822 MMP16P51512 607 aa10.43□□□□□ -0.74
LINC01550-204ENST00000554822 PROCA1Q8NCQ7 364 aaPredicted RBP10.43□□□□□ -0.74
LINC01550-204ENST00000554822 PRR7Q8TB68 274 aa10.43□□□□□ -0.74
LINC01550-204ENST00000554822 ZBTB3Q9H5J0 574 aa10.43□□□□□ -0.74
LINC01550-204ENST00000554822 ATP1B4Q9UN42 357 aaPredicted RBP10.43□□□□□ -0.74
LINC01550-204ENST00000554822 FCF1Q9Y324 198 aaKnown RBP10.43□□□□□ -0.74
LINC01550-204ENST00000554822 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
LINC01550-204ENST00000554822 TUSC1Q2TAM9 212 aa10.42□□□□□ -0.74
LINC01550-204ENST00000554822 PLA2G2CQ5R387 149 aa10.42□□□□□ -0.74
LINC01550-204ENST00000554822 PRKD2Q9BZL6 878 aa10.42□□□□□ -0.74
LINC01550-204ENST00000554822 SPDYE5A6NIY4 337 aa10.41□□□□□ -0.74
LINC01550-204ENST00000554822 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-204ENST00000554822 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-204ENST00000554822 LILRB3O75022 631 aa10.41□□□□□ -0.74
LINC01550-204ENST00000554822 JUNDP17535 347 aa10.41□□□□□ -0.74
LINC01550-204ENST00000554822 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-204ENST00000554822 PRPF38BQ5VTL8 546 aaKnown RBP10.41□□□□□ -0.74
LINC01550-204ENST00000554822 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-204ENST00000554822 EMID1Q96A84 441 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-204ENST00000554822 CFAP99D6REC4 459 aa10.4□□□□□ -0.74
LINC01550-204ENST00000554822 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
LINC01550-204ENST00000554822 SLC19A1P41440 591 aa10.38□□□□□ -0.75
LINC01550-204ENST00000554822 FBXO31Q5XUX0 539 aaPredicted RBP10.38□□□□□ -0.75
LINC01550-204ENST00000554822 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
LINC01550-204ENST00000554822 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
LINC01550-204ENST00000554822 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC01550-204ENST00000554822 TSC1Q92574 1164 aa10.36□□□□□ -0.75
LINC01550-204ENST00000554822 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
LINC01550-204ENST00000554822 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
LINC01550-204ENST00000554822 IRX2Q9BZI1 471 aaPredicted RBP10.35□□□□□ -0.75
LINC01550-204ENST00000554822 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
LINC01550-204ENST00000554822 DESI1Q6ICB0 168 aa10.34□□□□□ -0.75
LINC01550-204ENST00000554822 NUDT12Q9BQG2 462 aa10.34□□□□□ -0.75
LINC01550-204ENST00000554822 SPRYD7Q5W111 196 aa10.32□□□□□ -0.76
LINC01550-204ENST00000554822 ZBTB24O43167 697 aaPredicted RBP10.31□□□□□ -0.76
LINC01550-204ENST00000554822 CCNYL3P0C7X3 344 aa10.31□□□□□ -0.76
LINC01550-204ENST00000554822 PTPRNQ16849 979 aa10.31□□□□□ -0.76
LINC01550-204ENST00000554822 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
LINC01550-204ENST00000554822 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
LINC01550-204ENST00000554822 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
LINC01550-204ENST00000554822 RPIAP49247 311 aa10.3□□□□□ -0.76
LINC01550-204ENST00000554822 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
LINC01550-204ENST00000554822 EVA1BQ9NVM1 165 aa10.29□□□□□ -0.76
LINC01550-204ENST00000554822 CTDSPL2Q05D32 466 aa10.28□□□□□ -0.76
LINC01550-204ENST00000554822 ZNF697Q5TEC3 545 aa10.28□□□□□ -0.76
LINC01550-204ENST00000554822 ZNF598Q86UK7 904 aaKnown RBP10.28□□□□□ -0.76
LINC01550-204ENST00000554822 HELBQ8NG08 1087 aaPredicted RBP10.28□□□□□ -0.76
LINC01550-204ENST00000554822 CD2BP2O95400 341 aaKnown RBP10.27□□□□□ -0.77
LINC01550-204ENST00000554822 CTHP32929 405 aa10.26□□□□□ -0.77
LINC01550-204ENST00000554822 RFC5P40937 340 aa10.26□□□□□ -0.77
LINC01550-204ENST00000554822 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
LINC01550-204ENST00000554822 TRIM32Q13049 653 aa10.26□□□□□ -0.77
LINC01550-204ENST00000554822 AP1G2O75843 785 aa10.25□□□□□ -0.77
LINC01550-204ENST00000554822 MAP10Q9P2G4 905 aa10.25□□□□□ -0.77
LINC01550-204ENST00000554822 UNC93B1Q9H1C4 597 aa10.24□□□□□ -0.77
LINC01550-204ENST00000554822 F12P00748 615 aaPredicted RBP10.23□□□□□ -0.77
LINC01550-204ENST00000554822 TRIM67Q6ZTA4 783 aa10.23□□□□□ -0.77
LINC01550-204ENST00000554822 FOXC1Q12948 553 aa10.22□□□□□ -0.77
LINC01550-204ENST00000554822 LRRN4Q8WUT4 740 aa10.22□□□□□ -0.77
LINC01550-204ENST00000554822 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.77
LINC01550-204ENST00000554822 TNFRSF10AO00220 468 aa10.2□□□□□ -0.78
LINC01550-204ENST00000554822 GFRA3O60609 400 aa10.2□□□□□ -0.78
LINC01550-204ENST00000554822 SKOR1P84550 965 aa10.2□□□□□ -0.78
LINC01550-204ENST00000554822 BAP1Q92560 729 aa10.2□□□□□ -0.78
LINC01550-204ENST00000554822 PKD2L1Q9P0L9 805 aa10.2□□□□□ -0.78
LINC01550-204ENST00000554822 GDF9O60383 454 aa10.19□□□□□ -0.78
LINC01550-204ENST00000554822 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
LINC01550-204ENST00000554822 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
LINC01550-204ENST00000554822 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
LINC01550-204ENST00000554822 WNT7BP56706 349 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 SH3BP2P78314 561 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms