RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
PTPN21-205ENST00000554270 LNPKQ9C0E8 428 aa14.5□□□□□ -0.09
PTPN21-205ENST00000554270 NKTRP30414 1462 aaKnown RBP14.49□□□□□ -0.09
PTPN21-205ENST00000554270 ASXL1Q8IXJ9 1541 aa14.49□□□□□ -0.09
PTPN21-205ENST00000554270 ZKSCAN2Q63HK3 967 aa14.49□□□□□ -0.09
PTPN21-205ENST00000554270 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
PTPN21-205ENST00000554270 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
PTPN21-205ENST00000554270 NAP1L5Q96NT1 182 aaPredicted RBP14.49□□□□□ -0.09
PTPN21-205ENST00000554270 TRPM1Q7Z4N2 1603 aa14.48□□□□□ -0.09
PTPN21-205ENST00000554270 HSP90AB1P08238 724 aaKnown RBP14.48□□□□□ -0.09
PTPN21-205ENST00000554270 DZIP1LQ8IYY4 767 aaKnown RBP14.48□□□□□ -0.09
PTPN21-205ENST00000554270 C1orf115Q9H7X2 142 aa14.48□□□□□ -0.09
PTPN21-205ENST00000554270 ABCC2Q92887 1545 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 ATP10AO60312 1499 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 IDI1Q13907 227 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 PDE3AQ14432 1141 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 HSCBQ8IWL3 235 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 ZMYM4Q5VZL5 1548 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 FBXO31Q5XUX0 539 aaPredicted RBP14.47□□□□□ -0.09
PTPN21-205ENST00000554270 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
PTPN21-205ENST00000554270 STAC3Q96MF2 364 aa14.46□□□□□ -0.09
PTPN21-205ENST00000554270 ESF1Q9H501 851 aaKnown RBP14.46□□□□□ -0.09
PTPN21-205ENST00000554270 ZNF521Q96K83 1311 aa14.46□□□□□ -0.09
PTPN21-205ENST00000554270 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
PTPN21-205ENST00000554270 CABP1Q9NZU7 370 aa14.46□□□□□ -0.1
PTPN21-205ENST00000554270 HDGFL2Q7Z4V5 671 aaPredicted RBP14.45□□□□□ -0.1
PTPN21-205ENST00000554270 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
PTPN21-205ENST00000554270 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
PTPN21-205ENST00000554270 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
PTPN21-205ENST00000554270 PRDM15P57071 1507 aaPredicted RBP14.44□□□□□ -0.1
PTPN21-205ENST00000554270 WAPLQ7Z5K2 1190 aa14.44□□□□□ -0.1
PTPN21-205ENST00000554270 ANKRD45Q5TZF3 282 aa14.43□□□□□ -0.1
PTPN21-205ENST00000554270 SSH1Q8WYL5 1049 aa14.43□□□□□ -0.1
PTPN21-205ENST00000554270 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
PTPN21-205ENST00000554270 DIAPH1O60610 1272 aaKnown RBP14.43□□□□□ -0.1
PTPN21-205ENST00000554270 C22orf23Q9BZE7 217 aa14.43□□□□□ -0.1
PTPN21-205ENST00000554270 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
PTPN21-205ENST00000554270 GOLGA6L3A6NEY3 463 aa14.42□□□□□ -0.1
PTPN21-205ENST00000554270 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
PTPN21-205ENST00000554270 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
PTPN21-205ENST00000554270 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
PTPN21-205ENST00000554270 TMPOP42166 694 aaKnown RBP14.41□□□□□ -0.1
PTPN21-205ENST00000554270 CHD1O14646 1710 aa14.41□□□□□ -0.1
PTPN21-205ENST00000554270 PIK3C2GO75747 1445 aa14.4□□□□□ -0.1
PTPN21-205ENST00000554270 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
PTPN21-205ENST00000554270 MVPQ14764 893 aaKnown RBP14.4□□□□□ -0.1
PTPN21-205ENST00000554270 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
PTPN21-205ENST00000554270 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
PTPN21-205ENST00000554270 TRIM27P14373 513 aa14.39□□□□□ -0.11
PTPN21-205ENST00000554270 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
PTPN21-205ENST00000554270 MYO5CQ9NQX4 1742 aa14.39□□□□□ -0.11
PTPN21-205ENST00000554270 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
PTPN21-205ENST00000554270 FOXD4L5Q5VV16 416 aaPredicted RBP14.39□□□□□ -0.11
PTPN21-205ENST00000554270 FOXD4L4Q8WXT5 416 aaPredicted RBP14.39□□□□□ -0.11
PTPN21-205ENST00000554270 WDR63Q8IWG1 891 aa14.38□□□□□ -0.11
PTPN21-205ENST00000554270 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
PTPN21-205ENST00000554270 DCTN1Q14203 1278 aa14.38□□□□□ -0.11
PTPN21-205ENST00000554270 TRMT2AQ8IZ69 625 aaKnown RBP14.38□□□□□ -0.11
PTPN21-205ENST00000554270 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
PTPN21-205ENST00000554270 L1TD1Q5T7N2 865 aaKnown RBP14.37□□□□□ -0.11
PTPN21-205ENST00000554270 CD109Q6YHK3 1445 aa14.37□□□□□ -0.11
PTPN21-205ENST00000554270 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
PTPN21-205ENST00000554270 IPO8O15397 1037 aaKnown RBP14.36□□□□□ -0.11
PTPN21-205ENST00000554270 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
PTPN21-205ENST00000554270 FYB1O15117 783 aa14.36□□□□□ -0.11
PTPN21-205ENST00000554270 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
PTPN21-205ENST00000554270 TXNDC2Q86VQ3 553 aa14.35□□□□□ -0.11
PTPN21-205ENST00000554270 EMILIN1Q9Y6C2 1016 aa14.35□□□□□ -0.11
PTPN21-205ENST00000554270 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
PTPN21-205ENST00000554270 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
PTPN21-205ENST00000554270 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
PTPN21-205ENST00000554270 NOL8Q76FK4 1167 aaKnown RBP14.34□□□□□ -0.11
PTPN21-205ENST00000554270 ATP7AQ04656 1500 aa14.34□□□□□ -0.11
PTPN21-205ENST00000554270 IQGAP3Q86VI3 1631 aa14.34□□□□□ -0.11
PTPN21-205ENST00000554270 PANK2Q9BZ23 570 aa14.34□□□□□ -0.11
PTPN21-205ENST00000554270 PTPRTO14522 1441 aa14.34□□□□□ -0.11
PTPN21-205ENST00000554270 ABCC1P33527 1531 aa14.34□□□□□ -0.11
PTPN21-205ENST00000554270 POLR3AO14802 1390 aaPredicted RBP14.34□□□□□ -0.11
PTPN21-205ENST00000554270 TRAK2O60296 914 aa14.33□□□□□ -0.11
PTPN21-205ENST00000554270 CLTCL1P53675 1640 aa14.33□□□□□ -0.12
PTPN21-205ENST00000554270 UNC13BO14795 1591 aa14.33□□□□□ -0.12
PTPN21-205ENST00000554270 FOXD4L6Q3SYB3 417 aaPredicted RBP14.33□□□□□ -0.12
PTPN21-205ENST00000554270 FOXD4L3Q6VB84 417 aaPredicted RBP14.33□□□□□ -0.12
PTPN21-205ENST00000554270 ANP32BQ92688 251 aaKnown RBP14.33□□□□□ -0.12
PTPN21-205ENST00000554270 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
PTPN21-205ENST00000554270 FAM83GA6ND36 823 aa14.32□□□□□ -0.12
PTPN21-205ENST00000554270 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
PTPN21-205ENST00000554270 SLC4A10Q6U841 1118 aa14.32□□□□□ -0.12
PTPN21-205ENST00000554270 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
PTPN21-205ENST00000554270 ZCCHC11Q5TAX3 1644 aaKnown RBP14.32□□□□□ -0.12
PTPN21-205ENST00000554270 NME9Q86XW9 330 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 NECTIN2Q92692 538 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 ARID3AQ99856 593 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 RTEL1-TNFRSF6BF6WH68 1400 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 MCM4P33991 863 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 TBC1D32Q96NH3 1257 aa14.31□□□□□ -0.12
PTPN21-205ENST00000554270 NPATQ14207 1427 aa14.3□□□□□ -0.12
PTPN21-205ENST00000554270 E9PCH4 1651 aa14.3□□□□□ -0.12
PTPN21-205ENST00000554270 A0A1W2PP64 1363 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms