RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
LINC00639-202ENST00000554732 NEK4P51957 841 aa16.69■□□□□ 0.26
LINC00639-202ENST00000554732 GPS2Q13227 327 aa16.69■□□□□ 0.26
LINC00639-202ENST00000554732 NUTM2DQ5VT03 806 aaPredicted RBP16.69■□□□□ 0.26
LINC00639-202ENST00000554732 TBC1D32Q96NH3 1257 aa16.69■□□□□ 0.26
LINC00639-202ENST00000554732 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
LINC00639-202ENST00000554732 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
LINC00639-202ENST00000554732 OFD1O75665 1012 aa16.68■□□□□ 0.26
LINC00639-202ENST00000554732 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
LINC00639-202ENST00000554732 VPS37CA5D8V6 355 aaPredicted RBP16.68■□□□□ 0.26
LINC00639-202ENST00000554732 VGLL3A8MV65 326 aa16.68■□□□□ 0.26
LINC00639-202ENST00000554732 C1orf115Q9H7X2 142 aa16.68■□□□□ 0.26
LINC00639-202ENST00000554732 SOX12O15370 315 aa16.68■□□□□ 0.26
LINC00639-202ENST00000554732 ATP6V1DQ9Y5K8 247 aa16.68■□□□□ 0.26
LINC00639-202ENST00000554732 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
LINC00639-202ENST00000554732 TRIM5Q9C035 493 aa16.67■□□□□ 0.26
LINC00639-202ENST00000554732 CDC45O75419 566 aa16.67■□□□□ 0.26
LINC00639-202ENST00000554732 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
LINC00639-202ENST00000554732 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
LINC00639-202ENST00000554732 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
LINC00639-202ENST00000554732 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
LINC00639-202ENST00000554732 ANKRD50Q9ULJ7 1429 aa16.66■□□□□ 0.26
LINC00639-202ENST00000554732 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
LINC00639-202ENST00000554732 FIBPO43427 364 aa16.66■□□□□ 0.26
LINC00639-202ENST00000554732 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
LINC00639-202ENST00000554732 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
LINC00639-202ENST00000554732 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
LINC00639-202ENST00000554732 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
LINC00639-202ENST00000554732 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
LINC00639-202ENST00000554732 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
LINC00639-202ENST00000554732 SKIDA1Q1XH10 827 aa16.65■□□□□ 0.26
LINC00639-202ENST00000554732 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
LINC00639-202ENST00000554732 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
LINC00639-202ENST00000554732 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
LINC00639-202ENST00000554732 HMMRO75330 724 aa16.64■□□□□ 0.25
LINC00639-202ENST00000554732 TAF3Q5VWG9 929 aa16.64■□□□□ 0.25
LINC00639-202ENST00000554732 RABEP1Q15276 862 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
LINC00639-202ENST00000554732 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 AAMPQ13685 434 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 DUSP27Q5VZP5 1158 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 NCOA1Q15788 1441 aa16.63■□□□□ 0.25
LINC00639-202ENST00000554732 MNS1Q8NEH6 495 aa16.62■□□□□ 0.25
LINC00639-202ENST00000554732 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
LINC00639-202ENST00000554732 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
LINC00639-202ENST00000554732 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
LINC00639-202ENST00000554732 BAG4O95429 457 aaKnown RBP16.6■□□□□ 0.25
LINC00639-202ENST00000554732 TPM4P67936 248 aa16.6■□□□□ 0.25
LINC00639-202ENST00000554732 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
LINC00639-202ENST00000554732 ARGLU1Q9NWB6 273 aaPredicted RBP16.6■□□□□ 0.25
LINC00639-202ENST00000554732 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
LINC00639-202ENST00000554732 SMC3Q9UQE7 1217 aa16.6■□□□□ 0.25
LINC00639-202ENST00000554732 CCDC94Q9BW85 323 aaPredicted RBP16.6■□□□□ 0.25
LINC00639-202ENST00000554732 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
LINC00639-202ENST00000554732 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
LINC00639-202ENST00000554732 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
LINC00639-202ENST00000554732 MVPQ14764 893 aaKnown RBP16.59■□□□□ 0.25
LINC00639-202ENST00000554732 RIPK4P57078 832 aa16.59■□□□□ 0.25
LINC00639-202ENST00000554732 ZKSCAN5Q9Y2L8 839 aa16.59■□□□□ 0.25
LINC00639-202ENST00000554732 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.25
LINC00639-202ENST00000554732 CDK13Q14004 1512 aaKnown RBP16.58■□□□□ 0.25
LINC00639-202ENST00000554732 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.25
LINC00639-202ENST00000554732 HFM1A2PYH4 1435 aa16.58■□□□□ 0.24
LINC00639-202ENST00000554732 KLHL40Q2TBA0 621 aa16.58■□□□□ 0.24
LINC00639-202ENST00000554732 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
LINC00639-202ENST00000554732 TSC1Q92574 1164 aa16.57■□□□□ 0.24
LINC00639-202ENST00000554732 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
LINC00639-202ENST00000554732 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
LINC00639-202ENST00000554732 CUL7Q14999 1698 aa16.57■□□□□ 0.24
LINC00639-202ENST00000554732 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
LINC00639-202ENST00000554732 TPM3P06753 285 aa16.56■□□□□ 0.24
LINC00639-202ENST00000554732 SF3A1Q15459 793 aaKnown RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
LINC00639-202ENST00000554732 CHD1LQ86WJ1 897 aa16.56■□□□□ 0.24
LINC00639-202ENST00000554732 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 HAP1P54257 671 aaPredicted RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 CREBRFQ8IUR6 639 aa16.56■□□□□ 0.24
LINC00639-202ENST00000554732 C16orf45Q96MC5 204 aaPredicted RBP16.56■□□□□ 0.24
LINC00639-202ENST00000554732 H3BQV1 296 aa16.55■□□□□ 0.24
LINC00639-202ENST00000554732 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
LINC00639-202ENST00000554732 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
LINC00639-202ENST00000554732 TTC12Q9H892 705 aaPredicted RBP16.55■□□□□ 0.24
LINC00639-202ENST00000554732 CWC15Q9P013 229 aaKnown RBP16.55■□□□□ 0.24
LINC00639-202ENST00000554732 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
LINC00639-202ENST00000554732 ARHGAP5Q13017 1502 aa16.54■□□□□ 0.24
LINC00639-202ENST00000554732 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
LINC00639-202ENST00000554732 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
LINC00639-202ENST00000554732 NAIPQ13075 1403 aa16.53■□□□□ 0.24
LINC00639-202ENST00000554732 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
LINC00639-202ENST00000554732 HDGFL2Q7Z4V5 671 aaPredicted RBP16.53■□□□□ 0.24
LINC00639-202ENST00000554732 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
LINC00639-202ENST00000554732 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
LINC00639-202ENST00000554732 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
LINC00639-202ENST00000554732 MCM5P33992 734 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms