RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 SEPT12Q8IYM1 358 aa26.35■■□□□ 1.81
NEK9-204ENST00000554258 E9PCH4 1651 aa26.34■■□□□ 1.81
NEK9-204ENST00000554258 R3HDM1Q15032 1099 aaKnown RBP26.31■■□□□ 1.8
NEK9-204ENST00000554258 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
NEK9-204ENST00000554258 SLIT2O94813 1529 aa26.3■■□□□ 1.8
NEK9-204ENST00000554258 IQGAP3Q86VI3 1631 aa26.3■■□□□ 1.8
NEK9-204ENST00000554258 LOC105371045A0A1W2PR82 267 aa26.3■■□□□ 1.8
NEK9-204ENST00000554258 KRT27Q7Z3Y8 459 aa26.3■■□□□ 1.8
NEK9-204ENST00000554258 NPHP3Q7Z494 1330 aa26.29■■□□□ 1.8
NEK9-204ENST00000554258 VPS8Q8N3P4 1428 aa26.27■■□□□ 1.8
NEK9-204ENST00000554258 ADGRL2O95490 1459 aa26.27■■□□□ 1.8
NEK9-204ENST00000554258 PXDNQ92626 1479 aa26.25■■□□□ 1.79
NEK9-204ENST00000554258 IFFO2Q5TF58 517 aa26.25■■□□□ 1.79
NEK9-204ENST00000554258 XPCQ01831 940 aaPredicted RBP26.23■■□□□ 1.79
NEK9-204ENST00000554258 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
NEK9-204ENST00000554258 ZNF326Q5BKZ1 582 aaKnown RBP26.22■■□□□ 1.79
NEK9-204ENST00000554258 ESCO1Q5FWF5 840 aa26.21■■□□□ 1.79
NEK9-204ENST00000554258 CCDC9Q9Y3X0 531 aaKnown RBP26.21■■□□□ 1.79
NEK9-204ENST00000554258 RGPD1P0DJD0 1748 aa26.21■■□□□ 1.79
NEK9-204ENST00000554258 ONECUT3O60422 494 aaPredicted RBP26.19■■□□□ 1.78
NEK9-204ENST00000554258 VPS72Q15906 364 aa26.19■■□□□ 1.78
NEK9-204ENST00000554258 USP32Q8NFA0 1604 aa26.18■■□□□ 1.78
NEK9-204ENST00000554258 A0A0G2JS52 829 aa26.18■■□□□ 1.78
NEK9-204ENST00000554258 MYT1Q01538 1121 aa26.18■■□□□ 1.78
NEK9-204ENST00000554258 FOXO3O43524 673 aa26.17■■□□□ 1.78
NEK9-204ENST00000554258 ROBO2Q9HCK4 1378 aa26.17■■□□□ 1.78
NEK9-204ENST00000554258 DCAF8L1A6NGE4 600 aa26.16■■□□□ 1.78
NEK9-204ENST00000554258 LRPPRCP42704 1394 aaKnown RBP26.14■■□□□ 1.78
NEK9-204ENST00000554258 PLCH1Q4KWH8 1693 aa26.14■■□□□ 1.78
NEK9-204ENST00000554258 NWD2Q9ULI1 1742 aa26.14■■□□□ 1.77
NEK9-204ENST00000554258 HAP1P54257 671 aaPredicted RBP26.1■■□□□ 1.77
NEK9-204ENST00000554258 SENP3-EIF4A1A0A087X0R7 540 aa26.09■■□□□ 1.77
NEK9-204ENST00000554258 CDC42BPGQ6DT37 1551 aa26.08■■□□□ 1.77
NEK9-204ENST00000554258 HFM1A2PYH4 1435 aa26.08■■□□□ 1.77
NEK9-204ENST00000554258 DISP2A7MBM2 1401 aa26.08■■□□□ 1.77
NEK9-204ENST00000554258 NEXMIFQ5QGS0 1516 aa26.08■■□□□ 1.77
NEK9-204ENST00000554258 TNS1Q9HBL0 1735 aaKnown RBP26.08■■□□□ 1.76
NEK9-204ENST00000554258 SPATA31A3Q5VYP0 1347 aa26.07■■□□□ 1.76
NEK9-204ENST00000554258 EZH2Q15910 746 aaKnown RBP26.06■■□□□ 1.76
NEK9-204ENST00000554258 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
NEK9-204ENST00000554258 PPP1R1BQ9UD71 204 aaPredicted RBP26.04■■□□□ 1.76
NEK9-204ENST00000554258 FAM182BQ5T319 152 aa26.03■■□□□ 1.76
NEK9-204ENST00000554258 PRAG1Q86YV5 1406 aa26.03■■□□□ 1.76
NEK9-204ENST00000554258 FAM50AQ14320 339 aaKnown RBP26.01■■□□□ 1.75
NEK9-204ENST00000554258 ADGRB2O60241 1585 aa26■■□□□ 1.75
NEK9-204ENST00000554258 NUP155O75694 1391 aa26■■□□□ 1.75
NEK9-204ENST00000554258 PLEKHG5O94827 1062 aa26■■□□□ 1.75
NEK9-204ENST00000554258 NUTM2FA1L443 756 aa25.99■■□□□ 1.75
NEK9-204ENST00000554258 CCDC144AA2RUR9 1427 aa25.98■■□□□ 1.75
NEK9-204ENST00000554258 NINLQ9Y2I6 1382 aa25.98■■□□□ 1.75
NEK9-204ENST00000554258 ZNF784Q8NCA9 323 aaPredicted RBP25.98■■□□□ 1.75
NEK9-204ENST00000554258 CABLES1Q8TDN4 633 aa25.98■■□□□ 1.75
NEK9-204ENST00000554258 APLP2Q06481 763 aa25.97■■□□□ 1.75
NEK9-204ENST00000554258 CAMKK2Q96RR4 588 aa25.97■■□□□ 1.75
NEK9-204ENST00000554258 CAMTA1Q9Y6Y1 1673 aa25.96■■□□□ 1.75
NEK9-204ENST00000554258 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
NEK9-204ENST00000554258 ABCA3Q99758 1704 aa25.95■■□□□ 1.74
NEK9-204ENST00000554258 NRAPQ86VF7 1730 aa25.94■■□□□ 1.74
NEK9-204ENST00000554258 UTRNP46939 3433 aa25.94■■□□□ 1.74
NEK9-204ENST00000554258 KIF1BO60333 1816 aa25.94■■□□□ 1.74
NEK9-204ENST00000554258 KRT28Q7Z3Y7 464 aa25.94■■□□□ 1.74
NEK9-204ENST00000554258 SPON1Q9HCB6 807 aa25.94■■□□□ 1.74
NEK9-204ENST00000554258 NAIPQ13075 1403 aa25.94■■□□□ 1.74
NEK9-204ENST00000554258 CLTCL1P53675 1640 aa25.92■■□□□ 1.74
NEK9-204ENST00000554258 PARD3Q8TEW0 1356 aa25.92■■□□□ 1.74
NEK9-204ENST00000554258 TNS3Q68CZ2 1445 aa25.91■■□□□ 1.74
NEK9-204ENST00000554258 FAM83GA6ND36 823 aa25.91■■□□□ 1.74
NEK9-204ENST00000554258 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
NEK9-204ENST00000554258 C1QTNF8P60827 252 aa25.9■■□□□ 1.74
NEK9-204ENST00000554258 RREB1Q92766 1687 aa25.9■■□□□ 1.74
NEK9-204ENST00000554258 TRIM37O94972 964 aa25.89■■□□□ 1.74
NEK9-204ENST00000554258 NBPF8Q3BBV2 869 aa25.89■■□□□ 1.74
NEK9-204ENST00000554258 NBPF14Q5TI25 921 aa25.89■■□□□ 1.74
NEK9-204ENST00000554258 NUP188Q5SRE5 1749 aa25.88■■□□□ 1.73
NEK9-204ENST00000554258 APBA3O96018 575 aa25.88■■□□□ 1.73
NEK9-204ENST00000554258 CEP350Q5VT06 3117 aa25.87■■□□□ 1.73
NEK9-204ENST00000554258 KCNQ2O43526 872 aa25.87■■□□□ 1.73
NEK9-204ENST00000554258 LMOD2Q6P5Q4 547 aa25.87■■□□□ 1.73
NEK9-204ENST00000554258 FMN2Q9NZ56 1722 aa25.86■■□□□ 1.73
NEK9-204ENST00000554258 BTG4Q9NY30 223 aa25.86■■□□□ 1.73
NEK9-204ENST00000554258 THSD7AQ9UPZ6 1657 aa25.86■■□□□ 1.73
NEK9-204ENST00000554258 PSME1Q06323 249 aa25.85■■□□□ 1.73
NEK9-204ENST00000554258 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
NEK9-204ENST00000554258 ARHGEF10O15013 1369 aa25.82■■□□□ 1.72
NEK9-204ENST00000554258 CHD4Q14839 1912 aa25.82■■□□□ 1.72
NEK9-204ENST00000554258 SPATA31A5Q5VU36 1347 aa25.82■■□□□ 1.72
NEK9-204ENST00000554258 SPATA31A7Q8IWB4 1347 aa25.82■■□□□ 1.72
NEK9-204ENST00000554258 RGPD8O14715 1765 aaPredicted RBP25.81■■□□□ 1.72
NEK9-204ENST00000554258 COL14A1Q05707 1796 aaKnown RBP25.8■■□□□ 1.72
NEK9-204ENST00000554258 WAPLQ7Z5K2 1190 aa25.8■■□□□ 1.72
NEK9-204ENST00000554258 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
NEK9-204ENST00000554258 SBNO1A3KN83 1393 aa25.79■■□□□ 1.72
NEK9-204ENST00000554258 STK26Q9P289 416 aa25.76■■□□□ 1.71
NEK9-204ENST00000554258 PHF8Q9UPP1 1060 aa25.76■■□□□ 1.71
NEK9-204ENST00000554258 PPLO60437 1756 aa25.74■■□□□ 1.71
NEK9-204ENST00000554258 IFT172Q9UG01 1749 aa25.72■■□□□ 1.71
NEK9-204ENST00000554258 TECPR2O15040 1411 aa25.71■■□□□ 1.71
NEK9-204ENST00000554258 RPGRIP1LQ68CZ1 1315 aa25.71■■□□□ 1.71
NEK9-204ENST00000554258 NRKQ7Z2Y5 1582 aa25.71■■□□□ 1.71
NEK9-204ENST00000554258 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms