RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
HNRNPC-212ENST00000554539 FOXD1Q16676 465 aa12.97□□□□□ -0.33
HNRNPC-212ENST00000554539 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
HNRNPC-212ENST00000554539 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.33
HNRNPC-212ENST00000554539 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
HNRNPC-212ENST00000554539 PTCH1Q13635 1447 aa12.96□□□□□ -0.34
HNRNPC-212ENST00000554539 RGL3Q3MIN7 710 aa12.95□□□□□ -0.34
HNRNPC-212ENST00000554539 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
HNRNPC-212ENST00000554539 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
HNRNPC-212ENST00000554539 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-212ENST00000554539 CCDC9Q9Y3X0 531 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-212ENST00000554539 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
HNRNPC-212ENST00000554539 UNC5CLQ8IV45 518 aa12.93□□□□□ -0.34
HNRNPC-212ENST00000554539 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
HNRNPC-212ENST00000554539 MYOM2P54296 1465 aa12.92□□□□□ -0.34
HNRNPC-212ENST00000554539 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-212ENST00000554539 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
HNRNPC-212ENST00000554539 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
HNRNPC-212ENST00000554539 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
HNRNPC-212ENST00000554539 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-212ENST00000554539 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
HNRNPC-212ENST00000554539 PXDNQ92626 1479 aa12.91□□□□□ -0.34
HNRNPC-212ENST00000554539 A0A0G2JS52 829 aa12.9□□□□□ -0.34
HNRNPC-212ENST00000554539 MYT1Q01538 1121 aa12.9□□□□□ -0.34
HNRNPC-212ENST00000554539 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-212ENST00000554539 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
HNRNPC-212ENST00000554539 NAIPQ13075 1403 aa12.89□□□□□ -0.35
HNRNPC-212ENST00000554539 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
HNRNPC-212ENST00000554539 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 LAMC1P11047 1609 aa12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 KIF1BO60333 1816 aa12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
HNRNPC-212ENST00000554539 GLI3P10071 1580 aa12.87□□□□□ -0.35
HNRNPC-212ENST00000554539 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-212ENST00000554539 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
HNRNPC-212ENST00000554539 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-212ENST00000554539 SLIT2O94813 1529 aa12.85□□□□□ -0.35
HNRNPC-212ENST00000554539 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-212ENST00000554539 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 VPS72Q15906 364 aa12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
HNRNPC-212ENST00000554539 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-212ENST00000554539 HRCP23327 699 aa12.82□□□□□ -0.36
HNRNPC-212ENST00000554539 PSME1Q06323 249 aa12.82□□□□□ -0.36
HNRNPC-212ENST00000554539 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-212ENST00000554539 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
HNRNPC-212ENST00000554539 PPLO60437 1756 aa12.8□□□□□ -0.36
HNRNPC-212ENST00000554539 BAG6P46379 1132 aa12.8□□□□□ -0.36
HNRNPC-212ENST00000554539 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
HNRNPC-212ENST00000554539 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-212ENST00000554539 CFAP70Q5T0N1 1121 aa12.79□□□□□ -0.36
HNRNPC-212ENST00000554539 ABCC11Q96J66 1382 aa12.79□□□□□ -0.36
HNRNPC-212ENST00000554539 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-212ENST00000554539 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
HNRNPC-212ENST00000554539 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-212ENST00000554539 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
HNRNPC-212ENST00000554539 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
HNRNPC-212ENST00000554539 USP32Q8NFA0 1604 aa12.77□□□□□ -0.36
HNRNPC-212ENST00000554539 EZH2Q15910 746 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-212ENST00000554539 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
HNRNPC-212ENST00000554539 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-212ENST00000554539 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-212ENST00000554539 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-212ENST00000554539 MPHOSPH9Q99550 1183 aa12.75□□□□□ -0.37
HNRNPC-212ENST00000554539 POGKQ9P215 609 aa12.75□□□□□ -0.37
HNRNPC-212ENST00000554539 EP400Q96L91 3159 aa12.75□□□□□ -0.37
HNRNPC-212ENST00000554539 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
HNRNPC-212ENST00000554539 TECPR2O15040 1411 aa12.74□□□□□ -0.37
HNRNPC-212ENST00000554539 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-212ENST00000554539 TRIM37O94972 964 aa12.74□□□□□ -0.37
HNRNPC-212ENST00000554539 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-212ENST00000554539 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
HNRNPC-212ENST00000554539 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
HNRNPC-212ENST00000554539 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
HNRNPC-212ENST00000554539 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
HNRNPC-212ENST00000554539 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
HNRNPC-212ENST00000554539 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
HNRNPC-212ENST00000554539 ANKRD30BQ9BXX2 1392 aa12.72□□□□□ -0.37
HNRNPC-212ENST00000554539 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-212ENST00000554539 STRN4Q9NRL3 753 aa12.72□□□□□ -0.37
HNRNPC-212ENST00000554539 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
HNRNPC-212ENST00000554539 PIK3C2GO75747 1445 aa12.71□□□□□ -0.38
HNRNPC-212ENST00000554539 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 APBA3O96018 575 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 SIRT1Q96EB6 747 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 PRDM11Q9NQV5 511 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 KDM2AQ9Y2K7 1162 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 NRXN1Q9ULB1 1477 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
HNRNPC-212ENST00000554539 LRP5O75197 1615 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms