RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
KTN1-216ENST00000554570 S1PR4O95977 384 aa10.26□□□□□ -0.77
KTN1-216ENST00000554570 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
KTN1-216ENST00000554570 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
KTN1-216ENST00000554570 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
KTN1-216ENST00000554570 USB1Q9BQ65 265 aaKnown RBP10.26□□□□□ -0.77
KTN1-216ENST00000554570 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
KTN1-216ENST00000554570 RNF223E7ERA6 249 aa10.25□□□□□ -0.77
KTN1-216ENST00000554570 TUSC1Q2TAM9 212 aa10.25□□□□□ -0.77
KTN1-216ENST00000554570 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
KTN1-216ENST00000554570 ANKLE1Q8NAG6 615 aa10.24□□□□□ -0.77
KTN1-216ENST00000554570 RETREG3Q86VR2 466 aa10.23□□□□□ -0.77
KTN1-216ENST00000554570 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
KTN1-216ENST00000554570 SPDYE5A6NIY4 337 aa10.22□□□□□ -0.77
KTN1-216ENST00000554570 MMP16P51512 607 aa10.22□□□□□ -0.77
KTN1-216ENST00000554570 PRPF38BQ5VTL8 546 aaKnown RBP10.21□□□□□ -0.77
KTN1-216ENST00000554570 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
KTN1-216ENST00000554570 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
KTN1-216ENST00000554570 MTMR2Q13614 643 aa10.2□□□□□ -0.78
KTN1-216ENST00000554570 LIMD1Q9UGP4 676 aa10.2□□□□□ -0.78
KTN1-216ENST00000554570 DXOO77932 396 aaKnown RBP10.19□□□□□ -0.78
KTN1-216ENST00000554570 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
KTN1-216ENST00000554570 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
KTN1-216ENST00000554570 PRDM9Q9NQV7 894 aa10.19□□□□□ -0.78
KTN1-216ENST00000554570 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
KTN1-216ENST00000554570 V9GY48 417 aaPredicted RBP10.19□□□□□ -0.78
KTN1-216ENST00000554570 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
KTN1-216ENST00000554570 CLK2P49760 499 aaKnown RBP10.18□□□□□ -0.78
KTN1-216ENST00000554570 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
KTN1-216ENST00000554570 GOPCQ9HD26 462 aa10.18□□□□□ -0.78
KTN1-216ENST00000554570 DESI1Q6ICB0 168 aa10.17□□□□□ -0.78
KTN1-216ENST00000554570 JUNDP17535 347 aa10.16□□□□□ -0.78
KTN1-216ENST00000554570 HRCP23327 699 aa10.16□□□□□ -0.78
KTN1-216ENST00000554570 PRKD2Q9BZL6 878 aa10.16□□□□□ -0.78
KTN1-216ENST00000554570 LILRB3O75022 631 aa10.15□□□□□ -0.78
KTN1-216ENST00000554570 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
KTN1-216ENST00000554570 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.78
KTN1-216ENST00000554570 PRR7Q8TB68 274 aa10.14□□□□□ -0.79
KTN1-216ENST00000554570 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
KTN1-216ENST00000554570 QPCTQ16769 361 aa10.13□□□□□ -0.79
KTN1-216ENST00000554570 PLA2G2CQ5R387 149 aa10.13□□□□□ -0.79
KTN1-216ENST00000554570 IL27Q8NEV9 243 aa10.13□□□□□ -0.79
KTN1-216ENST00000554570 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
KTN1-216ENST00000554570 SLC19A1P41440 591 aa10.12□□□□□ -0.79
KTN1-216ENST00000554570 CABLES1Q8TDN4 633 aa10.12□□□□□ -0.79
KTN1-216ENST00000554570 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
KTN1-216ENST00000554570 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
KTN1-216ENST00000554570 CFAP99D6REC4 459 aa10.1□□□□□ -0.79
KTN1-216ENST00000554570 RPIAP49247 311 aa10.1□□□□□ -0.79
KTN1-216ENST00000554570 PTPRNQ16849 979 aa10.1□□□□□ -0.79
KTN1-216ENST00000554570 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
KTN1-216ENST00000554570 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
KTN1-216ENST00000554570 NUTM2DQ5VT03 806 aaPredicted RBP10.09□□□□□ -0.79
KTN1-216ENST00000554570 SPRYD7Q5W111 196 aa10.09□□□□□ -0.79
KTN1-216ENST00000554570 PPP2R2DQ66LE6 453 aa10.09□□□□□ -0.79
KTN1-216ENST00000554570 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
KTN1-216ENST00000554570 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
KTN1-216ENST00000554570 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
KTN1-216ENST00000554570 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
KTN1-216ENST00000554570 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
KTN1-216ENST00000554570 ZNF598Q86UK7 904 aaKnown RBP10.07□□□□□ -0.8
KTN1-216ENST00000554570 CCNYL3P0C7X3 344 aa10.06□□□□□ -0.8
KTN1-216ENST00000554570 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
KTN1-216ENST00000554570 EVA1BQ9NVM1 165 aa10.06□□□□□ -0.8
KTN1-216ENST00000554570 ZBTB24O43167 697 aaPredicted RBP10.05□□□□□ -0.8
KTN1-216ENST00000554570 CD2BP2O95400 341 aaKnown RBP10.05□□□□□ -0.8
KTN1-216ENST00000554570 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
KTN1-216ENST00000554570 HELBQ8NG08 1087 aaPredicted RBP10.04□□□□□ -0.8
KTN1-216ENST00000554570 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
KTN1-216ENST00000554570 KCNH2Q12809 1159 aa10.02□□□□□ -0.81
KTN1-216ENST00000554570 TRIM32Q13049 653 aa10.01□□□□□ -0.81
KTN1-216ENST00000554570 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
KTN1-216ENST00000554570 PTCRAQ6ISU1 281 aaPredicted RBP10.01□□□□□ -0.81
KTN1-216ENST00000554570 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
KTN1-216ENST00000554570 PER1O15534 1290 aaPredicted RBP10□□□□□ -0.81
KTN1-216ENST00000554570 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
KTN1-216ENST00000554570 PRR20EP86478 221 aa9.99□□□□□ -0.81
KTN1-216ENST00000554570 PRR20CP86479 221 aa9.99□□□□□ -0.81
KTN1-216ENST00000554570 PRR20DP86480 221 aa9.99□□□□□ -0.81
KTN1-216ENST00000554570 PRR20BP86481 221 aa9.99□□□□□ -0.81
KTN1-216ENST00000554570 PRR20AP86496 221 aa9.99□□□□□ -0.81
KTN1-216ENST00000554570 TSC1Q92574 1164 aa9.99□□□□□ -0.81
KTN1-216ENST00000554570 IRX2Q9BZI1 471 aaPredicted RBP9.99□□□□□ -0.81
KTN1-216ENST00000554570 RFC5P40937 340 aa9.98□□□□□ -0.81
KTN1-216ENST00000554570 CTDSPL2Q05D32 466 aa9.98□□□□□ -0.81
KTN1-216ENST00000554570 LAPTM4AQ15012 233 aa9.98□□□□□ -0.81
KTN1-216ENST00000554570 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
KTN1-216ENST00000554570 GDF9O60383 454 aa9.97□□□□□ -0.81
KTN1-216ENST00000554570 WNT7BP56706 349 aa9.97□□□□□ -0.81
KTN1-216ENST00000554570 UNC93B1Q9H1C4 597 aa9.97□□□□□ -0.81
KTN1-216ENST00000554570 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
KTN1-216ENST00000554570 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
KTN1-216ENST00000554570 MAP10Q9P2G4 905 aa9.95□□□□□ -0.82
KTN1-216ENST00000554570 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
KTN1-216ENST00000554570 WNT7AO00755 349 aa9.94□□□□□ -0.82
KTN1-216ENST00000554570 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
KTN1-216ENST00000554570 CTHP32929 405 aa9.94□□□□□ -0.82
KTN1-216ENST00000554570 GFRA3O60609 400 aa9.93□□□□□ -0.82
KTN1-216ENST00000554570 AP1G2O75843 785 aa9.93□□□□□ -0.82
KTN1-216ENST00000554570 SKOR1P84550 965 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms